Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NAP5 Sequence: fasta or formatted (590aa) NCBI GI: 126362969
Description:

Nck-associated protein 5 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {1909aa} Nck-associated protein 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         36           2
 C cysteine            1.5          9           1
 D aspartate           5.6         33           2
 E glutamate          11.0         65           3
 F phenylalanine       1.4          8           1
 G glycine             4.7         28           2
 H histidine           2.4         14           1
 I isoleucine          2.0         12           2
 K lysine              5.3         31           2
 L leucine            11.7         69           3
 M methionine          2.2         13           1
 N asparagine          3.4         20           1
 P proline             4.1         24           1
 Q glutamine           6.9         41           3
 R arginine            7.6         45           1
 S serine             12.2         72           4
 T threonine           4.9         29           2
 V valine              4.6         27           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nck-associated protein 5 isoform 2 
NAP5                  0.604   Nck-associated protein 5 isoform 1 
KIAA1602              0.086   hypothetical protein LOC57701 
CGNL1                 0.037   cingulin-like 1 
MYH3                  0.034   myosin, heavy chain 3, skeletal muscle, embryonic [H...
AZI1                  0.032   5-azacytidine induced 1 isoform a 
CEP250                0.030   centrosomal protein 2 
LOC400352             0.030   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.030   PREDICTED: similar to Putative golgin subfamily A m...
TRIP11                0.029   thyroid hormone receptor interactor 11 
CCDC88B               0.029   coiled-coil domain containing 88 
CEP63                 0.029   centrosomal protein 63 isoform d 
CEP63                 0.029   centrosomal protein 63 isoform c 
AKAP9                 0.028   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.028   A-kinase anchor protein 9 isoform 3 
PLEC1                 0.028   plectin 1 isoform 11 
PLEC1                 0.028   plectin 1 isoform 10 
PLEC1                 0.028   plectin 1 isoform 8 
PLEC1                 0.028   plectin 1 isoform 7 
PLEC1                 0.028   plectin 1 isoform 6 
PLEC1                 0.028   plectin 1 isoform 3 
PLEC1                 0.028   plectin 1 isoform 2 
PLEC1                 0.028   plectin 1 isoform 1 
INCENP                0.028   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.028   inner centromere protein antigens 135/155kDa isofor...
CENPF                 0.028   centromere protein F 
GOLGB1                0.028   golgi autoantigen, golgin subfamily b, macrogolgin ...
ROCK2                 0.027   Rho-associated, coiled-coil containing protein kinas...
AZI1                  0.027   5-azacytidine induced 1 isoform b 
NUMA1                 0.027   nuclear mitotic apparatus protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press