| Name: LOC100288194 | Sequence: fasta or formatted (500aa) | NCBI GI: 239745851 | |
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Description: PREDICTED: hypothetical protein XP_002343605
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.4 52 2 C cysteine 3.6 18 2 D aspartate 1.8 9 2 E glutamate 4.6 23 2 F phenylalanine 1.4 7 1 G glycine 10.2 51 2 H histidine 2.0 10 1 I isoleucine 1.2 6 1 K lysine 3.0 15 2 L leucine 10.2 51 3 M methionine 2.6 13 1 N asparagine 1.4 7 1 P proline 9.8 49 3 Q glutamine 3.2 16 1 R arginine 9.6 48 2 S serine 13.0 65 3 T threonine 5.0 25 2 V valine 4.0 20 2 W tryptophan 2.6 13 1 Y tyrosine 0.4 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343605 LOC100291129 0.894 PREDICTED: hypothetical protein XP_002347815 LOC100294343 0.894 PREDICTED: hypothetical protein XP_002344111 LOC100293513 0.863 PREDICTED: hypothetical protein GATA5 0.021 GATA binding protein 5 COL4A3 0.020 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.020 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.020 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.020 alpha 3 type IV collagen isoform 1 precursor COL7A1 0.019 alpha 1 type VII collagen precursor COL5A1 0.018 alpha 1 type V collagen preproprotein COL4A5 0.017 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.017 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.017 type IV collagen alpha 5 isoform 3 precursor GLTSCR1 0.016 glioma tumor suppressor candidate region gene 1 [Ho... COL3A1 0.016 collagen type III alpha 1 preproprotein LOC100293055 0.016 PREDICTED: similar to COL22A1 protein COL6A1 0.016 collagen, type VI, alpha 1 precursor COL16A1 0.016 alpha 1 type XVI collagen precursor COL22A1 0.016 collagen, type XXII, alpha 1 COL9A2 0.015 alpha 2 type IX collagen COL2A1 0.015 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.015 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A1 0.015 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.015 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.015 alpha 1 type XI collagen isoform A preproprotein [Ho... COL21A1 0.015 collagen, type XXI, alpha 1 precursor COL9A1 0.015 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.015 alpha 1 type IX collagen isoform 2 precursor COLQ 0.014 acetylcholinesterase collagen-like tail subunit iso...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
