Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WIPF3 Sequence: fasta or formatted (483aa) NCBI GI: 122937496
Description:

WAS/WASL interacting protein family, member 3

Referenced in:

Cytoskeleton
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         45           2
 C cysteine            1.0          5           1
 D aspartate           2.9         14           2
 E glutamate           2.3         11           1
 F phenylalanine       1.7          8           1
 G glycine             7.9         38           3
 H histidine           1.0          5           1
 I isoleucine          2.5         12           2
 K lysine              4.6         22           2
 L leucine             7.9         38           2
 M methionine          0.2          1           1
 N asparagine          2.3         11           1
 P proline            28.2        136          10
 Q glutamine           5.0         24           2
 R arginine            4.6         22           2
 S serine              9.1         44           3
 T threonine           5.2         25           2
 V valine              3.3         16           2
 W tryptophan          0.4          2           1
 Y tyrosine            0.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAS/WASL interacting protein family, member 3 [Homo... 
WIPF2                 0.196   WIRE protein 
WIPF1                 0.176   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.176   WAS/WASL interacting protein family, member 1 
RAPH1                 0.133   Ras association and pleckstrin homology domains 1 is...
FMN2                  0.117   formin 2 
FLJ22184              0.114   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.113   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.106   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.103   nascent polypeptide-associated complex alpha subuni...
PRB2                  0.093   proline-rich protein BstNI subfamily 2 
MLL4                  0.089   myeloid/lymphoid or mixed-lineage leukemia 4 
DIAPH1                0.087   diaphanous 1 isoform 2 
DIAPH1                0.087   diaphanous 1 isoform 1 
PRB1                  0.087   proline-rich protein BstNI subfamily 1 isoform 1 pre...
BRD4                  0.085   bromodomain-containing protein 4 isoform long 
MUC2                  0.080   mucin 2 precursor 
CPSF6                 0.080   cleavage and polyadenylation specific factor 6, 68 ...
C6orf132              0.078   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.078   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.078   PREDICTED: hypothetical protein LOC647024 
CCNK                  0.078   cyclin K isoform 1 
WNK2                  0.076   WNK lysine deficient protein kinase 2 
KIAA1522              0.075   hypothetical protein LOC57648 
MLL2                  0.073   myeloid/lymphoid or mixed-lineage leukemia 2 
SF3A2                 0.073   splicing factor 3a, subunit 2 
PPRC1                 0.072   peroxisome proliferator-activated receptor gamma, co...
RERE                  0.072   atrophin-1 like protein isoform b 
RERE                  0.072   atrophin-1 like protein isoform a 
RERE                  0.072   atrophin-1 like protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press