Guide to the Human Genome
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Name: ZNF474 Sequence: fasta or formatted (364aa) NCBI GI: 46409278
Description:

zinc finger protein 474

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         19           2
 C cysteine            3.8         14           1
 D aspartate           2.2          8           1
 E glutamate           5.5         20           1
 F phenylalanine       2.5          9           1
 G glycine             6.3         23           2
 H histidine           4.4         16           2
 I isoleucine          4.4         16           2
 K lysine              7.7         28           3
 L leucine             9.9         36           2
 M methionine          0.5          2           1
 N asparagine          3.8         14           1
 P proline             9.3         34           2
 Q glutamine           6.9         25           2
 R arginine            6.0         22           2
 S serine             11.3         41           3
 T threonine           4.7         17           1
 V valine              3.0         11           1
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 474 
LOC728460             0.167   PREDICTED: hypothetical protein 
LOC728460             0.167   PREDICTED: hypothetical protein 
LOC728460             0.166   PREDICTED: hypothetical protein 
ZNF398                0.029   zinc finger 398 isoform b 
ZNF398                0.029   zinc finger 398 isoform a 
ZNF629                0.027   zinc finger protein 629 
ZNF775                0.027   zinc finger protein 775 
ZNF567                0.025   zinc finger protein 567 
ZNF10                 0.023   zinc finger protein 10 
ZNF497                0.023   zinc finger protein 497 
ZNF135                0.022   zinc finger protein 135 
ZNF771                0.022   zinc finger protein 771 
ZNF771                0.022   zinc finger protein 771 
ZNF649                0.022   zinc finger protein 649 
ZNF358                0.022   zinc finger protein 358 
ZNF689                0.022   zinc finger protein HIT-39 
ZNF467                0.021   zinc finger protein 467 
ZNF232                0.021   zinc finger protein 232 
ZNF623                0.021   zinc finger protein 623 isoform 1 
ZNF623                0.021   zinc finger protein 623 isoform 2 
ZNF768                0.019   zinc finger protein 768 
ZNF574                0.019   zinc finger protein 574 
ZNF575                0.019   zinc finger protein 575 
FAM164A               0.019   hypothetical protein LOC51101 
ZNF587                0.019   zinc finger protein 587 
ZNF329                0.019   zinc finger protein 329 
ZNF600                0.019   zinc finger protein 600 
ZNF585A               0.019   zinc finger protein 585A 
ZNF585A               0.019   zinc finger protein 585A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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