Guide to the Human Genome
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Name: FAM164A Sequence: fasta or formatted (325aa) NCBI GI: 223555989
Description:

hypothetical protein LOC51101

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         23           2
 C cysteine            3.7         12           2
 D aspartate           2.8          9           1
 E glutamate           4.9         16           2
 F phenylalanine       2.8          9           2
 G glycine             9.2         30           2
 H histidine           2.2          7           1
 I isoleucine          4.3         14           1
 K lysine             10.5         34           2
 L leucine             5.5         18           2
 M methionine          0.6          2           1
 N asparagine          4.6         15           1
 P proline            11.1         36           6
 Q glutamine           3.1         10           1
 R arginine            6.2         20           2
 S serine              8.9         29           6
 T threonine           5.8         19           1
 V valine              4.0         13           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC51101 
FAM164B               0.232   hypothetical protein LOC153918 
FAM164C               0.056   chromosome 14 open reading frame 140 isoform a [Hom...
WIPF2                 0.023   WIRE protein 
NISCH                 0.021   nischarin 
ABL1                  0.021   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.021   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ZNF474                0.021   zinc finger protein 474 
KIAA1217              0.020   sickle tail isoform 3 
KIAA1217              0.020   sickle tail isoform 2 
LOC728460             0.017   PREDICTED: hypothetical protein 
CASKIN1               0.017   CASK interacting protein 1 
LOC728460             0.017   PREDICTED: hypothetical protein 
LOC728460             0.017   PREDICTED: hypothetical protein 
AFF4                  0.017   ALL1 fused gene from 5q31 
MUPCDH                0.017   mucin and cadherin-like isoform 1 
MLLT1                 0.015   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ZFAT                  0.015   zinc finger protein 406 isoform ZFAT-1 
ZFAT                  0.015   zinc finger protein 406 isoform TR-ZFAT 
KANK3                 0.015   ankyrin repeat domain 47 
LOC100289782          0.015   PREDICTED: hypothetical protein XP_002347588 
MLL3                  0.015   myeloid/lymphoid or mixed-lineage leukemia 3 
ZFHX4                 0.015   zinc finger homeodomain 4 
BRSK1                 0.015   BR serine/threonine kinase 1 
PRB2                  0.015   proline-rich protein BstNI subfamily 2 
BAHD1                 0.015   bromo adjacent homology domain containing 1 
LOC100134147          0.014   PREDICTED: hypothetical protein 
ZNF385B               0.014   zinc finger protein 385B isoform 3 
ZNF385B               0.014   zinc finger protein 385B isoform 2 
ZNF385B               0.014   zinc finger protein 385B isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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