NISCH 34586

Name: NISCH	Sequence: fasta or formatted (1504aa)		NCBI GI: 66472382
Description: nischarin		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 119 3 C cysteine 2.1 31 2 D aspartate 4.5 68 2 E glutamate 9.4 141 8 F phenylalanine 4.3 65 1 G glycine 5.9 88 3 H histidine 3.3 50 1 I isoleucine 4.1 62 2 K lysine 3.9 58 2 L leucine 11.7 176 3 M methionine 1.2 18 1 N asparagine 2.7 40 2 P proline 6.7 101 3 Q glutamine 4.7 71 2 R arginine 4.7 71 2 S serine 7.9 119 3 T threonine 5.2 78 2 V valine 6.7 101 2 W tryptophan 0.8 12 1 Y tyrosine 2.3 35 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nischarin STK11IP 0.028 LKB1 interacting protein CEP97 0.020 centrosomal protein 97kDa SCRIB 0.016 scribble isoform b SCRIB 0.016 scribble isoform a CEP110 0.016 centrosomal protein 110kDa FLII 0.016 flightless I homolog LRRC48 0.015 leucine rich repeat containing 48 isoform b LRRC48 0.015 leucine rich repeat containing 48 isoform b LRRC48 0.015 leucine rich repeat containing 48 isoform a LRRC48 0.015 leucine rich repeat containing 48 isoform a LRRC49 0.015 leucine rich repeat containing 49 LRGUK 0.015 leucine-rich repeats and guanylate kinase domain con... SHOC2 0.014 soc-2 suppressor of clear homolog PPP1R7 0.013 protein phosphatase 1, regulatory subunit 7 DNAL1 0.013 axonemal dynein light chain 1 LRRC40 0.013 leucine rich repeat containing 40 LRRCC1 0.012 sodium channel associated protein 2 isoform a [Homo... LRDD 0.012 leucine rich repeat and death domain containing prot... LRDD 0.012 leucine rich repeat and death domain containing prot... CDKN1C 0.012 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.012 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.012 cyclin-dependent kinase inhibitor 1C isoform a LRDD 0.012 leucine rich repeat and death domain containing prot... RABGGTA 0.012 Rab geranylgeranyltransferase alpha RABGGTA 0.012 Rab geranylgeranyltransferase alpha LRRC23 0.012 leucine rich repeat containing 23 isoform a LRRC23 0.012 leucine rich repeat containing 23 isoform a LRRIQ1 0.012 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.012 leucine-rich repeats and IQ motif containing 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.