Guide to the Human Genome
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Name: ZFHX4 Sequence: fasta or formatted (3571aa) NCBI GI: 126090663
Description:

zinc finger homeodomain 4

Referenced in:

Protein Composition and Structure
Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4        229           3
 C cysteine            2.3         82           2
 D aspartate           5.2        186           3
 E glutamate           6.7        240           3
 F phenylalanine       3.2        115           2
 G glycine             5.0        177           2
 H histidine           2.9        104           2
 I isoleucine          3.1        112           2
 K lysine              7.1        253           3
 L leucine             8.5        302           3
 M methionine          2.2         78           2
 N asparagine          4.5        160           2
 P proline             9.1        325          20
 Q glutamine           7.3        261           7
 R arginine            3.1        109           2
 S serine             10.4        371           4
 T threonine           5.9        209           3
 V valine              4.4        156           2
 W tryptophan          0.4         14           1
 Y tyrosine            2.5         88           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger homeodomain 4 
ZFHX3                 0.499   AT-binding transcription factor 1 
ZFHX2                 0.066   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.066   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.066   PREDICTED: zinc finger homeobox 2 
FMNL2                 0.009   formin-like 2 
WIPF3                 0.009   WAS/WASL interacting protein family, member 3 [Homo...
FMNL1                 0.008   formin-like 1 
PRR12                 0.008   proline rich 12 
CCNK                  0.008   cyclin K isoform 1 
FMN1                  0.008   formin 1 
ENAH                  0.008   enabled homolog isoform a 
ENAH                  0.008   enabled homolog isoform b 
WASL                  0.008   Wiskott-Aldrich syndrome gene-like protein 
RAPH1                 0.008   Ras association and pleckstrin homology domains 1 is...
INF2                  0.007   inverted formin 2 isoform 2 
INF2                  0.007   inverted formin 2 isoform 1 
WASF2                 0.007   WAS protein family, member 2 
DIAPH1                0.007   diaphanous 1 isoform 2 
DIAPH1                0.007   diaphanous 1 isoform 1 
LOC645529             0.007   PREDICTED: similar to Putative acrosin-like proteas...
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
FHDC1                 0.007   FH2 domain containing 1 
SETD1B                0.007   SET domain containing 1B 
MLL4                  0.007   myeloid/lymphoid or mixed-lineage leukemia 4 
ZNF493                0.007   zinc finger protein 493 isoform 1 
ZNF493                0.007   zinc finger protein 493 isoform 3 
C6orf132              0.007   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.007   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.007   PREDICTED: hypothetical protein LOC647024 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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