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Search of human proteins with 239744423
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744423 PREDICTED: similar to actin [Homo sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal musc... 275 1e-74
gi|239744423 PREDICTED: similar to actin [Homo sapiens] 275 1e-74
gi|239755640 PREDICTED: similar to alpha actin [Homo sapiens] 227 2e-60
gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens] 105 1e-23
gi|4501885 beta actin [Homo sapiens] 105 1e-23
gi|4501887 actin, gamma 1 propeptide [Homo sapiens] 105 1e-23
gi|4501883 alpha 2 actin [Homo sapiens] 104 2e-23
gi|213688375 alpha 2 actin [Homo sapiens] 104 2e-23
gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens] 104 2e-23
gi|4501889 actin, gamma 2 propeptide [Homo sapiens] 103 3e-23
gi|29893808 actin-related protein M2 [Homo sapiens] 101 1e-22
gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens] 100 3e-22
gi|63055057 actin, beta-like 2 [Homo sapiens] 100 3e-22
gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens] 99 7e-22
gi|239741786 PREDICTED: kappa-actin [Homo sapiens] 99 7e-22
gi|19923076 actin-related protein T1 [Homo sapiens] 99 7e-22
gi|239741769 PREDICTED: similar to protein expressed in prostate... 99 1e-21
gi|88953571 PREDICTED: similar to protein expressed in prostate,... 99 1e-21
gi|134133226 protein expressed in prostate, ovary, testis, and p... 98 2e-21
gi|113413200 PREDICTED: similar to protein expressed in prostate... 98 2e-21
gi|153791352 prostate, ovary, testis expressed protein on chromo... 96 8e-21
gi|5031569 ARP1 actin-related protein 1 homolog A, centractin al... 88 2e-18
gi|11342680 ARP1 actin-related protein 1 homolog B, centractin b... 88 2e-18
gi|221139714 actin related protein M1 [Homo sapiens] 86 7e-18
gi|169160859 PREDICTED: similar to actin, gamma 1 [Homo sapiens] 79 1e-15
gi|7705294 actin-like 6B [Homo sapiens] 77 5e-15
gi|30089999 actin-like 6A isoform 2 [Homo sapiens] 75 1e-14
gi|30089997 actin-like 6A isoform 2 [Homo sapiens] 75 1e-14
gi|4757718 actin-like 6A isoform 1 [Homo sapiens] 75 1e-14
gi|169213772 PREDICTED: similar to actin alpha 1 skeletal muscle... 74 4e-14
>gi|239750113 PREDICTED: similar to Actin, alpha 1, skeletal muscle
[Homo sapiens]
Length = 420
Score = 275 bits (702), Expect = 1e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT 60
MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT
Sbjct: 289 MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT 348
Query: 61 GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK 120
GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK
Sbjct: 349 GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK 408
Query: 121 EMGSSIISRKSF 132
EMGSSIISRKSF
Sbjct: 409 EMGSSIISRKSF 420
>gi|239744423 PREDICTED: similar to actin [Homo sapiens]
Length = 132
Score = 275 bits (702), Expect = 1e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT 60
MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT
Sbjct: 1 MEKQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGT 60
Query: 61 GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK 120
GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK
Sbjct: 61 GSCPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYK 120
Query: 121 EMGSSIISRKSF 132
EMGSSIISRKSF
Sbjct: 121 EMGSSIISRKSF 132
>gi|239755640 PREDICTED: similar to alpha actin [Homo sapiens]
Length = 369
Score = 227 bits (579), Expect = 2e-60
Identities = 112/130 (86%), Positives = 117/130 (90%), Gaps = 3/130 (2%)
Query: 3 KQVFPGVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGS 62
+++ G + F C RG +GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGS
Sbjct: 243 QEITVGQESFFC---PEARGTEGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGS 299
Query: 63 CPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEM 122
CPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEM
Sbjct: 300 CPGLRFRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEM 359
Query: 123 GSSIISRKSF 132
G SIISRKSF
Sbjct: 360 GPSIISRKSF 369
>gi|4501881 actin, alpha 1, skeletal muscle [Homo sapiens]
Length = 377
Score = 105 bits (262), Expect = 1e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + ++SGGT PG+
Sbjct: 253 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIA 312
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW+T +EY E G SI+
Sbjct: 313 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIV 372
Query: 128 SRKSF 132
RK F
Sbjct: 373 HRKCF 377
>gi|4501885 beta actin [Homo sapiens]
Length = 375
Score = 105 bits (262), Expect = 1e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 251 GNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 310
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 311 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 370
Query: 128 SRKSF 132
RK F
Sbjct: 371 HRKCF 375
>gi|4501887 actin, gamma 1 propeptide [Homo sapiens]
Length = 375
Score = 105 bits (262), Expect = 1e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 251 GNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 310
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 311 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 370
Query: 128 SRKSF 132
RK F
Sbjct: 371 HRKCF 375
>gi|4501883 alpha 2 actin [Homo sapiens]
Length = 377
Score = 104 bits (260), Expect = 2e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 253 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIA 312
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 313 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIV 372
Query: 128 SRKSF 132
RK F
Sbjct: 373 HRKCF 377
>gi|213688375 alpha 2 actin [Homo sapiens]
Length = 377
Score = 104 bits (260), Expect = 2e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 253 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIA 312
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 313 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIV 372
Query: 128 SRKSF 132
RK F
Sbjct: 373 HRKCF 377
>gi|4885049 cardiac muscle alpha actin 1 proprotein [Homo sapiens]
Length = 377
Score = 104 bits (260), Expect = 2e-23
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 253 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIA 312
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 313 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIV 372
Query: 128 SRKSF 132
RK F
Sbjct: 373 HRKCF 377
>gi|4501889 actin, gamma 2 propeptide [Homo sapiens]
Length = 376
Score = 103 bits (258), Expect = 3e-23
Identities = 53/125 (42%), Positives = 72/125 (57%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G + F C Q G + GIH SI C+ D++K L+ + +LSGGT PG+
Sbjct: 252 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIA 311
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L T+ +K+ P Y W+GGSIL SLSTF+ MW++ EY E G SI+
Sbjct: 312 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIV 371
Query: 128 SRKSF 132
RK F
Sbjct: 372 HRKCF 376
>gi|29893808 actin-related protein M2 [Homo sapiens]
Length = 377
Score = 101 bits (252), Expect = 1e-22
Identities = 45/108 (41%), Positives = 69/108 (63%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G +PG+ SIT C+ D+QK+LFG ++LSGGT GL R+ +E+ +L S +
Sbjct: 270 GSQSPGLSNMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPI 329
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
K+ P + W+G SI+ SLS+FK MWVT+ ++KE G+S++ R+ F
Sbjct: 330 KITAPPDRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF 377
>gi|239753333 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 100 bits (249), Expect = 3e-22
Identities = 48/108 (44%), Positives = 67/108 (62%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K ++ + +LSGGT PG+ RMQ+EI+ L T+ +
Sbjct: 817 GMESCGIHKTTFNSIVKSDVDIRKDVYTNTVLSGGTTMYPGIAHRMQKEITALAPSTMKI 876
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
K+ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK F
Sbjct: 877 KIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 924
>gi|63055057 actin, beta-like 2 [Homo sapiens]
Length = 376
Score = 100 bits (249), Expect = 3e-22
Identities = 48/113 (42%), Positives = 67/113 (59%)
Query: 20 QRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVS 79
Q G + GIH SI C+ D++K L+ + +LSGG+ PG+ RMQ+EI L
Sbjct: 264 QPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIITLAP 323
Query: 80 PTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
T+ +K+ P Y W+GGSIL SLSTF+ MW++ +EY E G I+ RK F
Sbjct: 324 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376
>gi|239747898 PREDICTED: actin, beta-like 3 [Homo sapiens]
Length = 924
Score = 99.4 bits (246), Expect = 7e-22
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K L+ + +LSGGT PG+ RMQ+EI+ L + +
Sbjct: 817 GMESCGIHKTTFNSIVKSDVDIRKDLYTNTVLSGGTTMYPGIAHRMQKEITALAPSIMKI 876
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
K+ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK F
Sbjct: 877 KIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 924
>gi|239741786 PREDICTED: kappa-actin [Homo sapiens]
Length = 924
Score = 99.4 bits (246), Expect = 7e-22
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K L+ + +LSGGT PG+ RMQ+EI+ L + +
Sbjct: 817 GMESCGIHKTTFNSIVKSDVDIRKDLYTNTVLSGGTTMYPGIAHRMQKEITALAPSIMKI 876
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
K+ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK F
Sbjct: 877 KIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 924
>gi|19923076 actin-related protein T1 [Homo sapiens]
Length = 376
Score = 99.4 bits (246), Expect = 7e-22
Identities = 43/108 (39%), Positives = 68/108 (62%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G ++PG+ SI C+ D+Q L+ ++LSGGT PGL R+ +E+ +L S +
Sbjct: 269 GIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPI 328
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
K+ P + AW+G SI+ S+S+FK MWVTS ++KE G+S++ R+ F
Sbjct: 329 KITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376
>gi|239741769 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 952
Score = 99.0 bits (245), Expect = 1e-21
Identities = 51/125 (40%), Positives = 72/125 (57%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G ++F C Q G + GIH SI + D++K L+ + +LSGGT PG+
Sbjct: 828 GNEWFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMA 887
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L + +++ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 888 HRMQKEIAALAPSMLKIRIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIV 947
Query: 128 SRKSF 132
RK F
Sbjct: 948 HRKCF 952
>gi|88953571 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 isoform 2 [Homo sapiens]
Length = 1075
Score = 99.0 bits (245), Expect = 1e-21
Identities = 51/125 (40%), Positives = 72/125 (57%)
Query: 8 GVQFFICYLHKGQRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLR 67
G ++F C Q G + GIH SI + D++K L+ + +LSGGT PG+
Sbjct: 951 GNEWFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMA 1010
Query: 68 FRMQREISELVSPTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
RMQ+EI+ L + +++ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+
Sbjct: 1011 HRMQKEIAALAPSMLKIRIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIV 1070
Query: 128 SRKSF 132
RK F
Sbjct: 1071 HRKCF 1075
>gi|134133226 protein expressed in prostate, ovary, testis, and
placenta 2 [Homo sapiens]
Length = 1075
Score = 97.8 bits (242), Expect = 2e-21
Identities = 47/108 (43%), Positives = 66/108 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K L+ + +LSGGT PG+ RMQ+EI+ L + +
Sbjct: 968 GMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMMKI 1027
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
++ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK F
Sbjct: 1028 RIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1075
>gi|113413200 PREDICTED: similar to protein expressed in prostate,
ovary, testis, and placenta 2 [Homo sapiens]
Length = 1038
Score = 97.8 bits (242), Expect = 2e-21
Identities = 47/108 (43%), Positives = 66/108 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K L+ + +LSGGT PG+ RMQ+EI+ L + +
Sbjct: 931 GMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMMKI 990
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
++ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK F
Sbjct: 991 RIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1038
>gi|153791352 prostate, ovary, testis expressed protein on chromosome
2 [Homo sapiens]
Length = 1075
Score = 95.9 bits (237), Expect = 8e-21
Identities = 46/106 (43%), Positives = 65/106 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G + GIH SI + D++K L+ + +LSGGT PG+ RMQ+EI+ L + +
Sbjct: 968 GMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMMKI 1027
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRK 130
++ P Y WVGGSIL SLSTF+ MW++ +EY E G SI+ RK
Sbjct: 1028 RIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRK 1073
>gi|5031569 ARP1 actin-related protein 1 homolog A, centractin alpha
[Homo sapiens]
Length = 376
Score = 87.8 bits (216), Expect = 2e-18
Identities = 42/108 (38%), Positives = 66/108 (61%)
Query: 25 GKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYV 84
G+ + GIH + +I + DL++ LF +++LSGG+ G R+ E+ +L V +
Sbjct: 269 GEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKI 328
Query: 85 KVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
+++ +Y W+GGSIL SL TFK MWV+ KEY+E G+ I RK+F
Sbjct: 329 RISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376
>gi|11342680 ARP1 actin-related protein 1 homolog B, centractin beta
[Homo sapiens]
Length = 376
Score = 87.8 bits (216), Expect = 2e-18
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 20 QRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVS 79
Q + G + G+H +I + DL++ LF +++LSGG+ G R+ E+ +L
Sbjct: 264 QPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAP 323
Query: 80 PTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
+ +K++ +Y W+GGSIL SL TFK MWV+ KEY+E GS I RK+F
Sbjct: 324 KDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
>gi|221139714 actin related protein M1 [Homo sapiens]
Length = 372
Score = 86.3 bits (212), Expect = 7e-18
Identities = 40/104 (38%), Positives = 64/104 (61%)
Query: 29 PGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYVKVAT 88
PGI SI C+ L+ F +++L+GG+ S PGL R+ ++I+++ V+V
Sbjct: 269 PGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIA 328
Query: 89 CPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
P W+GGSIL SLS F+DMW+T+ E+KE+G +I+ ++ F
Sbjct: 329 PPERKISVWMGGSILASLSAFQDMWITAAEFKEVGPNIVHQRCF 372
>gi|169160859 PREDICTED: similar to actin, gamma 1 [Homo sapiens]
Length = 152
Score = 78.6 bits (192), Expect = 1e-15
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 20 QRGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVS 79
Q G + G H I C+ D+ K L+ + +LS GT P + RMQ+ I+ L
Sbjct: 40 QSSFLGMESCGTHKTTFNCIMKCDVDIFKDLYANTVLSSGTTMYPDITNRMQKAITALAP 99
Query: 80 PTVYVKVATCPYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRKSF 132
T+ +K+ Y W+GGSIL SLSTF+ M + +EY ++G S + K F
Sbjct: 100 STMKIKIIAPRERKYSVWIGGSILTSLSTFQQMCTSKQEYDKLGPSTVHHKCF 152
>gi|7705294 actin-like 6B [Homo sapiens]
Length = 426
Score = 76.6 bits (187), Expect = 5e-15
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 21 RGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSP 80
+G+ G G+ SI C+ D++ L+G ++++GG G R+ RE+S+ P
Sbjct: 312 KGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPP 371
Query: 81 TVYVKVATCPYSV---YGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRK 130
++ +K+ ++ + W+GGSIL SL TF+ MW++ +EY+E G + RK
Sbjct: 372 SMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERK 424
>gi|30089999 actin-like 6A isoform 2 [Homo sapiens]
Length = 387
Score = 75.5 bits (184), Expect = 1e-14
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 21 RGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSP 80
+G+ G G+ S+ C+ D++ L+G ++++GG R+ RE+S+ P
Sbjct: 273 KGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPP 332
Query: 81 TVYVKVATCPYSV---YGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRK 130
++ +K+ +V + +W+GGSIL SL TF+ MW++ +EY+E G + RK
Sbjct: 333 SMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERK 385
>gi|30089997 actin-like 6A isoform 2 [Homo sapiens]
Length = 387
Score = 75.5 bits (184), Expect = 1e-14
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 21 RGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSP 80
+G+ G G+ S+ C+ D++ L+G ++++GG R+ RE+S+ P
Sbjct: 273 KGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPP 332
Query: 81 TVYVKVATCPYSV---YGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRK 130
++ +K+ +V + +W+GGSIL SL TF+ MW++ +EY+E G + RK
Sbjct: 333 SMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERK 385
>gi|4757718 actin-like 6A isoform 1 [Homo sapiens]
Length = 429
Score = 75.5 bits (184), Expect = 1e-14
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 21 RGIKGKNTPGIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSP 80
+G+ G G+ S+ C+ D++ L+G ++++GG R+ RE+S+ P
Sbjct: 315 KGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPP 374
Query: 81 TVYVKVATCPYSV---YGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSIISRK 130
++ +K+ +V + +W+GGSIL SL TF+ MW++ +EY+E G + RK
Sbjct: 375 SMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERK 427
>gi|169213772 PREDICTED: similar to actin alpha 1 skeletal muscle
protein [Homo sapiens]
Length = 464
Score = 73.6 bits (179), Expect = 4e-14
Identities = 36/98 (36%), Positives = 54/98 (55%)
Query: 30 GIHTKAIQSITSCNPDLQKVLFGHMLLSGGTGSCPGLRFRMQREISELVSPTVYVKVATC 89
GIH + SI C+ D+ K L + +LS T G+ RM+ EI+ + + +
Sbjct: 342 GIHETTLNSIMKCDIDICKDLDANPVLSSDTTMYAGIADRMEEEITTMAPSMKKINIIAP 401
Query: 90 PYSVYGAWVGGSILCSLSTFKDMWVTSKEYKEMGSSII 127
P Y W+ GSIL SLS F+ MW++ +EY+E G SI+
Sbjct: 402 PEHKYSVWISGSILVSLSPFQQMWISKQEYEESGLSIV 439
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,255,988
Number of Sequences: 37866
Number of extensions: 208137
Number of successful extensions: 464
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 404
Number of HSP's gapped (non-prelim): 49
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.