ACTRT1 11606

Name: ACTRT1	Sequence: fasta or formatted (376aa)		NCBI GI: 19923076
Description: actin-related protein T1		Referenced in: Actin and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 25 2 C cysteine 2.7 10 1 D aspartate 4.0 15 2 E glutamate 6.9 26 2 F phenylalanine 4.8 18 1 G glycine 7.7 29 2 H histidine 3.2 12 1 I isoleucine 5.1 19 1 K lysine 5.9 22 1 L leucine 10.9 41 2 M methionine 3.2 12 2 N asparagine 2.9 11 2 P proline 5.6 21 1 Q glutamine 2.7 10 2 R arginine 4.0 15 2 S serine 7.4 28 3 T threonine 4.5 17 2 V valine 7.7 29 2 W tryptophan 1.1 4 1 Y tyrosine 3.2 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin-related protein T1 ACTRT2 0.746 actin-related protein M2 ACTB 0.472 beta actin ACTG1 0.471 actin, gamma 1 propeptide ACTA2 0.464 alpha 2 actin ACTA2 0.464 alpha 2 actin ACTG2 0.464 actin, gamma 2 propeptide ACTA1 0.460 actin, alpha 1, skeletal muscle ACTC1 0.459 cardiac muscle alpha actin 1 proprotein ACTBL2 0.456 actin, beta-like 2 ACTBL3 0.441 PREDICTED: actin, beta-like 3 ACTBL3 0.441 PREDICTED: kappa-actin POTEE 0.440 protein expressed in prostate, ovary, testis, and p... LOC653269 0.440 PREDICTED: similar to protein expressed in prostate... LOC653269 0.440 PREDICTED: similar to protein expressed in prostate,... POTEF 0.439 prostate, ovary, testis expressed protein on chromo... ACTBL3 0.437 PREDICTED: actin, beta-like 3 LOC653781 0.436 PREDICTED: similar to protein expressed in prostate... ARPM1 0.424 actin related protein M1 ACTR1B 0.371 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.364 ARP1 actin-related protein 1 homolog A, centractin al... LOC100128069 0.325 PREDICTED: similar to alpha actin LOC100128069 0.313 PREDICTED: similar to Actin, alpha 1, skeletal musc... ACTR2 0.308 actin-related protein 2 isoform b ACTR2 0.305 actin-related protein 2 isoform a ACTL9 0.301 actin-like 9 ACTL7B 0.296 actin-like 7B ACTL7A 0.287 actin-like 7A ACTR3B 0.211 actin-related protein 3-beta isoform 1 ACTL6B 0.204 actin-like 6B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.