Guide to the Human Genome
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Name: KIAA1602 Sequence: fasta or formatted (1334aa) NCBI GI: 208022661
Description:

hypothetical protein LOC57701

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         95           2
 C cysteine            1.7         23           1
 D aspartate           3.4         45           2
 E glutamate           6.8         91           3
 F phenylalanine       1.3         17           1
 G glycine            11.4        152           3
 H histidine           1.5         20           1
 I isoleucine          1.1         15           1
 K lysine              4.7         63           2
 L leucine            10.4        139           3
 M methionine          1.4         19           1
 N asparagine          2.3         31           1
 P proline            16.0        213           3
 Q glutamine           4.6         62           2
 R arginine            6.0         80           2
 S serine             10.6        141           7
 T threonine           4.7         63           2
 V valine              3.1         42           2
 W tryptophan          0.8         11           1
 Y tyrosine            0.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57701 
NAP5                  0.035   Nck-associated protein 5 isoform 2 
NAP5                  0.035   Nck-associated protein 5 isoform 1 
COL5A1                0.026   alpha 1 type V collagen preproprotein 
NACA                  0.025   nascent polypeptide-associated complex alpha subuni...
COL1A1                0.023   alpha 1 type I collagen preproprotein 
COL3A1                0.023   collagen type III alpha 1 preproprotein 
FLJ22184              0.022   PREDICTED: hypothetical protein FLJ22184 
COL5A2                0.022   alpha 2 type V collagen preproprotein 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
LMTK3                 0.021   lemur tyrosine kinase 3 
COL16A1               0.020   alpha 1 type XVI collagen precursor 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
PCLO                  0.020   piccolo isoform 2 
PCLO                  0.020   piccolo isoform 1 
COL11A1               0.020   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.020   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.020   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL4A3                0.019   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.019   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.019   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.019   alpha 3 type IV collagen isoform 1 precursor 
COL4A5                0.019   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.019   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.019   type IV collagen alpha 5 isoform 3 precursor 
PRB2                  0.019   proline-rich protein BstNI subfamily 2 
COL2A1                0.019   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.019   collagen, type II, alpha 1 isoform 2 precursor [Hom...
MLL2                  0.019   myeloid/lymphoid or mixed-lineage leukemia 2 
POLR2A                0.018   DNA-directed RNA polymerase II A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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