Guide to the Human Genome
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Name: ZNF385B Sequence: fasta or formatted (369aa) NCBI GI: 164663780
Description:

zinc finger protein 385B isoform 3

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [395aa] zinc finger protein 385B isoform 2
alt prot [471aa] zinc finger protein 385B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         37           5
 C cysteine            1.9          7           1
 D aspartate           3.0         11           1
 E glutamate           3.0         11           3
 F phenylalanine       3.3         12           1
 G glycine             5.4         20           1
 H histidine           2.7         10           1
 I isoleucine          3.8         14           1
 K lysine             10.8         40           3
 L leucine             7.9         29           2
 M methionine          2.4          9           2
 N asparagine          4.6         17           2
 P proline            10.0         37           2
 Q glutamine           3.8         14           1
 R arginine            3.0         11           2
 S serine             14.1         52           4
 T threonine           3.8         14           2
 V valine              4.9         18           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 385B isoform 3 
ZNF385B               1.000   zinc finger protein 385B isoform 2 
ZNF385B               1.000   zinc finger protein 385B isoform 1 
ZNF385D               0.585   zinc finger protein 385D 
ZNF385A               0.422   zinc finger protein 385A isoform a 
ZNF385A               0.422   zinc finger protein 385A isoform c 
ZNF385C               0.357   PREDICTED: zinc finger protein 385C 
ZNF385C               0.357   PREDICTED: zinc finger protein 385C 
ZNF385C               0.357   PREDICTED: zinc finger protein 385C 
ZNF385A               0.201   zinc finger protein 385A isoform b 
ZMAT4                 0.056   zinc finger, matrin type 4 isoform a 
ZMAT3                 0.052   p53 target zinc finger protein isoform 1 
ZMAT3                 0.051   p53 target zinc finger protein isoform 2 
ZFR                   0.039   zinc finger RNA binding protein 
ZNF346                0.037   zinc finger protein 346 
ZMAT4                 0.032   zinc finger, matrin type 4 isoform b 
ZMAT1                 0.030   zinc finger, matrin type 1 isoform 1 
SNRPC                 0.027   small nuclear ribonucleoprotein polypeptide C 
LOC100129566          0.027   PREDICTED: hypothetical protein LOC100129566 
LOC100129566          0.027   PREDICTED: hypothetical protein LOC100129566 
ABL2                  0.025   arg tyrosine kinase isoform c 
ABL2                  0.025   arg tyrosine kinase isoform b 
ABL2                  0.025   arg tyrosine kinase isoform d 
ABL2                  0.025   arg tyrosine kinase isoform a 
SALL3                 0.025   sal-like 3 
LOC100129566          0.025   PREDICTED: hypothetical protein LOC100129566 
ZFR2                  0.024   zinc finger RNA binding protein 2 isoform 1 
ZFHX4                 0.023   zinc finger homeodomain 4 
SALL1                 0.023   sal-like 1 isoform b 
SALL1                 0.023   sal-like 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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