Guide to the Human Genome
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Name: MLLT1 Sequence: fasta or formatted (559aa) NCBI GI: 21361272
Description:

myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1

Referenced in:

PHD Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         29           2
 C cysteine            1.3          7           1
 D aspartate           5.5         31           2
 E glutamate           9.8         55           2
 F phenylalanine       3.8         21           1
 G glycine             4.3         24           2
 H histidine           2.1         12           1
 I isoleucine          1.3          7           1
 K lysine             10.6         59           2
 L leucine             6.1         34           2
 M methionine          1.6          9           1
 N asparagine          3.2         18           2
 P proline            10.4         58           9
 Q glutamine           2.7         15           2
 R arginine            6.1         34           2
 S serine             14.5         81           5
 T threonine           5.4         30           2
 V valine              4.7         26           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid/lymphoid or mixed-lineage leukemia (trithora... 
MLLT3                 0.467   myeloid/lymphoid or mixed-lineage leukemia (trithor...
DSPP                  0.067   dentin sialophosphoprotein preproprotein 
TNRC18                0.055   trinucleotide repeat containing 18 
NOLC1                 0.053   nucleolar and coiled-body phosphoprotein 1 
NEFH                  0.044   neurofilament, heavy polypeptide 200kDa 
GPATCH8               0.044   G patch domain containing 8 
CDC2L1                0.043   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.043   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SRRM1                 0.043   serine/arginine repetitive matrix 1 
CDC2L1                0.043   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.043   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CYLC1                 0.042   cylicin, basic protein of sperm head cytoskeleton 1...
BRD4                  0.041   bromodomain-containing protein 4 isoform long 
CDC2L2                0.039   cell division cycle 2-like 2 isoform 4 
YEATS2                0.039   YEATS domain containing 2 
MDC1                  0.038   mediator of DNA-damage checkpoint 1 
SFRS4                 0.037   splicing factor, arginine/serine-rich 4 
AFF1                  0.037   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
SRRM2                 0.037   splicing coactivator subunit SRm300 
ZC3H18                0.037   zinc finger CCCH-type containing 18 
CDC2L2                0.036   cell division cycle 2-like 2 isoform 1 
LOC731605             0.036   PREDICTED: similar to BCL2-associated transcription...
CTR9                  0.036   SH2 domain binding protein 1 
HDGF2                 0.036   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.036   hepatoma-derived growth factor-related protein 2 iso...
BCLAF1                0.036   BCL2-associated transcription factor 1 isoform 2 [H...
CDC2L1                0.035   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC100170229          0.034   hypothetical protein LOC100170229 
SCAF1                 0.034   SR-related CTD-associated factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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