LOC100128069 20268

Name: LOC100128069	Sequence: fasta or formatted (420aa)		NCBI GI: 239750113
Description: PREDICTED: similar to Actin, alpha 1, skeletal muscle		Not currently referenced in the text
Other entries for this name: alt prot {132aa} PREDICTED: similar to actin alt prot {369aa} PREDICTED: similar to alpha actin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 12 1 C cysteine 2.9 12 2 D aspartate 4.5 19 1 E glutamate 6.7 28 3 F phenylalanine 5.0 21 2 G glycine 9.8 41 2 H histidine 2.1 9 2 I isoleucine 5.2 22 2 K lysine 6.2 26 2 L leucine 8.3 35 2 M methionine 4.0 17 1 N asparagine 2.4 10 1 P proline 5.5 23 1 Q glutamine 5.2 22 2 R arginine 2.4 10 1 S serine 7.6 32 2 T threonine 6.2 26 3 V valine 7.4 31 1 W tryptophan 1.4 6 1 X unknown 0.2 1 1 Y tyrosine 4.0 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Actin, alpha 1, skeletal musc... LOC100128069 0.828 PREDICTED: similar to alpha actin ACTA2 0.412 alpha 2 actin ACTA2 0.412 alpha 2 actin ACTA1 0.407 actin, alpha 1, skeletal muscle ACTG2 0.407 actin, gamma 2 propeptide ACTC1 0.406 cardiac muscle alpha actin 1 proprotein ACTB 0.402 beta actin ACTG1 0.401 actin, gamma 1 propeptide ACTBL2 0.389 actin, beta-like 2 ACTBL3 0.386 PREDICTED: actin, beta-like 3 ACTBL3 0.386 PREDICTED: kappa-actin ACTBL3 0.382 PREDICTED: actin, beta-like 3 LOC653269 0.382 PREDICTED: similar to protein expressed in prostate... LOC653269 0.382 PREDICTED: similar to protein expressed in prostate,... LOC653781 0.376 PREDICTED: similar to protein expressed in prostate... POTEF 0.376 prostate, ovary, testis expressed protein on chromo... POTEE 0.374 protein expressed in prostate, ovary, testis, and p... LOC100128069 0.297 PREDICTED: similar to actin ACTRT2 0.279 actin-related protein M2 ACTR1B 0.278 ARP1 actin-related protein 1 homolog B, centractin b... ACTRT1 0.275 actin-related protein T1 ARPM1 0.270 actin related protein M1 ACTR1A 0.269 ARP1 actin-related protein 1 homolog A, centractin al... ACTL7A 0.237 actin-like 7A ACTL9 0.222 actin-like 9 ACTR2 0.218 actin-related protein 2 isoform b ACTL7B 0.215 actin-like 7B ACTR2 0.211 actin-related protein 2 isoform a ACTR3B 0.158 actin-related protein 3-beta isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.