Guide to the Human Genome
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Name: ZNF385B Sequence: fasta or formatted (395aa) NCBI GI: 164663778
Description:

zinc finger protein 385B isoform 2

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [369aa] zinc finger protein 385B isoform 3
alt prot [471aa] zinc finger protein 385B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         38           5
 C cysteine            2.0          8           1
 D aspartate           2.8         11           1
 E glutamate           2.8         11           3
 F phenylalanine       3.0         12           1
 G glycine             5.6         22           1
 H histidine           2.8         11           1
 I isoleucine          3.5         14           1
 K lysine             10.1         40           3
 L leucine             8.4         33           2
 M methionine          2.5         10           2
 N asparagine          4.3         17           2
 P proline            10.1         40           2
 Q glutamine           3.5         14           1
 R arginine            3.3         13           2
 S serine             13.9         55           4
 T threonine           5.1         20           3
 V valine              4.8         19           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 385B isoform 2 
ZNF385B               0.979   zinc finger protein 385B isoform 1 
ZNF385B               0.929   zinc finger protein 385B isoform 3 
ZNF385D               0.569   zinc finger protein 385D 
ZNF385A               0.397   zinc finger protein 385A isoform a 
ZNF385A               0.392   zinc finger protein 385A isoform c 
ZNF385C               0.336   PREDICTED: zinc finger protein 385C 
ZNF385C               0.336   PREDICTED: zinc finger protein 385C 
ZNF385C               0.336   PREDICTED: zinc finger protein 385C 
ZNF385A               0.192   zinc finger protein 385A isoform b 
ZMAT4                 0.052   zinc finger, matrin type 4 isoform a 
ZMAT3                 0.048   p53 target zinc finger protein isoform 1 
ZMAT3                 0.047   p53 target zinc finger protein isoform 2 
ZFR                   0.037   zinc finger RNA binding protein 
ZNF346                0.034   zinc finger protein 346 
ZMAT4                 0.030   zinc finger, matrin type 4 isoform b 
ZMAT1                 0.027   zinc finger, matrin type 1 isoform 1 
SNRPC                 0.025   small nuclear ribonucleoprotein polypeptide C 
LOC100129566          0.025   PREDICTED: hypothetical protein LOC100129566 
LOC100129566          0.025   PREDICTED: hypothetical protein LOC100129566 
ABL2                  0.024   arg tyrosine kinase isoform c 
ABL2                  0.024   arg tyrosine kinase isoform b 
ABL2                  0.024   arg tyrosine kinase isoform d 
ABL2                  0.024   arg tyrosine kinase isoform a 
SALL3                 0.024   sal-like 3 
LOC100129566          0.024   PREDICTED: hypothetical protein LOC100129566 
ZFR2                  0.022   zinc finger RNA binding protein 2 isoform 1 
ZFHX4                 0.021   zinc finger homeodomain 4 
SALL1                 0.021   sal-like 1 isoform b 
SALL1                 0.021   sal-like 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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