Guide to the Human Genome
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Name: NAP5 Sequence: fasta or formatted (1909aa) NCBI GI: 126362967
Description:

Nck-associated protein 5 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {590aa} Nck-associated protein 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        104           3
 C cysteine            1.7         32           1
 D aspartate           4.7         89           3
 E glutamate           8.0        153           4
 F phenylalanine       1.9         37           2
 G glycine             5.7        109           2
 H histidine           2.4         45           1
 I isoleucine          2.8         54           2
 K lysine              7.3        139           3
 L leucine             8.6        164           3
 M methionine          1.7         33           1
 N asparagine          3.5         66           2
 P proline             8.5        162           5
 Q glutamine           5.3        101           3
 R arginine            5.9        113           2
 S serine             14.4        274           8
 T threonine           6.0        115           2
 V valine              4.7         90           2
 W tryptophan          0.4          8           1
 Y tyrosine            1.1         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nck-associated protein 5 isoform 1 
NAP5                  0.181   Nck-associated protein 5 isoform 2 
KIAA1602              0.026   hypothetical protein LOC57701 
SRRM2                 0.016   splicing coactivator subunit SRm300 
MUC17                 0.015   mucin 17 
PRG4                  0.013   proteoglycan 4 isoform D 
PRG4                  0.013   proteoglycan 4 isoform C 
PRG4                  0.013   proteoglycan 4 isoform B 
PRG4                  0.013   proteoglycan 4 isoform A 
NOLC1                 0.012   nucleolar and coiled-body phosphoprotein 1 
CGNL1                 0.011   cingulin-like 1 
NACA                  0.011   nascent polypeptide-associated complex alpha subuni...
MUC12                 0.011   PREDICTED: mucin 12 
LOC100133756          0.010   PREDICTED: hypothetical protein, partial 
PCLO                  0.010   piccolo isoform 2 
PCLO                  0.010   piccolo isoform 1 
MDC1                  0.010   mediator of DNA-damage checkpoint 1 
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform a ...
BAT2D1                0.010   HBxAg transactivated protein 2 
AZI1                  0.010   5-azacytidine induced 1 isoform a 
WIPF1                 0.009   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.009   WAS/WASL interacting protein family, member 1 
ZNF828                0.009   zinc finger protein 828 
ANK2                  0.009   ankyrin 2 isoform 1 
TCOF1                 0.009   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MUC6                  0.009   mucin 6, gastric 
KIAA1522              0.009   hypothetical protein LOC57648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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