LOC100287833 17313

Name: LOC100287833	Sequence: fasta or formatted (59aa)		NCBI GI: 239742642
Description: PREDICTED: hypothetical protein XP_002342587		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 6 1 C cysteine 1.7 1 1 D aspartate 15.3 9 2 E glutamate 8.5 5 1 F phenylalanine 1.7 1 1 G glycine 5.1 3 1 H histidine 0.0 0 0 I isoleucine 10.2 6 1 K lysine 6.8 4 1 L leucine 10.2 6 1 M methionine 6.8 4 1 N asparagine 1.7 1 1 P proline 0.0 0 0 Q glutamine 0.0 0 0 R arginine 6.8 4 2 S serine 3.4 2 1 T threonine 6.8 4 1 V valine 3.4 2 1 W tryptophan 0.0 0 0 Y tyrosine 1.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342587 LOC100131531 1.000 PREDICTED: similar to hCG1644658 LOC100131531 1.000 PREDICTED: similar to hCG1644658 PSMC1 0.761 proteasome 26S ATPase subunit 1 LOC345645 0.685 PREDICTED: similar to hCG2002932 LOC345645 0.685 PREDICTED: similar to hCG2002932 LOC345645 0.685 PREDICTED: hypothetical protein LOC345645 PSMC3 0.272 proteasome 26S ATPase subunit 3 LOC652826 0.261 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.261 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.261 proteasome 26S ATPase subunit 4 isoform 1 PSMC5 0.250 proteasome 26S ATPase subunit 5 KATNA1 0.185 katanin p60 subunit A 1 SPATA5 0.185 spermatogenesis associated 5 PSMC2 0.174 proteasome 26S ATPase subunit 2 SPATA5L1 0.152 spermatogenesis associated 5-like 1 KATNAL1 0.141 katanin p60 subunit A-like 1 KATNAL1 0.141 katanin p60 subunit A-like 1 VCP 0.141 valosin-containing protein PSMC6 0.141 proteasome 26S ATPase subunit 6 ATAD2B 0.098 ATPase family, AAA domain containing 2B ATAD2 0.087 ATPase family, AAA domain containing 2 PEX1 0.076 peroxin1 PFKFB1 0.054 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase... ATAD1 0.043 ATPase family, AAA domain containing 1 SPG7 0.022 spastic paraplegia 7 isoform 1 AFG3L2 0.022 AFG3 ATPase family gene 3-like 2 FIGNL1 0.022 fidgetin-like 1 FIGNL1 0.022 fidgetin-like 1 UTP6 0.011 hepatocellular carcinoma-associated antigen 66 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.