| Name: LOC100128069 | Sequence: fasta or formatted (132aa) | NCBI GI: 239744423 | |
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Description: PREDICTED: similar to actin
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {420aa} PREDICTED: similar to Actin, alpha 1, skeletal muscle alt prot {369aa} PREDICTED: similar to alpha actin | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 2.3 3 1 C cysteine 3.8 5 1 D aspartate 1.5 2 1 E glutamate 3.8 5 1 F phenylalanine 5.3 7 2 G glycine 10.6 14 2 H histidine 2.3 3 1 I isoleucine 6.8 9 2 K lysine 8.3 11 1 L leucine 6.8 9 2 M methionine 3.8 5 1 N asparagine 1.5 2 1 P proline 4.5 6 1 Q glutamine 4.5 6 1 R arginine 3.8 5 1 S serine 11.4 15 2 T threonine 6.1 8 1 V valine 7.6 10 1 W tryptophan 1.5 2 1 Y tyrosine 3.8 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to actin LOC100128069 1.000 PREDICTED: similar to Actin, alpha 1, skeletal musc... LOC100128069 0.808 PREDICTED: similar to alpha actin ACTA1 0.320 actin, alpha 1, skeletal muscle ACTB 0.320 beta actin ACTG1 0.320 actin, gamma 1 propeptide ACTA2 0.316 alpha 2 actin ACTA2 0.316 alpha 2 actin ACTC1 0.316 cardiac muscle alpha actin 1 proprotein ACTG2 0.312 actin, gamma 2 propeptide ACTRT2 0.304 actin-related protein M2 ACTBL3 0.300 PREDICTED: actin, beta-like 3 ACTBL2 0.300 actin, beta-like 2 ACTBL3 0.296 PREDICTED: actin, beta-like 3 ACTBL3 0.296 PREDICTED: kappa-actin ACTRT1 0.296 actin-related protein T1 LOC653269 0.296 PREDICTED: similar to protein expressed in prostate... LOC653269 0.296 PREDICTED: similar to protein expressed in prostate,... POTEE 0.292 protein expressed in prostate, ovary, testis, and p... LOC653781 0.292 PREDICTED: similar to protein expressed in prostate... POTEF 0.284 prostate, ovary, testis expressed protein on chromo... ACTR1A 0.252 ARP1 actin-related protein 1 homolog A, centractin al... ACTR1B 0.252 ARP1 actin-related protein 1 homolog B, centractin b... ARPM1 0.244 actin related protein M1 LOC646821 0.216 PREDICTED: similar to actin, gamma 1 ACTL6B 0.208 actin-like 6B ACTL6A 0.200 actin-like 6A isoform 2 ACTL6A 0.200 actin-like 6A isoform 2 ACTL6A 0.200 actin-like 6A isoform 1 LOC646048 0.196 PREDICTED: similar to actin alpha 1 skeletal muscle...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
