Guide to the Human Genome
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Name: FLJ31945 Sequence: fasta or formatted (564aa) NCBI GI: 169206489
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {564aa} PREDICTED: hypothetical protein
alt prot {466aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         70           3
 C cysteine            2.1         12           1
 D aspartate           2.1         12           1
 E glutamate           3.2         18           3
 F phenylalanine       1.2          7           1
 G glycine            15.4         87           5
 H histidine           2.5         14           2
 I isoleucine          0.4          2           1
 K lysine              2.3         13           1
 L leucine             7.6         43           2
 M methionine          0.2          1           1
 N asparagine          0.9          5           1
 P proline            11.0         62           4
 Q glutamine           3.0         17           1
 R arginine           13.5         76           2
 S serine             11.5         65           2
 T threonine           5.3         30           2
 V valine              3.7         21           1
 W tryptophan          1.6          9           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ31945              1.000   PREDICTED: hypothetical protein 
FLJ31945              0.608   PREDICTED: hypothetical protein 
FLJ22184              0.035   PREDICTED: hypothetical protein LOC80164 
COL1A1                0.034   alpha 1 type I collagen preproprotein 
COL5A2                0.029   alpha 2 type V collagen preproprotein 
SRRM2                 0.029   splicing coactivator subunit SRm300 
NACA                  0.028   nascent polypeptide-associated complex alpha subuni...
DACT3                 0.028   thymus expressed gene 3-like 
LOC100292934          0.027   PREDICTED: hypothetical protein 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
COL3A1                0.026   collagen type III alpha 1 preproprotein 
SHANK1                0.026   SH3 and multiple ankyrin repeat domains 1 
PRR12                 0.026   proline rich 12 
LOC100131251          0.026   PREDICTED: hypothetical protein 
LOC100131251          0.026   PREDICTED: hypothetical protein 
HRNR                  0.025   hornerin 
LOC100289721          0.025   PREDICTED: hypothetical protein XP_002347280 
FLJ37078              0.025   hypothetical protein LOC222183 
LOC728307             0.025   PREDICTED: hypothetical protein 
LOC100287104          0.024   PREDICTED: hypothetical protein XP_002343630 
COL7A1                0.023   alpha 1 type VII collagen precursor 
TTMA                  0.023   hypothetical protein LOC645369 
COL1A2                0.023   alpha 2 type I collagen 
FLJ22184              0.022   PREDICTED: hypothetical protein FLJ22184 
LOC643355             0.022   PREDICTED: hypothetical protein 
LOC100291533          0.022   PREDICTED: hypothetical protein XP_002347080 
LOC100288002          0.022   PREDICTED: hypothetical protein XP_002342946 
COL2A1                0.022   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.022   collagen, type II, alpha 1 isoform 2 precursor [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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