LOC646048 8906

Name: LOC646048	Sequence: fasta or formatted (464aa)		NCBI GI: 169213772
Description: PREDICTED: similar to actin alpha 1 skeletal muscle protein		Referenced in: Actin and Related Proteins
Other entries for this name: alt mRNA [464aa] PREDICTED: similar to actin alpha 1 skeletal muscle protein alt prot [378aa] PREDICTED: similar to cytoskeletal beta actin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 33 2 C cysteine 1.5 7 1 D aspartate 5.0 23 3 E glutamate 5.6 26 3 F phenylalanine 2.8 13 2 G glycine 5.8 27 1 H histidine 3.0 14 2 I isoleucine 6.7 31 2 K lysine 5.0 23 2 L leucine 7.5 35 2 M methionine 3.4 16 1 N asparagine 4.3 20 2 P proline 7.3 34 2 Q glutamine 3.7 17 2 R arginine 4.1 19 2 S serine 9.7 45 2 T threonine 7.1 33 2 V valine 6.2 29 2 W tryptophan 1.9 9 1 Y tyrosine 2.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to actin alpha 1 skeletal muscle... LOC646048 1.000 PREDICTED: similar to actin alpha 1 skeletal muscle... LOC646048 0.713 PREDICTED: similar to cytoskeletal beta actin [Homo... ACTB 0.240 beta actin ACTG1 0.235 actin, gamma 1 propeptide ACTBL3 0.232 PREDICTED: actin, beta-like 3 ACTBL3 0.232 PREDICTED: actin, beta-like 3 ACTBL3 0.232 PREDICTED: kappa-actin LOC653269 0.229 PREDICTED: similar to protein expressed in prostate... LOC653269 0.229 PREDICTED: similar to protein expressed in prostate,... LOC653781 0.228 PREDICTED: similar to protein expressed in prostate... POTEE 0.226 protein expressed in prostate, ovary, testis, and p... POTEF 0.226 prostate, ovary, testis expressed protein on chromo... ACTA2 0.224 alpha 2 actin ACTA2 0.224 alpha 2 actin ACTG2 0.223 actin, gamma 2 propeptide ACTA1 0.222 actin, alpha 1, skeletal muscle ACTC1 0.222 cardiac muscle alpha actin 1 proprotein ACTBL2 0.221 actin, beta-like 2 LOC100128069 0.142 PREDICTED: similar to Actin, alpha 1, skeletal musc... LOC100128069 0.138 PREDICTED: similar to alpha actin LOC646821 0.128 PREDICTED: similar to actin, gamma 1 ACTR1B 0.124 ARP1 actin-related protein 1 homolog B, centractin b... ACTR1A 0.121 ARP1 actin-related protein 1 homolog A, centractin al... ACTRT2 0.113 actin-related protein M2 ACTRT1 0.111 actin-related protein T1 ACTR2 0.093 actin-related protein 2 isoform b ARPM1 0.090 actin related protein M1 ACTR2 0.089 actin-related protein 2 isoform a ACTL7A 0.084 actin-like 7A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.