Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BAHD1 Sequence: fasta or formatted (780aa) NCBI GI: 139394604
Description:

bromo adjacent homology domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         64           3
 C cysteine            2.7         21           1
 D aspartate           3.2         25           1
 E glutamate           7.1         55           2
 F phenylalanine       1.4         11           1
 G glycine             8.6         67           3
 H histidine           2.8         22           1
 I isoleucine          0.8          6           1
 K lysine              4.5         35           2
 L leucine             9.6         75           3
 M methionine          1.7         13           2
 N asparagine          2.2         17           2
 P proline            14.4        112           2
 Q glutamine           3.5         27           1
 R arginine            8.7         68           7
 S serine              8.8         69           3
 T threonine           4.1         32           2
 V valine              4.4         34           1
 W tryptophan          1.2          9           1
 Y tyrosine            2.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bromo adjacent homology domain containing 1 
BAHCC1                0.027   BAH domain and coiled-coil containing 1 
NACA                  0.027   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.026   myeloid/lymphoid or mixed-lineage leukemia 2 
TNRC18                0.026   trinucleotide repeat containing 18 
RERE                  0.023   atrophin-1 like protein isoform b 
RERE                  0.023   atrophin-1 like protein isoform a 
RERE                  0.023   atrophin-1 like protein isoform a 
PRR12                 0.020   proline rich 12 
LMTK3                 0.019   lemur tyrosine kinase 3 
PRB2                  0.019   proline-rich protein BstNI subfamily 2 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
WIPF3                 0.019   WAS/WASL interacting protein family, member 3 [Homo...
PTPN23                0.018   protein tyrosine phosphatase, non-receptor type 23 [...
COL4A5                0.018   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.018   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.018   type IV collagen alpha 5 isoform 3 precursor 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 2 
GLTSCR1               0.017   glioma tumor suppressor candidate region gene 1 [Ho...
GNAS                  0.016   GNAS complex locus alex 
FLJ22184              0.016   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
BAT2                  0.016   HLA-B associated transcript-2 
PRB1                  0.016   proline-rich protein BstNI subfamily 1 isoform 1 pre...
WIPF2                 0.015   WIRE protein 
ZNF469                0.014   zinc finger protein 469 
KIAA1602              0.014   hypothetical protein LOC57701 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press