Guide to the Human Genome
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Name: ANKRD33B Sequence: fasta or formatted (1006aa) NCBI GI: 113416996
Description:

PREDICTED: ankyrin repeat domain 33B

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [494aa] PREDICTED: ankyrin repeat domain 33B
alt prot [494aa] PREDICTED: ankyrin repeat domain 33B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1        112           2
 C cysteine            2.5         25           2
 D aspartate           4.0         40           2
 E glutamate           7.0         70           3
 F phenylalanine       1.9         19           3
 G glycine             9.6         97           3
 H histidine           1.9         19           1
 I isoleucine          1.3         13           2
 K lysine              3.5         35           2
 L leucine             7.2         72           3
 M methionine          0.8          8           1
 N asparagine          1.3         13           2
 P proline            12.1        122           4
 Q glutamine           5.0         50           2
 R arginine           11.5        116           3
 S serine              7.1         71           2
 T threonine           4.8         48           2
 V valine              5.3         53           3
 W tryptophan          1.3         13           2
 Y tyrosine            1.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.439   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.439   PREDICTED: ankyrin repeat domain 33B 
ANKRD33               0.100   ankyrin repeat domain 33 isoform 2 
ANKRD33               0.092   ankyrin repeat domain 33 isoform 1 
ANKRD50               0.024   ankyrin repeat domain 50 
PRB1                  0.024   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.023   proline-rich protein BstNI subfamily 2 
FEM1A                 0.022   fem-1 homolog a 
ANKDD1A               0.022   ankyrin repeat and death domain containing 1A 
PRB3                  0.021   proline-rich protein BstNI subfamily 3 precursor [H...
SAMD1                 0.020   sterile alpha motif domain containing 1 
FMN2                  0.020   formin 2 
LOC100131244          0.020   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.020   PREDICTED: similar to kinase D-interacting substrat...
KIDINS220             0.020   kinase D-interacting substrate of 220 kDa 
ANKHD1                0.020   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.020   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.020   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.020   ANKHD1-EIF4EBP3 protein 
ANKRD29               0.020   ankyrin repeat domain 29 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
LOC100287484          0.019   PREDICTED: hypothetical protein XP_002343105 
LOC100131244          0.019   PREDICTED: similar to kinase D-interacting substrat...
RAI14                 0.019   retinoic acid induced 14 isoform d 
RAI14                 0.019   retinoic acid induced 14 isoform c 
RAI14                 0.019   retinoic acid induced 14 isoform b 
RAI14                 0.019   retinoic acid induced 14 isoform a 
RAI14                 0.019   retinoic acid induced 14 isoform a 
RAI14                 0.019   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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