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Search of human proteins with 206597452
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
(296 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 625 e-179
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 611 e-175
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 611 e-175
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 349 2e-96
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 192 4e-49
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 192 4e-49
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 189 2e-48
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 168 5e-42
gi|4757760 adiponectin precursor [Homo sapiens] 167 1e-41
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 159 3e-39
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 149 4e-36
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 146 2e-35
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 146 2e-35
gi|87298828 complement component 1, q subcomponent, B chain prec... 137 1e-32
gi|56786155 complement component 1, q subcomponent, C chain prec... 133 2e-31
gi|166235903 complement component 1, q subcomponent, C chain pre... 133 2e-31
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 128 7e-30
gi|7705753 complement component 1, q subcomponent, A chain precu... 125 4e-29
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 123 2e-28
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 116 3e-26
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens] 116 3e-26
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] 115 6e-26
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens] 115 6e-26
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 114 1e-25
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens] 114 1e-25
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 114 1e-25
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 112 3e-25
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 112 3e-25
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 112 3e-25
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 112 3e-25
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 625 bits (1612), Expect = e-179
Identities = 296/296 (100%), Positives = 296/296 (100%)
Query: 1 MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG 60
MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG
Sbjct: 1 MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG 60
Query: 61 PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG 120
PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG
Sbjct: 61 PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG 120
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN 180
EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN
Sbjct: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN 180
Query: 181 EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG 240
EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG
Sbjct: 181 EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG 240
Query: 241 STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 611 bits (1576), Expect = e-175
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 8 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL
Sbjct: 1 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60
Query: 68 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP
Sbjct: 61 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120
Query: 128 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 187
PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 180
Query: 188 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 247
ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ
Sbjct: 181 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 240
Query: 248 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 289
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 611 bits (1576), Expect = e-175
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 8 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL
Sbjct: 1 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60
Query: 68 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP
Sbjct: 61 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120
Query: 128 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 187
PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 180
Query: 188 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 247
ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ
Sbjct: 181 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 240
Query: 248 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 289
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 349 bits (895), Expect = 2e-96
Identities = 159/250 (63%), Positives = 192/250 (76%)
Query: 36 SPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPL 95
SP+ +CS+PG GPPGPPGA G G GR+G PG+DG+DG G++G+ G G G+TG
Sbjct: 76 SPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135
Query: 96 GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS 155
G G KG G G+ GP GP+G G G G PG KG +G++G+PGLPG C CGS KS
Sbjct: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKS 195
Query: 156 AFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAI 215
AFSV +T SYP ERLPI F+K+L NEG HYN ++GKF+C PGIYYF+YDITLANKHLAI
Sbjct: 196 AFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255
Query: 216 GLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLF 275
GLVHNGQYRI+TFDANTGNHDVASGST++ L+ DEVWL+IF+++QNGLF DP W DSLF
Sbjct: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLF 315
Query: 276 SGFLLYVDTD 285
+GFL+Y D D
Sbjct: 316 TGFLIYADQD 325
Score = 36.2 bits (82), Expect = 0.035
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 91 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
K P + G QG G G GP G G +G G G G G++GD G G
Sbjct: 74 KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127
Score = 32.0 bits (71), Expect = 0.67
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPG 69
P+G PR + G PG G PG G G G GLPG
Sbjct: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 192 bits (487), Expect = 4e-49
Identities = 123/322 (38%), Positives = 166/322 (51%), Gaps = 62/322 (19%)
Query: 14 VTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
+ S C G P G N +PG G G G G G GR G PG+DG
Sbjct: 17 INSQDTCRQGHPGIPGNPGHN-------GLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGT 69
Query: 74 DGRKGE------------KGEKGTAGLRGKTGPLGLAG---------EKGDQGETGKK-- 110
G KGE KG++G+ G GK GP GLAG E G QG+ G K
Sbjct: 70 SGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGD 129
Query: 111 -GPIGPEGEKGEVGPIGP------------PGPKGDRGEQGDPGLPGV------------ 145
GP GPEG +G +GP+GP PGPKG+ G G G PGV
Sbjct: 130 VGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGE 189
Query: 146 -CRCGS--IVLKSAFSVGIT--TSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIY 200
+ G ++ KSAF+VG+T + +P +PI F+K+L+NE HY+ A GKF C G+Y
Sbjct: 190 KGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVY 249
Query: 201 YFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTD 260
YF+Y IT+ ++++ + LV NG + T DA + D ASG V+ L+ DEVWL++ +
Sbjct: 250 YFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGE 309
Query: 261 Q-NGLFSDPGWADSLFSGFLLY 281
+ NGLF+D D+ F+GFLL+
Sbjct: 310 RFNGLFADED-DDTTFTGFLLF 330
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 192 bits (487), Expect = 4e-49
Identities = 114/276 (41%), Positives = 145/276 (52%), Gaps = 40/276 (14%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGL---RGKTGPLGLAGE 100
PGLPGP G PG G PG G +G G G G GE G +G G+ RG GP G+ G
Sbjct: 403 PGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGF 462
Query: 101 KGDQGETGKKGPIGPEG--EKGEVGPIGPPGPKGDRGEQGDPGLPG-----------VCR 147
G +G+ G GP GP G KG GP GPPGP G RG G+PGLPG V
Sbjct: 463 PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMP 522
Query: 148 CGSI----------------------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY 185
G I + SAF+V ++ +YP PI F+K+L+N +HY
Sbjct: 523 EGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHY 582
Query: 186 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT-GNHDVASGSTVI 244
+P TG F C PGIYYFSY + + H+ +GL NG + T+D T G D ASGS +I
Sbjct: 583 DPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 642
Query: 245 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLL 280
L D+VWL++ + NGL+S + S FSGFL+
Sbjct: 643 DLTENDQVWLQLPNAESNGLYSSE-YVHSSFSGFLV 677
Score = 100 bits (249), Expect = 2e-21
Identities = 54/114 (47%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 31 KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRG 90
KGE P PG G G PG++G PG G+ GL G G G G KG+ G G G
Sbjct: 361 KGET-GPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419
Query: 91 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GP+G AG KG G G+ GP G G G GPIGPPG G G +GDPG PG
Sbjct: 420 LPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPG 473
Score = 98.6 bits (244), Expect = 6e-21
Identities = 60/127 (47%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
A GQP KG + PG+ GPPGPPG G PG G G G G G G K
Sbjct: 271 APGQPGIPGTKG-------LPGAPGIAGPPGPPGF-GKPGLPGLKGERGPAGLPGGPGAK 322
Query: 81 GEKGTAGLRGK---TGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
GE+G AGL GK TGP G G +G +G G G GP+GE G GP G PG KG+RG
Sbjct: 323 GEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSP 382
Query: 138 GDPGLPG 144
G G PG
Sbjct: 383 GSDGKPG 389
Score = 95.5 bits (236), Expect = 5e-20
Identities = 59/145 (40%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 15 TSFAICASGQPRGNQLKGENYSPRYI--CSIPGLPGPPGPPG--ANGSPGPHGRIGLPG- 69
T F I + + +G ++GE +P G PGP GPPG GSPG G GLPG
Sbjct: 40 TQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGP 99
Query: 70 -------RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPE--GEKG 120
+ G G G+ GE+G G +G GP GL G +G G G GP G G+ G
Sbjct: 100 PGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPG 159
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGV 145
+ GP G PGP+G GE+G PG+PG+
Sbjct: 160 QQGPTGAPGPRGFPGEKGAPGVPGM 184
Score = 94.4 bits (233), Expect = 1e-19
Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG--------EKGTAGLRGKTG 93
S+PG PG GP GA G G G G PG G +G+KGE G E+G G +G TG
Sbjct: 153 SVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTG 212
Query: 94 PLGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
P G G++G+ G G+ G G G GE+GPIGPPGP+G GE+G G+
Sbjct: 213 PSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGI 263
Score = 90.9 bits (224), Expect = 1e-18
Identities = 58/128 (45%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
G+P LKGE R +PG PG G G G PG G G PG G G KG G
Sbjct: 299 GKPGLPGLKGE----RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGS 354
Query: 83 KGTAGLRGKTGPLGLA---GEKGDQGETGKKGPIGPEGEKGEVGPIGP---PGPKGDRGE 136
G G +G+TGP G A G KG++G G G G G+ G GP G PGPKGD G
Sbjct: 355 HGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGV 414
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 415 GGPPGLPG 422
Score = 86.7 bits (213), Expect = 2e-17
Identities = 53/109 (48%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG---- 99
PGLPGPPGP A G PG G G PG G G KG+ G G G RG GP G+ G
Sbjct: 94 PGLPGPPGP-SAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGI 152
Query: 100 ----EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
+ G QG TG GP G GEKG G G G KG+ G G PG PG
Sbjct: 153 SVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMG-YGAPGRPG 200
Score = 79.3 bits (194), Expect = 4e-15
Identities = 53/130 (40%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 19 ICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
I G+P G Q PR G PG PG G G G +G G PG G G +G
Sbjct: 152 ISVPGKP-GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMG-YGAPGRPGERGLPGPQG 209
Query: 79 EKGEKGTAGL--RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP--GPKGDR 134
G G G+ RG+ G G G KGD+G G+ GPIGP G +G G GP G G
Sbjct: 210 PTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAA 269
Query: 135 GEQGDPGLPG 144
G G PG+PG
Sbjct: 270 GAPGQPGIPG 279
Score = 41.6 bits (96), Expect = 8e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 101 KGDQGETGKKGPIGPEGEKGEVGP-----IGPPGPKGDRGEQGDPGLPGVCRCG 149
+G+QG G GP GP G G GP G PG +G+ G G PG V + G
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPG 109
Score = 35.8 bits (81), Expect = 0.046
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 119 KGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGS 150
+GE G GPPGP G RG G G PG GS
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGS 87
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 189 bits (481), Expect = 2e-48
Identities = 116/294 (39%), Positives = 154/294 (52%), Gaps = 58/294 (19%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGT------------------- 85
GLPG G GA G G G G PG G+DG GEKGE+G
Sbjct: 38 GLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSP 97
Query: 86 --------------AGLRGKTGPLGLAGEKGDQGETGKKGP------------------I 113
GLRG+TGP G G KGD G TG +GP I
Sbjct: 98 GKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPI 157
Query: 114 GPEGEKGEVGPIGP---PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGIT--TSYPEE 168
G G KGE GP GP PG +G RG +GD G G ++ KSAF+VG+T + +P
Sbjct: 158 GKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSS 217
Query: 169 RLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTF 228
+PI F+K+L+NE HY+ A GKF C G+YYF+Y IT+ ++++ + LV NG + T
Sbjct: 218 DVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTR 277
Query: 229 DANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQ-NGLFSDPGWADSLFSGFLLY 281
DA + D ASGS V+ L+ DE+WL++ ++ NGLF+D D+ F+GFLL+
Sbjct: 278 DAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADED-DDTTFTGFLLF 330
Score = 69.7 bits (169), Expect = 3e-12
Identities = 45/100 (45%), Positives = 49/100 (49%), Gaps = 27/100 (27%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G PG PG PG NG LPGRDGRDG KG+KG+ AGE G
Sbjct: 26 GHPGIPGNPGHNG---------LPGRDGRDGAKGDKGD---------------AGEPGCP 61
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GK G GEKGE G G KG +G+QG G PG
Sbjct: 62 GSPGKDGT---SGEKGERGADGKVEAKGIKGDQGSRGSPG 98
Score = 49.3 bits (116), Expect = 4e-06
Identities = 27/63 (42%), Positives = 31/63 (49%)
Query: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
P G + N P +PG GP G PG G GP G G PG G G KG++GEKG
Sbjct: 132 PTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKG 191
Query: 85 TAG 87
G
Sbjct: 192 KIG 194
Score = 36.6 bits (83), Expect = 0.027
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
D G G G G G G G G KGD+G+ G+PG PG
Sbjct: 21 DTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPG 62
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 168 bits (426), Expect = 5e-42
Identities = 106/277 (38%), Positives = 145/277 (52%), Gaps = 19/277 (6%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
+ G GN KGE + S PGL G PG G G G G +G G G G +G K
Sbjct: 195 SKGDTCGNCTKGEKGDQGAMGS-PGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERGGK 253
Query: 81 GEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP------GPKGD- 133
G+KG G++G+ G G +G +G G G G G G KGE G +GPP GPKGD
Sbjct: 254 GQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDI 313
Query: 134 --------RGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY 185
G++G G G + V +SAFS G++ +P +PI F K+L+N+ +Y
Sbjct: 314 GNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQGNY 373
Query: 186 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNH-DVASGSTVI 244
+P TGKF C+ PG Y FSY IT+ + I LV + + K+ + G D AS ++
Sbjct: 374 SPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLLVIL 433
Query: 245 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
L D+VWLE+ D NG++ DS+F+GFLLY
Sbjct: 434 KLSAGDQVWLEV-SKDWNGVYVS-AEDDSIFTGFLLY 468
Score = 83.2 bits (204), Expect = 3e-16
Identities = 46/103 (44%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGR---DGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
G PGP G G G PGP G +G G G G KGE+G++G G GK G G G K
Sbjct: 119 GQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPK 178
Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GD+G G G G +G KG+ G KGD+G G PGL G
Sbjct: 179 GDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHG 221
Score = 81.3 bits (199), Expect = 1e-15
Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 41 CSIPGLPGPPGPPGANGSPGPHGR---IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGL 97
C P +PG G PG G PGP G +G+PG G G +G +G KG GL+G+ G G+
Sbjct: 104 CCSP-VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGV 162
Query: 98 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD------RGEQGDPGLPG 144
G G G G+ GP G +G G G G G KGD +GE+GD G G
Sbjct: 163 PGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMG 215
Score = 80.5 bits (197), Expect = 2e-15
Identities = 49/116 (42%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 44 PGLPGPPGP------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG- 96
PG+ GP GP G G G G G PG+ G G G KG+KG GL G G G
Sbjct: 136 PGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGS 195
Query: 97 --------LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GEKGDQG G G G G KGE G +G G GD+G GD G G
Sbjct: 196 KGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERG 251
Score = 66.6 bits (161), Expect = 2e-11
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 67 LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIG 126
+PG+ G G G+ G KG AG G GP G+ G +G +G G+KG G G++G G G
Sbjct: 108 VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPG 167
Query: 127 PPGPKGDRGEQGDPGLPGV 145
PG +G+ G +GD G G+
Sbjct: 168 KPGAQGEPGPKGDKGNIGL 186
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 167 bits (422), Expect = 1e-41
Identities = 102/243 (41%), Positives = 136/243 (55%), Gaps = 35/243 (14%)
Query: 50 PGPPGA-----NGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
P P GA G PG G G PGRDGRDG GEKGEKG GL G KGD
Sbjct: 30 PLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGEKGEKGDP---------GLIGPKGDI 80
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTS 164
GETG G GP G PG +G +GE G+ G+ V +SAFSVG+ T
Sbjct: 81 GETGVPGAEGPRGF---------PGIQGRKGEPGE---------GAYVYRSAFSVGLETY 122
Query: 165 YPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYR 224
+PI F K+ +N+ HY+ +TGKF C PG+YYF+Y IT+ K + + L +
Sbjct: 123 VTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKVSLFKKDKAM 182
Query: 225 IKTFDA-NTGNHDVASGSTVIYLQPEDEVWLEIFFT-DQNGLFSDPGWADSLFSGFLLYV 282
+ T+D N D ASGS +++L+ D+VWL+++ ++NGL++D DS F+GFLLY
Sbjct: 183 LFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADND-NDSTFTGFLLYH 241
Query: 283 DTD 285
DT+
Sbjct: 242 DTN 244
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 159 bits (402), Expect = 3e-39
Identities = 104/289 (35%), Positives = 137/289 (47%), Gaps = 52/289 (17%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTG--------- 93
+PG GPPGP G G PG GR G PG G G+KG+ G G GLRG +G
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAG 472
Query: 94 ---PLGLAGEKGDQG-----------ETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD 139
P GL G KG+ G E G GP GP G G G GPPGP G G G
Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532
Query: 140 PG-----------LPGVCRCGSIVLKS----------------AFSVGITTSYPEERLPI 172
PG LP G+++ K AF+ +T+ +P +P+
Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV 592
Query: 173 IFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-N 231
F++ L+N YNPATG F C G+YYF+Y + + ++ + L N T+D
Sbjct: 593 KFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYK 652
Query: 232 TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLL 280
G D ASG V+ L+P D+VW+++ NGL+S + S FSGFLL
Sbjct: 653 KGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTE-YIHSSFSGFLL 700
Score = 97.4 bits (241), Expect = 1e-20
Identities = 50/102 (49%), Positives = 57/102 (55%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
+PG+ G GP G G PG G GLPG G G G KGE G G G G G G+KG
Sbjct: 389 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG 448
Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
D G G+ G GP G G GP GP GP+G G +G+PGLPG
Sbjct: 449 DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPG 490
Score = 96.7 bits (239), Expect = 2e-20
Identities = 55/109 (50%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 45 GLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
G PGP GPPG + G GP G G G G+ G +GE G +G GLRG GP GL G G
Sbjct: 109 GQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSG 168
Query: 103 DQ--GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD-----PGLPG 144
G+ G +G GP G +GE GP G PGP GDRG +GD PGLPG
Sbjct: 169 ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPG 217
Score = 94.0 bits (232), Expect = 1e-19
Identities = 56/136 (41%), Positives = 66/136 (48%), Gaps = 34/136 (25%)
Query: 44 PGLPGPPGPPGANGSPGPHG--------RIGLPGRDGRDGRKGEKGEKGTAGLRGKT--- 92
PG+PGP G PGA G GP G GLPG G G KGE G +G GL G T
Sbjct: 257 PGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYG 316
Query: 93 -----------GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP------------IGPPG 129
GP G+ G GD+GE G+ G G +G +G GP GPPG
Sbjct: 317 MPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376
Query: 130 PKGDRGEQGDPGLPGV 145
PKG+ G G PG+PG+
Sbjct: 377 PKGEAGPGGPPGVPGI 392
Score = 94.0 bits (232), Expect = 1e-19
Identities = 55/117 (47%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPG-----RDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
GLPGP GP GA G PG G GL G G G KG++G G GL G G G G
Sbjct: 287 GLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDG 346
Query: 100 EKGDQGETGKKGPIG------------PEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
E G+QG G GP G P G KGE GP GPPG G RG+QG GL G
Sbjct: 347 EPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAG 403
Score = 92.8 bits (229), Expect = 3e-19
Identities = 56/118 (47%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 44 PGLPGPPGPPGANGSPGPHG-----------------RIGLPGRDGRDGRKGEKGEKGTA 86
PG G PGPPG G PGP G + GLPG G+ G G G G A
Sbjct: 175 PGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPA 234
Query: 87 GLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GL GK G GL G GD+GE+G G GP GE G VGP GPPG G G G GLPG
Sbjct: 235 GL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPGAAGLPG 290
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/109 (46%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGL------PGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
+PGL G G PG +G PG G GL PG G GR+G G KG AG G G G
Sbjct: 332 VPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPG 391
Query: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
+ G++G G GK G G G G GP GP GPKG+ G G PG PGV
Sbjct: 392 IRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGV 440
Score = 91.7 bits (226), Expect = 7e-19
Identities = 55/122 (45%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
G+P + GE P+ + PGLPG G PG G PGP G G PG G G G +G+
Sbjct: 340 GEPGEDGEPGEQ-GPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGIRGD 395
Query: 83 KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
+G +GL GK G+ GE+G G G GP GP+GE G G G PG G G++GD GL
Sbjct: 396 QGPSGLAGKP---GVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL 452
Query: 143 PG 144
PG
Sbjct: 453 PG 454
Score = 90.5 bits (223), Expect = 2e-18
Identities = 53/120 (44%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK------GEKGTAGLRGKTGPLG 96
+PGLPGP G G G PG G G PG DG G +G + G G+AGL G+ GP G
Sbjct: 317 MPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376
Query: 97 LAGE------------KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GE +GDQG +G G G GE+G G GPPGP G +GE G G PG
Sbjct: 377 PKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPG 436
Score = 89.7 bits (221), Expect = 3e-18
Identities = 54/118 (45%), Positives = 61/118 (51%), Gaps = 17/118 (14%)
Query: 44 PGLPGP-----PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLR--------- 89
PGLPGP PG PGA G PGP G G PG G G G++G KG G+
Sbjct: 161 PGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPG 220
Query: 90 --GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G GP GL G G G+ G G G G+KGE GP G PGP+G+ G G G PGV
Sbjct: 221 QGGAPGPPGLPGPAG-LGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGV 277
Score = 85.9 bits (211), Expect = 4e-17
Identities = 52/107 (48%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 44 PGLPGP-----PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
PGL GP PG PG G GP G GL G G G GE GE+G GL GP GL
Sbjct: 307 PGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGL---GGPPGL- 362
Query: 99 GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G G G++GP GP+GE G GP G PG +GD+G G G PGV
Sbjct: 363 --PGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGV 407
Score = 85.5 bits (210), Expect = 5e-17
Identities = 50/109 (45%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG--EKGTAGLRGKTGPLGLAGE 100
+PG GPPG PG G PG G GL G G G G G G G +G GP G GE
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGE 189
Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
G QGE G G G +G+ G VG G PG G G G PGLPG G
Sbjct: 190 PGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGLG 237
Score = 47.0 bits (110), Expect = 2e-05
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 59 PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGE 118
P G +G P R+G KG+ E L P+ L GE G G+ G +GP GP G
Sbjct: 46 PMQKGPVGPPFREG----KGQYLEMPLPLL-----PMDLKGEPGPPGKPGPRGPPGPPGF 96
Query: 119 KGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
G+ G +G PG G G G PG + + G
Sbjct: 97 PGKPG-MGKPGLHGQPGPAGPPGFSRMGKAG 126
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 149 bits (375), Expect = 4e-36
Identities = 96/244 (39%), Positives = 122/244 (50%), Gaps = 41/244 (16%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PG PG P G+PG HG GLPGRDGRDGR G G GEKG+
Sbjct: 29 PGHPGLP------GTPGHHGSQGLPGRDGRDGRDGAP---------------GAPGEKGE 67
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITT 163
G G GP G G +GE GP GP GP G+ C S+ +SAFS +
Sbjct: 68 GGRPGLPGPRGDPGPRGEAGPAGPTGPAGE------------C---SVPPRSAFSAKRSE 112
Query: 164 SY--PEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNG 221
S P P+ F++VL NE HY+ TGKF C PG+YYF+ T+ L LV NG
Sbjct: 113 SRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNG 172
Query: 222 QYRIKTFDANTGNHDVA--SGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFL 279
+ F G A SG ++ L+PED+VW+++ D G+++ DS FSGFL
Sbjct: 173 ESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIK-TDSTFSGFL 231
Query: 280 LYVD 283
+Y D
Sbjct: 232 VYSD 235
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 146 bits (368), Expect = 2e-35
Identities = 96/269 (35%), Positives = 130/269 (48%), Gaps = 31/269 (11%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-----LGL 97
+PGL GP G PG G G G G+PG G G G G G G G GP +G
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK 534
Query: 98 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRG-------EQGDP------GLPG 144
G G G GK G +GP+G+ G GP GPPGP G QG+ G+ G
Sbjct: 535 PGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Query: 145 VC-----------RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFI 193
V G AF+ +T +P P+ FNK+L+N ++YNP TG F
Sbjct: 595 VKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFT 654
Query: 194 CAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-NTGNHDVASGSTVIYLQPEDEV 252
C PG+YYF+Y + ++ + L N + + T+D G D ASGS V+ L+P D V
Sbjct: 655 CEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRV 714
Query: 253 WLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
+L++ GL++ + S FSG+LLY
Sbjct: 715 FLQMPSEQAAGLYAGQ-YVHSSFSGYLLY 742
Score = 100 bits (249), Expect = 2e-21
Identities = 54/115 (46%), Positives = 64/115 (55%), Gaps = 18/115 (15%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
+PG+PGP GPPGA G PGP G G+ G G G KGE G L+G G G GE G
Sbjct: 394 LPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG------LQGFPGKPGFLGEVG 447
Query: 103 DQGETGKKGPIGPEGEKGE------------VGPIGPPGPKGDRGEQGDPGLPGV 145
G G GPIGP+GE G+ +GP G PG GD+G QG PG+PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Score = 98.2 bits (243), Expect = 8e-21
Identities = 52/106 (49%), Positives = 58/106 (54%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGL G PG PG G GP G GLPG G G G+KG G G+ G GP G G GD
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGD 490
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
QG G G G G G +GP G PGPKG+ G G PG PG+ + G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536
Score = 96.7 bits (239), Expect = 2e-20
Identities = 65/158 (41%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEK 80
GQP KGE +PGLPGPPG PG G PGP G G+ G G G +GEK
Sbjct: 325 GQPGFPGGKGEQ-------GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377
Query: 81 G------------EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGE------- 121
G E G G+ G GP G G G +GE G GP GP G KGE
Sbjct: 378 GPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFP 437
Query: 122 -----VGPIGPPG---------PKGDRGEQGDPGLPGV 145
+G +GPPG PKG+ G++G PGLPGV
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV 475
Score = 94.7 bits (234), Expect = 8e-20
Identities = 58/127 (45%), Positives = 65/127 (51%), Gaps = 28/127 (22%)
Query: 43 IPGLPGPPGP---PGANGSPGPHGRIGL--------------PGRDGRDGRKGEKGEKGT 85
+ G PGP GP PGA G PGP G IG+ PG+DG G+ G G KG
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335
Query: 86 AGLRGKTGPLGL--------AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
GL G GP GL G KGD+G G G +GP GEK GPIG PG G GE
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK---GPIGAPGIGGPPGEP 392
Query: 138 GDPGLPG 144
G PG+PG
Sbjct: 393 GLPGIPG 399
Score = 92.8 bits (229), Expect = 3e-19
Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 43 IPGLPGPPGP--------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP 94
IPG+ G PGP PG G PG G +G+PG G G+KGE G G G +G GP
Sbjct: 142 IPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201
Query: 95 LGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GL G+ G G G+ GP G G KG GP G GPKGD+G G PG PGV
Sbjct: 202 HGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGV 253
Score = 92.8 bits (229), Expect = 3e-19
Identities = 58/129 (44%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
Query: 43 IPGLPGPPGP-----------PGANGSPGP---HGRIGLPGRDGRDGRKGEKG------- 81
IPG GPPGP PG G PGP G GLPG G G KG+KG
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251
Query: 82 -EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
KG G+ G GP+GL G G G TG GP GP G+ G G GP GP G G QG P
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 141 GLPGVCRCG 149
G+PG+ + G
Sbjct: 311 GIPGIGKPG 319
Score = 89.4 bits (220), Expect = 4e-18
Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GP G PG G PG G G+PG G G G G KG G+ G GP G GE G Q
Sbjct: 375 GEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434
Query: 105 GETGKKG---PIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G GK G +GP G +G GPIGP G G +G G PG+PG+
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGL 478
Score = 81.6 bits (200), Expect = 7e-16
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 43 IPGLPGPPGPPGANGSPGPHGR--IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
+PG PG GPPG +G PGP G +G PG G G +G G+ G G G GP+G+ G
Sbjct: 247 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV 306
Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQG---DPGLPGVCRCG 149
+G G G IG G+ G G G PG KG++G G PGLPG+ + G
Sbjct: 307 QGPPGIPG----IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG 354
Score = 73.2 bits (178), Expect = 3e-13
Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 40 ICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
+ S+ G GP G PG G PGP G LPG G G KG+ G +G G+ GK G G+ G
Sbjct: 113 LASLRGEQGPRGEPGPRGPPGPPG---LPGH-GIPGIKGKPGPQGYPGV-GKPGMPGMPG 167
Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
+ G G G KG IG + G IGP G G +G G GLPG+ + G
Sbjct: 168 KPGAMGMPGAKGEIGQK------GEIGPMGIPGPQGPPGPHGLPGIGKPG 211
Score = 45.4 bits (106), Expect = 6e-05
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 37/110 (33%)
Query: 70 RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK--------KGPIGPE----- 116
R G++ + E A LRG+ GP G G +G G G KG GP+
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 117 ------------------------GEKGEVGPIGPPGPKGDRGEQGDPGL 142
G+KGE+GP+G PGP+G G G PG+
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 89 RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL--PGV 145
+GK PL A +G+QG G+ GP GP G G G G PG KG G QG PG+ PG+
Sbjct: 107 KGKEIPL--ASLRGEQGPRGEPGPRGPPGPPGLPGH-GIPGIKGKPGPQGYPGVGKPGM 162
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 146 bits (368), Expect = 2e-35
Identities = 96/269 (35%), Positives = 130/269 (48%), Gaps = 31/269 (11%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-----LGL 97
+PGL GP G PG G G G G+PG G G G G G G G GP +G
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK 534
Query: 98 AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRG-------EQGDP------GLPG 144
G G G GK G +GP+G+ G GP GPPGP G QG+ G+ G
Sbjct: 535 PGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Query: 145 VC-----------RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFI 193
V G AF+ +T +P P+ FNK+L+N ++YNP TG F
Sbjct: 595 VKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFT 654
Query: 194 CAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-NTGNHDVASGSTVIYLQPEDEV 252
C PG+YYF+Y + ++ + L N + + T+D G D ASGS V+ L+P D V
Sbjct: 655 CEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRV 714
Query: 253 WLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
+L++ GL++ + S FSG+LLY
Sbjct: 715 FLQMPSEQAAGLYAGQ-YVHSSFSGYLLY 742
Score = 100 bits (249), Expect = 2e-21
Identities = 54/115 (46%), Positives = 64/115 (55%), Gaps = 18/115 (15%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
+PG+PGP GPPGA G PGP G G+ G G G KGE G L+G G G GE G
Sbjct: 394 LPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG------LQGFPGKPGFLGEVG 447
Query: 103 DQGETGKKGPIGPEGEKGE------------VGPIGPPGPKGDRGEQGDPGLPGV 145
G G GPIGP+GE G+ +GP G PG GD+G QG PG+PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502
Score = 98.2 bits (243), Expect = 8e-21
Identities = 52/106 (49%), Positives = 58/106 (54%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGL G PG PG G GP G GLPG G G G+KG G G+ G GP G G GD
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGD 490
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
QG G G G G G +GP G PGPKG+ G G PG PG+ + G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536
Score = 96.7 bits (239), Expect = 2e-20
Identities = 65/158 (41%), Positives = 75/158 (47%), Gaps = 42/158 (26%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEK 80
GQP KGE +PGLPGPPG PG G PGP G G+ G G G +GEK
Sbjct: 325 GQPGFPGGKGEQ-------GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377
Query: 81 G------------EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGE------- 121
G E G G+ G GP G G G +GE G GP GP G KGE
Sbjct: 378 GPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFP 437
Query: 122 -----VGPIGPPG---------PKGDRGEQGDPGLPGV 145
+G +GPPG PKG+ G++G PGLPGV
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV 475
Score = 94.7 bits (234), Expect = 8e-20
Identities = 58/127 (45%), Positives = 65/127 (51%), Gaps = 28/127 (22%)
Query: 43 IPGLPGPPGP---PGANGSPGPHGRIGL--------------PGRDGRDGRKGEKGEKGT 85
+ G PGP GP PGA G PGP G IG+ PG+DG G+ G G KG
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335
Query: 86 AGLRGKTGPLGL--------AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
GL G GP GL G KGD+G G G +GP GEK GPIG PG G GE
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK---GPIGAPGIGGPPGEP 392
Query: 138 GDPGLPG 144
G PG+PG
Sbjct: 393 GLPGIPG 399
Score = 92.8 bits (229), Expect = 3e-19
Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 43 IPGLPGPPGP--------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP 94
IPG+ G PGP PG G PG G +G+PG G G+KGE G G G +G GP
Sbjct: 142 IPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201
Query: 95 LGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GL G+ G G G+ GP G G KG GP G GPKGD+G G PG PGV
Sbjct: 202 HGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGV 253
Score = 92.8 bits (229), Expect = 3e-19
Identities = 58/129 (44%), Positives = 65/129 (50%), Gaps = 23/129 (17%)
Query: 43 IPGLPGPPGP-----------PGANGSPGP---HGRIGLPGRDGRDGRKGEKG------- 81
IPG GPPGP PG G PGP G GLPG G G KG+KG
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251
Query: 82 -EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
KG G+ G GP+GL G G G TG GP GP G+ G G GP GP G G QG P
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310
Query: 141 GLPGVCRCG 149
G+PG+ + G
Sbjct: 311 GIPGIGKPG 319
Score = 89.4 bits (220), Expect = 4e-18
Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GP G PG G PG G G+PG G G G G KG G+ G GP G GE G Q
Sbjct: 375 GEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434
Query: 105 GETGKKG---PIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G GK G +GP G +G GPIGP G G +G G PG+PG+
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGL 478
Score = 81.6 bits (200), Expect = 7e-16
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 43 IPGLPGPPGPPGANGSPGPHGR--IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
+PG PG GPPG +G PGP G +G PG G G +G G+ G G G GP+G+ G
Sbjct: 247 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV 306
Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQG---DPGLPGVCRCG 149
+G G G IG G+ G G G PG KG++G G PGLPG+ + G
Sbjct: 307 QGPPGIPG----IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG 354
Score = 73.2 bits (178), Expect = 3e-13
Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 40 ICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
+ S+ G GP G PG G PGP G LPG G G KG+ G +G G+ GK G G+ G
Sbjct: 113 LASLRGEQGPRGEPGPRGPPGPPG---LPGH-GIPGIKGKPGPQGYPGV-GKPGMPGMPG 167
Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
+ G G G KG IG + G IGP G G +G G GLPG+ + G
Sbjct: 168 KPGAMGMPGAKGEIGQK------GEIGPMGIPGPQGPPGPHGLPGIGKPG 211
Score = 45.4 bits (106), Expect = 6e-05
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 37/110 (33%)
Query: 70 RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK--------KGPIGPE----- 116
R G++ + E A LRG+ GP G G +G G G KG GP+
Sbjct: 98 RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157
Query: 117 ------------------------GEKGEVGPIGPPGPKGDRGEQGDPGL 142
G+KGE+GP+G PGP+G G G PG+
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207
Score = 43.1 bits (100), Expect = 3e-04
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 89 RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL--PGV 145
+GK PL A +G+QG G+ GP GP G G G G PG KG G QG PG+ PG+
Sbjct: 107 KGKEIPL--ASLRGEQGPRGEPGPRGPPGPPGLPGH-GIPGIKGKPGPQGYPGVGKPGM 162
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 137 bits (345), Expect = 1e-32
Identities = 92/242 (38%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 48 GPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGET 107
GPP PG G PG PG DG+ G G KGEKG GL G G G G+ G G
Sbjct: 33 GPPAIPGIPGIPGT------PGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNP 86
Query: 108 GKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPE 167
GK GP GP G KG G G PGPKG+ G+ K AFS T + P
Sbjct: 87 GKVGPKGPMGPKGGPGAPGAPGPKGESGDY------------KATQKIAFSATRTINVPL 134
Query: 168 ER-LPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQ--YR 224
R I F+ V+ N +Y P +GKF C PG+YYF+Y + + +L + L+ + +
Sbjct: 135 RRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHAS-SRGNLCVNLMRGRERAQK 193
Query: 225 IKTF-DANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
+ TF D V +G V+ L+ + V+L+ TD+N L G A+S+FSGFLL+ D
Sbjct: 194 VVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQA--TDKNSLLGMEG-ANSIFSGFLLFPD 250
Query: 284 TD 285
+
Sbjct: 251 ME 252
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 133 bits (335), Expect = 2e-31
Identities = 89/232 (38%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 54 GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPI 113
G G PG G G PG+DG DG G KGE G + G GP G GE G G GK GP+
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 114 GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPII 173
GP G G GP+G PG G+ G +S F+V T P +I
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQK------------FQSVFTVTRQTHQPPAPNSLI 138
Query: 174 -FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT 232
FN VL N Y+ +TGKF C PG+YYF Y + +L + L +G ++ TF +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196
Query: 233 G-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
+ V SG ++ LQ +EVWL + D + G +DS+FSGFLL+ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAV--NDYYDMVGIQG-SDSVFSGFLLFPD 245
Score = 42.7 bits (99), Expect = 4e-04
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 31 KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
KG+ P +PG PG GP G G PG G +G+PG G +GR +K
Sbjct: 72 KGQKGEP----GLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 133 bits (335), Expect = 2e-31
Identities = 89/232 (38%), Positives = 116/232 (50%), Gaps = 19/232 (8%)
Query: 54 GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPI 113
G G PG G G PG+DG DG G KGE G + G GP G GE G G GK GP+
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90
Query: 114 GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPII 173
GP G G GP+G PG G+ G +S F+V T P +I
Sbjct: 91 GPPGMPGVPGPMGIPGEPGEEGRYKQK------------FQSVFTVTRQTHQPPAPNSLI 138
Query: 174 -FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT 232
FN VL N Y+ +TGKF C PG+YYF Y + +L + L +G ++ TF +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196
Query: 233 G-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
+ V SG ++ LQ +EVWL + D + G +DS+FSGFLL+ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAV--NDYYDMVGIQG-SDSVFSGFLLFPD 245
Score = 42.7 bits (99), Expect = 4e-04
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 31 KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
KG+ P +PG PG GP G G PG G +G+PG G +GR +K
Sbjct: 72 KGQKGEP----GLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 128 bits (321), Expect = 7e-30
Identities = 80/205 (39%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 94 PLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ---GDPGLPGVCRCGS 150
P + G KG+ G GK GP GP GE G GP+GPPG KG+ G Q G PG PG+ G+
Sbjct: 56 PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115
Query: 151 I-------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFS 203
I V K AF G+ + E + F+ V+ N G HY+P TGKF C+ PGIY+F+
Sbjct: 116 ISAATYSTVPKIAFYAGLKRQH-EGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174
Query: 204 YDITLA---NKHLAIGLVHNGQYRIKTF--DANTGNHDVASGSTVIYLQPEDEVWLEIFF 258
Y + + + L N Q R DA+ N+D AS S V++L+P DEV++++
Sbjct: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQ-NYDYASNSVVLHLEPGDEVYIKL-- 231
Query: 259 TDQNGLFSDPGWADSLFSGFLLYVD 283
D S FSGF++Y D
Sbjct: 232 -DGGKAHGGNNNKYSTFSGFIIYAD 255
Score = 47.4 bits (111), Expect = 2e-05
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGL 88
G PG GP G G PGP G +G PG G GR+G G G GL
Sbjct: 67 GRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110
Score = 42.0 bits (97), Expect = 6e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDG 72
P+G + PR PG PGP GPPG G PG G G PG G
Sbjct: 62 PKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 92
G GPPG PG G GP G G PGR G G G G + T
Sbjct: 73 GPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 125 bits (314), Expect = 4e-29
Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 20/227 (8%)
Query: 60 GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEK 119
G G G PGR GR G KGE+GE G G+R G+ G KGDQGE GP G G+
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAPGIR-----TGIQGLKGDQGE---PGPSGNPGKV 82
Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLF 179
G GP GP G +G G +G G PG + + AFS I + P +IF+ V+
Sbjct: 83 GYPGPSGPLGARGIPGIKGTKGSPGNIKDQP---RPAFS-AIRRNPPMGGNVVIFDTVIT 138
Query: 180 NEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTF-----DANTGN 234
N+ E Y +G+F+C PG YYF++ + L+ + + +V + + +++ N G
Sbjct: 139 NQEEPYQNHSGRFVCTVPGYYYFTFQV-LSQWEICLSIVSSSRGQVRRSLGFCDTTNKGL 197
Query: 235 HDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
V SG V+ LQ D+VW+E + G ADS+FSGFL++
Sbjct: 198 FQVVSGGMVLQLQQGDQVWVE--KDPKKGHIYQGSEADSVFSGFLIF 242
Score = 45.8 bits (107), Expect = 4e-05
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
G+P +GE +P I GL G G PG +G+P G++G PG G G +G G
Sbjct: 43 GRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNP---GKVGYPGPSGPLGARGIPGI 99
Query: 83 KGTAGLRG 90
KGT G G
Sbjct: 100 KGTKGSPG 107
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 123 bits (309), Expect = 2e-28
Identities = 94/289 (32%), Positives = 136/289 (47%), Gaps = 44/289 (15%)
Query: 8 MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
M ++L V + +SG P G+ Y C + P P PGA
Sbjct: 1 MLLVLVVLIPVLVSSGGPEGH------YEMLGTCRMVCDPYPARGPGAGART-------- 46
Query: 68 PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
DG D + G + L + G +G G TGK GP GP G+ G GP+GP
Sbjct: 47 ---DGGDALSEQSGAPPPSTL--------VQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP 95
Query: 128 PGPKGDRGEQGDPGLPGVCRCGSI-------VLKSAFSVGITTSYPEERLPII-FNKVLF 179
PG KG+ G+ G PGLPG G+I V + AF G+ P E ++ F+ V+
Sbjct: 96 PGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKN--PHEGYEVLKFDDVVT 153
Query: 180 NEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTF--DANTGN 234
N G +Y+ A+GKF C PG Y+F+Y + + + L NGQ R DA+ N
Sbjct: 154 NLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQ-N 212
Query: 235 HDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
+D AS S +++L DEV++++ +G S+ S FSGF++Y D
Sbjct: 213 YDYASNSVILHLDAGDEVFIKLDGGKAHGGNSN---KYSTFSGFIIYSD 258
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 116 bits (290), Expect = 3e-26
Identities = 64/149 (42%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
+G P GE +P +PGLPGP PGPPG G PGP G GL G G G +G
Sbjct: 528 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 585
Query: 79 EKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEKG 120
EKG++G GL G GP+G+ G G +GE G K GP G +G +G
Sbjct: 586 EKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRG 645
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
E G G GPKGD+G+QG PGL C G
Sbjct: 646 ERGKKGSRGPKGDKGDQGAPGLDAPCPLG 674
Score = 112 bits (281), Expect = 3e-25
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 447 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 506
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG +PG+
Sbjct: 507 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 550
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
+ G G PG PG G G G+ G PG G G KG +G G GL+G
Sbjct: 506 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 565
Query: 92 TGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GP G A GEKG QGE G +GP+G G G +G GP GPKG+RG +GDPG+ G
Sbjct: 566 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 624
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 248 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 307
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 308 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 367
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 368 PGPPGLPG 375
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 360 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 419
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 420 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 475
Score = 86.3 bits (212), Expect = 3e-17
Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 34/136 (25%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLA 230
Query: 88 ------------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPG 129
++G GP G G G G G GP+GP G G GP G PG
Sbjct: 231 PPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPG 290
Query: 130 PKGDRGEQGDPGLPGV 145
+G G +G+ G+PG+
Sbjct: 291 IQGYHGRKGERGMPGM 306
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 358 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 413
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 414 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 473
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 474 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 520
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 319 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 378
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 379 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 438
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 439 RTLALMGPPGLPGQIGPPGAPGI 461
Score = 82.0 bits (201), Expect = 6e-16
Identities = 57/158 (36%), Positives = 64/158 (40%), Gaps = 57/158 (36%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGE------KGDQGETGKKGPIGPEGEKGE------------------------- 121
GP+GL G+ KGD G TG G GP+G+KGE
Sbjct: 175 GPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPV 234
Query: 122 ---------------VGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 235 IKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 272
Score = 73.2 bits (178), Expect = 3e-13
Identities = 46/104 (44%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGEKGEVGP---IGPPGPKGDRGEQGDPGLPGVC 146
G GPIG +G+ G GP +G GP G G QG G G C
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQC 213
>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
Length = 705
Score = 116 bits (290), Expect = 3e-26
Identities = 64/149 (42%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
+G P GE +P +PGLPGP PGPPG G PGP G GL G G G +G
Sbjct: 547 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 604
Query: 79 EKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEKG 120
EKG++G GL G GP+G+ G G +GE G K GP G +G +G
Sbjct: 605 EKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRG 664
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
E G G GPKGD+G+QG PGL C G
Sbjct: 665 ERGKKGSRGPKGDKGDQGAPGLDAPCPLG 693
Score = 112 bits (281), Expect = 3e-25
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG +PG+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 569
Score = 95.9 bits (237), Expect = 4e-20
Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
+ G G PG PG G G G+ G PG G G KG +G G GL+G
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 584
Query: 92 TGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GP G A GEKG QGE G +GP+G G G +G GP GPKG+RG +GDPG+ G
Sbjct: 585 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 643
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 387 PGPPGLPG 394
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480
Score = 79.0 bits (193), Expect = 5e-15
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
++G GP G G G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290
Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325
Score = 78.2 bits (191), Expect = 8e-15
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
GP+GL GK G GP+G+ G GP G PGP+G +GE+G G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GPIG +G+ KG++G GPPG G +G++G+ G G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G GPPG PG G PG G IGL DG+ G G KG GL G G G G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
G++G+ G K P+ G + +
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291
>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
Length = 668
Score = 115 bits (287), Expect = 6e-26
Identities = 65/150 (43%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 22 SGQPRGNQLKGENYSPRYICS-IPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRK 77
+G P KGE S +PGLPGP PGPPG G PGP G GL G G G +
Sbjct: 507 NGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 566
Query: 78 GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEK 119
GEKG++G GL G GP+G+ G G +GE G K GP G +G +
Sbjct: 567 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 626
Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
GE G G GPKGD+G+QG PGL C G
Sbjct: 627 GERGKKGSRGPKGDKGDQGAPGLDAPCPLG 656
Score = 104 bits (260), Expect = 8e-23
Identities = 55/104 (52%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 444 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 503
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGP--KGDRGEQGDPGLPGV 145
+GE G G G +GEKGE G G P P G G G PGL GV
Sbjct: 504 KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGV 547
Score = 96.7 bits (239), Expect = 2e-20
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIG--LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
+ G G PG PG G G G+ G +PG G +G G G +G G +G+ G G GE
Sbjct: 503 VKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGE 562
Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
KG QGE G +GP+G G G +G GP GPKG+RG +GDPG+ G
Sbjct: 563 KGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 606
Score = 94.4 bits (233), Expect = 1e-19
Identities = 67/153 (43%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 20 CASGQP---RGNQ---LKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
C S P R +Q LKGE S I PG PGPPGP G G PG G +G PG G
Sbjct: 221 CLSSMPAALRSSQIIALKGEQ-SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP 279
Query: 74 DGRKGE---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEK 119
G KG+ KGE+G G+ GK G G +AG KG+ G G KG G EG
Sbjct: 280 PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSP 339
Query: 120 GEVGPIGPPGPKGD--------RGEQGDPGLPG 144
G G +G G KGD RGE G PGLPG
Sbjct: 340 GLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPG 372
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 357 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 416
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 417 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 472
Score = 87.4 bits (215), Expect = 1e-17
Identities = 49/133 (36%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 ---------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
++G GP G G G G G GP+GP G G GP G PG +G
Sbjct: 231 SSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 290
Query: 133 DRGEQGDPGLPGV 145
G +G+ G+PG+
Sbjct: 291 YHGRKGERGMPGM 303
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 355 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 410
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 411 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 470
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 471 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 517
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 316 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 375
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 376 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 435
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 436 RTLALMGPPGLPGQIGPPGAPGI 458
Score = 83.2 bits (204), Expect = 3e-16
Identities = 57/155 (36%), Positives = 64/155 (41%), Gaps = 54/155 (34%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGE------KGDQGETGKKGPIGPEGEKGE------------------------- 121
GP+GL G+ KGD G TG G GP+G+KGE
Sbjct: 175 GPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQI 234
Query: 122 ------------VGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 235 IALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 269
Score = 74.7 bits (182), Expect = 9e-14
Identities = 46/99 (46%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GPIG +G+ G PGPKGD G G PG PG
Sbjct: 170 FPGFPGPIGLDGKPGH------PGPKGDMGLTGPPGQPG 202
>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
Length = 690
Score = 115 bits (287), Expect = 6e-26
Identities = 65/150 (43%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 22 SGQPRGNQLKGENYSPRYICS-IPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRK 77
+G P KGE S +PGLPGP PGPPG G PGP G GL G G G +
Sbjct: 529 NGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 588
Query: 78 GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEK 119
GEKG++G GL G GP+G+ G G +GE G K GP G +G +
Sbjct: 589 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 648
Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
GE G G GPKGD+G+QG PGL C G
Sbjct: 649 GERGKKGSRGPKGDKGDQGAPGLDAPCPLG 678
Score = 104 bits (260), Expect = 8e-23
Identities = 55/104 (52%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGP--KGDRGEQGDPGLPGV 145
+GE G G G +GEKGE G G P P G G G PGL GV
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGV 569
Score = 96.7 bits (239), Expect = 2e-20
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIG--LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
+ G G PG PG G G G+ G +PG G +G G G +G G +G+ G G GE
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGE 584
Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
KG QGE G +GP+G G G +G GP GPKG+RG +GDPG+ G
Sbjct: 585 KGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 628
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 387 PGPPGLPG 394
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480
Score = 79.0 bits (193), Expect = 5e-15
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
++G GP G G G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290
Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325
Score = 78.2 bits (191), Expect = 8e-15
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
GP+GL GK G GP+G+ G GP G PGP+G +GE+G G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GPIG +G+ KG++G GPPG G +G++G+ G G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G GPPG PG G PG G IGL DG+ G G KG GL G G G G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
G++G+ G K P+ G + +
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 114 bits (284), Expect = 1e-25
Identities = 98/280 (35%), Positives = 120/280 (42%), Gaps = 56/280 (20%)
Query: 38 RYICSIPGLPGPPG-PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
R IC P P G PPGA P L + L P
Sbjct: 30 RMICD-PYTAAPGGEPPGAKAQPPGPSTAAL---------------EVMQDLSANPPPPF 73
Query: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP---------GVCR 147
+ G KGD G GK GP GP GE G GP GPPG KGD G G PGL GV
Sbjct: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
Query: 148 CGSIV------------------LKSAFSVGITTSYPEERLPII-FNKVLFNEGEHYNPA 188
G+ V K AF VG+ + P E ++ F+ V+ N G HY+P
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS--PHEGYEVLKFDDVVTNLGNHYDPT 191
Query: 189 TGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTF--DANTGNHDVASGSTV 243
TGKF C GIY+F+Y I + + L NGQ R DA+ N+D AS S V
Sbjct: 192 TGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ-NYDYASNSVV 250
Query: 244 IYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
++L DEV++++ D S FSGFLLY D
Sbjct: 251 LHLDSGDEVYVKL---DGGKAHGGNNNKYSTFSGFLLYPD 287
>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
Length = 691
Score = 114 bits (284), Expect = 1e-25
Identities = 55/102 (53%), Positives = 63/102 (61%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG G+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGL 567
Score = 106 bits (264), Expect = 3e-23
Identities = 57/121 (47%), Positives = 65/121 (53%), Gaps = 21/121 (17%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRK---------------GEKGEKGTAGLR 89
G PGP GPPG +G PG G G PG G G K GEKG G GL+
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568
Query: 90 GKTGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP 143
G GP G A GEKG QGE G +GP+G G G +G GP GPKG+RG +GDPG+
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMT 628
Query: 144 G 144
G
Sbjct: 629 G 629
Score = 97.1 bits (240), Expect = 2e-20
Identities = 52/123 (42%), Positives = 64/123 (52%), Gaps = 18/123 (14%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA------ 98
G G PG G G PGP G GL G G G +GEKG++G GL G GP+G+
Sbjct: 557 GEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPK 616
Query: 99 GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 146
GE+G +G+ G GP G +G +GE G G GPKGD+G+QG PGL C
Sbjct: 617 GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 676
Query: 147 RCG 149
G
Sbjct: 677 PLG 679
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 387 PGPPGLPG 394
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480
Score = 79.0 bits (193), Expect = 5e-15
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
++G GP G G G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290
Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325
Score = 78.2 bits (191), Expect = 8e-15
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
GP+GL GK G GP+G+ G GP G PGP+G +GE+G G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GPIG +G+ KG++G GPPG G +G++G+ G G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G GPPG PG G PG G IGL DG+ G G KG GL G G G G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
G++G+ G K P+ G + +
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 114 bits (284), Expect = 1e-25
Identities = 55/102 (53%), Positives = 63/102 (61%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG G+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGL 567
Score = 100 bits (248), Expect = 2e-21
Identities = 59/125 (47%), Positives = 67/125 (53%), Gaps = 24/125 (19%)
Query: 44 PGLPGPPGPPGANG---SPGPHGRIGLPGRDGRDGRKGEKGEK---GTAGLRGKTGPLGL 97
PG GPPG G NG SPG G G G+ G G KGE GEK G GL+G GP G
Sbjct: 517 PGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGE 576
Query: 98 A------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGDRGEQGD 139
A GEKG QGE G +GP+ GP G G +G GP GPKG+RG +GD
Sbjct: 577 AGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD 636
Query: 140 PGLPG 144
PG+ G
Sbjct: 637 PGMTG 641
Score = 98.2 bits (243), Expect = 8e-21
Identities = 54/109 (49%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG------EKGTAGLRGKTGPLGLA 98
G PGP GPPG +G PG G G PG G G KGE G EKG AG +G G GL
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568
Query: 99 GEKGDQGETG---KKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G +GE G KG G +GEKG+ GP+G PG G G G PG PG
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPG 617
Score = 97.8 bits (242), Expect = 1e-20
Identities = 49/100 (49%), Positives = 59/100 (59%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G PG GPPG G PG G G+ G +G G GEKGEKG G G G G AGEKG+
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G +G GP+GE G G G G +G++G++G GLPG
Sbjct: 563 GAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPG 602
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 387 PGPPGLPG 394
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Score = 90.1 bits (222), Expect = 2e-18
Identities = 54/135 (40%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G G PG G G PGP G GL G G G +GEKG++G GL G +G G G G
Sbjct: 557 GEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 616
Query: 105 GETGKKGPIGPEGEKGE------VGPI---------GPP---------------GPKGDR 134
G G GP GP+GE+G GP GPP GPKGD+
Sbjct: 617 GPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK 676
Query: 135 GEQGDPGLPGVCRCG 149
G+QG PGL C G
Sbjct: 677 GDQGAPGLDAPCPLG 691
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480
Score = 79.0 bits (193), Expect = 5e-15
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
++G GP G G G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290
Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325
Score = 78.2 bits (191), Expect = 8e-15
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 44 PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
PG PP GP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
GP+GL GK G GP+G+ G GP G PGP+G +GE+G G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 73.6 bits (179), Expect = 2e-13
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 49 PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
P PG N P GP GR GLPG G G G G G AGL GP G G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169
Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GPIG +G+ KG++G GPPG G +G++G+ G G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G GPPG PG G PG G IGL DG+ G G KG GL G G G G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
G++G+ G K P+ G + +
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 112 bits (281), Expect = 3e-25
Identities = 58/113 (51%), Positives = 67/113 (59%), Gaps = 12/113 (10%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPG------RDGRDGRKGEKGEKGTAG------LRGKT 92
G PGP GPPG G PG GR G PG RDG G KG++GE G AG G
Sbjct: 995 GPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAP 1054
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+G AG+ GD+GETG GP GP G G GP GP GP+GD+GE G+ G G+
Sbjct: 1055 GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGI 1107
Score = 105 bits (263), Expect = 4e-23
Identities = 51/102 (50%), Positives = 59/102 (57%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
+ G PG PGP G G PGP G+ G PG G G +G+ G G G +G G G AGE+G
Sbjct: 540 LTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERG 599
Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G GP G +GE G GP GP GP G+RGEQG G PG
Sbjct: 600 VPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPG 641
Score = 105 bits (262), Expect = 5e-23
Identities = 54/120 (45%), Positives = 63/120 (52%)
Query: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
P G Q G P+ PG PG G GA G PGP G G PG G +G++G +GE G
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476
Query: 85 TAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GL G G G G +G G G GP GP GE+G GP GP G G+ G G+ GLPG
Sbjct: 477 PTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPG 536
Score = 102 bits (255), Expect = 3e-22
Identities = 61/133 (45%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPG---PPGPPGANGSPGPHGRIGLPGRDGRDGRK 77
A GQP KG N +P I PG PG P GP G G PGP G G PG G G
Sbjct: 390 ADGQPGA---KGANGAPG-IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445
Query: 78 GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP------GPK 131
G KGE G G++G GP G G++G +GE G G GP GE+G G G P GPK
Sbjct: 446 GAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPK 505
Query: 132 GDRGEQGDPGLPG 144
G GE+G PG G
Sbjct: 506 GPAGERGSPGPAG 518
Score = 100 bits (250), Expect = 1e-21
Identities = 50/101 (49%), Positives = 56/101 (55%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G+ GP GP G GSPGP G G PG GR G G G KG G G GP G G G
Sbjct: 500 GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 559
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G+ G+ GP GP G +G+ G +G PGPKG GE G G GV
Sbjct: 560 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV 600
Score = 100 bits (250), Expect = 1e-21
Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
A+G P + KG+ PG PG G PG G PG G GLPG G G G K
Sbjct: 699 ANGAPGNDGAKGD-------AGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPK 751
Query: 81 GEKGTA---GLRGKTGPL---GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDR 134
G G+ G+RG TGP+ G AG GD+GE+G GP GP G +G G G PGP G
Sbjct: 752 GADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPA 811
Query: 135 GEQGDPGLPG 144
G G PG G
Sbjct: 812 GFAGPPGADG 821
Score = 100 bits (250), Expect = 1e-21
Identities = 50/100 (50%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G PGPPGP G GSPG G G P G G +G G++G GL G+ G G G G
Sbjct: 923 GPPGPPGPAGEKGSPGADGPAGAP---GTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPS 979
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GE GK+GP G GE+G GP+GPPG G GE G G PG
Sbjct: 980 GEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019
Score = 100 bits (248), Expect = 2e-21
Identities = 63/140 (45%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIG------LPGRDGRDGR 76
G P + +GE P + G PGP GP GANG+PG G G PG G G
Sbjct: 668 GAPGPSGARGERGFPGER-GVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGL 726
Query: 77 KGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKG------PIGPEG------EKGEVGP 124
+G GE+G AGL G G G AG KG G GK G PIGP G +KGE GP
Sbjct: 727 QGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGP 786
Query: 125 IGPPGPKGDRGEQGDPGLPG 144
GP GP G RG GD G PG
Sbjct: 787 SGPAGPTGARGAPGDRGEPG 806
Score = 98.2 bits (243), Expect = 8e-21
Identities = 51/103 (49%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 45 GLPGPPGPPGANGS------PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
G PGPPGPPGA G PGP G G PG+ G G G G G AG G+ G G
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP 622
Query: 99 GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
G G GE G++GP G G +G GP GPPG G GEQG PG
Sbjct: 623 GPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG 665
Score = 97.8 bits (242), Expect = 1e-20
Identities = 49/100 (49%), Positives = 52/100 (52%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G G PG PG G PGP G GLPG G G KG +G G G +G GP G GE G
Sbjct: 233 GEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSP 292
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GE G G +GP G GE G G PGP G RG G G G
Sbjct: 293 GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAG 332
Score = 97.1 bits (240), Expect = 2e-20
Identities = 49/100 (49%), Positives = 57/100 (57%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GPPGPPG NG G G+ G PG G G +G +G GTAGL G G G +G G +
Sbjct: 218 GPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAK 277
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G+ G GP G G GE G G GP+G GE+G PG PG
Sbjct: 278 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPG 317
Score = 96.7 bits (239), Expect = 2e-20
Identities = 48/100 (48%), Positives = 57/100 (57%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GP GPPGA G+PG G +G G+ G G G G G G G GP G G +GD+
Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDK 1096
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GETG++G G +G +G G GPPGP G GEQG G G
Sbjct: 1097 GETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG 1136
Score = 96.3 bits (238), Expect = 3e-20
Identities = 59/138 (42%), Positives = 70/138 (50%), Gaps = 19/138 (13%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR---DGRKG 78
+G P L G SP G GPPGP G +G PGP G G G+ G G KG
Sbjct: 532 AGLPGAKGLTGSPGSP----GPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKG 587
Query: 79 EKGEKGTAGLRGKTGP---LGLAGEKGDQGETGKKGPIGPEGEKGEVGPI---------G 126
GE G AG RG GP +G AG+ G+ G G GP GP GE+GE GP G
Sbjct: 588 AAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPG 647
Query: 127 PPGPKGDRGEQGDPGLPG 144
P GP G+ G+ G+ G+PG
Sbjct: 648 PAGPPGEAGKPGEQGVPG 665
Score = 96.3 bits (238), Expect = 3e-20
Identities = 47/100 (47%), Positives = 53/100 (53%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G PGPPGP G G PG G+ G G G G KG+ G G AG G GP+G G G +
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAK 862
Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G GP G G G G +GPPGP G+ G G PG G
Sbjct: 863 GARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAG 902
Score = 95.9 bits (237), Expect = 4e-20
Identities = 50/109 (45%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GP GP GA G GP G G G G G +G KG +G +GL+G GP G GE+G
Sbjct: 1073 GPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPS 1132
Query: 105 GETGKKGPIGPEGEKGEVG---------PIGPPGPKGDRGEQGDPGLPG 144
G +G GP GP G G G PIGPPGP+G G+ G G PG
Sbjct: 1133 GASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPG 1181
Score = 95.5 bits (236), Expect = 5e-20
Identities = 55/139 (39%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
A GQP G+ G GPPGP G G PGP G +G PG G G G
Sbjct: 819 ADGQPGAKGEPGD-------AGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP 871
Query: 81 GEKGTAGLRGKTGPLGLAGEKGD---------QGETGKKGPIGPEGEKGEVGPIGPPGPK 131
G G G G+ GP G +G G +G G +G GP G GEVGP GPPGP
Sbjct: 872 GATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931
Query: 132 GDRGE------QGDPGLPG 144
G++G G PG PG
Sbjct: 932 GEKGSPGADGPAGAPGTPG 950
Score = 95.5 bits (236), Expect = 5e-20
Identities = 51/112 (45%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G GPPG PGA G+PGP G G G G G G G G G RG GP G G+KG+
Sbjct: 1040 GPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGET 1099
Query: 105 GE------------TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
GE +G +GP GP G GE GP G GP G RG G G PG
Sbjct: 1100 GEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPG 1151
Score = 94.4 bits (233), Expect = 1e-19
Identities = 51/108 (47%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE-- 100
+ G PGPPGP GA G G G G PG G +G G G G G RG +GP G G
Sbjct: 369 VRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPG 428
Query: 101 -KGDQGETGKKGPIGPEGEKGEVGPI---GPPGPKGDRGEQGDPGLPG 144
KG+ GE G G G G KGE GP+ GPPGP G+ G++G G PG
Sbjct: 429 PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476
Score = 93.2 bits (230), Expect = 2e-19
Identities = 49/101 (48%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PG G PGPPG G PG G PG DG G KG GE+G+ G G G G AG G+
Sbjct: 475 PGPTGLPGPPGERGGPGSR---GFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE 531
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G KG G G G G GPPGP G G G PG PG
Sbjct: 532 AGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572
Score = 93.2 bits (230), Expect = 2e-19
Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 40 ICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
+ PG G PG G G PGP G +G G+DG G +G G G AG RG+ GP G
Sbjct: 579 VMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 638
Query: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G +G G G G G GE+G G +G PGP G RGE+G PG GV
Sbjct: 639 SPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV 687
Score = 92.8 bits (229), Expect = 3e-19
Identities = 51/110 (46%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRK---GEKGEKGTAGLRGKTGPLGLAGE 100
PG G PG GANG+PG G G PG G G + G G KG +G G G G G
Sbjct: 388 PGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGA 447
Query: 101 KGDQGETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
KG+ G G +GP GP GE +GE GP G PGP G+RG G G PG
Sbjct: 448 KGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Score = 92.4 bits (228), Expect = 4e-19
Identities = 50/109 (45%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE---KGEKGTAGLRGKTGPLGLAGEK 101
G G PG PG NG+PG G GLPG GR G G +G G G G GP G AG
Sbjct: 284 GPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 343
Query: 102 GDQGETGKKGPIGPEGEKGEVGPIG------PPGPKGDRGEQGDPGLPG 144
G G G KG GP+G +G GP G PPGP G G G+PG G
Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG 392
Score = 92.4 bits (228), Expect = 4e-19
Identities = 49/106 (46%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G PGP G PG G GP G G G G G +GE G G AG G G G G KG+
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 105 GETGKKGPIGPEGEKGEVGPIGP------PGPKGDRGEQGDPGLPG 144
G+ G KG GP G G GP GP PG KG RG G PG G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATG 875
Score = 92.0 bits (227), Expect = 5e-19
Identities = 53/127 (41%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 44 PGLPGPPGPPGANGSPGPHGR----------------IGLPGRDGRDGRKGEKGEKGTAG 87
PGLPGPPGPPG G PG G I +PG G G +G G G G
Sbjct: 138 PGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPG 197
Query: 88 LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIG---------PPGPKGDRGEQG 138
+G GP G GE G G G +GP GP G+ G+ G G PPGP+G RG G
Sbjct: 198 PQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPG 257
Query: 139 DPGLPGV 145
GLPG+
Sbjct: 258 TAGLPGM 264
Score = 92.0 bits (227), Expect = 5e-19
Identities = 52/114 (45%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 31 KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRG 90
KGE SP PG GP G PG G PG G G G DG G G G G AG G
Sbjct: 286 KGEPGSPGEN-GAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 344
Query: 91 KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G +G GE G QG G +GP G GE G GP G GP G+ G G PG G
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKG 398
Score = 92.0 bits (227), Expect = 5e-19
Identities = 60/142 (42%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 21 ASGQPRGNQLKGENYSPRYICSIPGLPGP------PGPPGANGSPGPHGRIGLPGRDGR- 73
A G+P KG+ P G PGP PG GA GS GP G G PG GR
Sbjct: 825 AKGEPGDAGAKGDA-GPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRV 883
Query: 74 -----DGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP- 127
G G G G AG G GP G G G GE G GP GP GEKG G GP
Sbjct: 884 GPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPA 943
Query: 128 -----PGPKGDRGEQGDPGLPG 144
PGP+G G++G GLPG
Sbjct: 944 GAPGTPGPQGIAGQRGVVGLPG 965
Score = 91.3 bits (225), Expect = 9e-19
Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
G P +G + P PG G GPPG +G+ GP G G G++G G +GE G
Sbjct: 857 GAPGAKGARG-SAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGP 915
Query: 83 KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
G G G GP G AGEKG G G G G G +G G G G G RGE+G PGL
Sbjct: 916 AGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 975
Query: 143 PG 144
PG
Sbjct: 976 PG 977
Score = 90.9 bits (224), Expect = 1e-18
Identities = 59/158 (37%), Positives = 69/158 (43%), Gaps = 40/158 (25%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG---------------------- 60
G P N GE P PG GPPGP GA G PG
Sbjct: 224 GPPGKNGDDGEAGKP----GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 279
Query: 61 --PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGE 118
P G G PG G +G G+ G +G G RG+ G G AG +G+ G TG GP GP G
Sbjct: 280 AGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGP 339
Query: 119 ------------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
KGE GP GP G +G +G +G+PG PG
Sbjct: 340 AGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPG 377
Score = 90.5 bits (223), Expect = 2e-18
Identities = 49/103 (47%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 45 GLPGPPGPPGANGSPGPHGRIG---LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
G PGP GP G G GP G G LPG G G G+ GE+G G G GP G GE+
Sbjct: 620 GPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 679
Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GE G +GP GP G +G G G G KGD G G PG G
Sbjct: 680 GFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQG 722
Score = 90.1 bits (222), Expect = 2e-18
Identities = 50/106 (47%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 45 GLPGPPG------PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
GLPGP G P GA+GSPG G GL G G G G G+KG +G G GP G
Sbjct: 737 GLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR 796
Query: 99 GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GD+GE G GP G G G G G G GD G +GD G PG
Sbjct: 797 GAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPG 842
Score = 89.7 bits (221), Expect = 3e-18
Identities = 49/112 (43%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
GLPGP GPPG G PG G G G G G +GE+G G G++G GP G G G
Sbjct: 644 GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAP 703
Query: 105 GETGKKGPIGP------------EGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G KG G +G GE G G PGPKGDRG+ G G G
Sbjct: 704 GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADG 755
Score = 89.4 bits (220), Expect = 4e-18
Identities = 56/137 (40%), Positives = 64/137 (46%), Gaps = 36/137 (26%)
Query: 44 PGLPGPPG---PPGANGS------------------PGPHGRIGLPGRDGRDGRKGEKGE 82
PG PGP G PPGA+G PGP G G PG G G G KG
Sbjct: 805 PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGA 864
Query: 83 KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGP---------EGEKGEVGP------IGP 127
+G+AG G TG G AG G G +G GP GP +G +GE GP +GP
Sbjct: 865 RGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGP 924
Query: 128 PGPKGDRGEQGDPGLPG 144
PGP G GE+G PG G
Sbjct: 925 PGPPGPAGEKGSPGADG 941
Score = 89.0 bits (219), Expect = 5e-18
Identities = 50/109 (45%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
G+PGPPG G G G G G PG G G +GE+G G+ G +G GP G GE G
Sbjct: 599 GVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKP 658
Query: 105 GE------TGKKGPIGPEGEK---GEVGPIGPPGPKGDRGEQGDPGLPG 144
GE G GP G GE+ GE G GPPGP G RG G PG G
Sbjct: 659 GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDG 707
Score = 89.0 bits (219), Expect = 5e-18
Identities = 48/106 (45%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 45 GLPGPPGPPGANGS------PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
G PG PGP G G PG G G PG G G G++G G +G RG GP+G
Sbjct: 944 GAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003
Query: 99 GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G GE+G++G G EG G G PG KGDRGE G G PG
Sbjct: 1004 GLAGPPGESGREGAPGAEGSPGR---DGSPGAKGDRGETGPAGPPG 1046
Score = 88.2 bits (217), Expect = 8e-18
Identities = 49/105 (46%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 46 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
+PGP GP G G PGP G PG G G GE GE G +G G GP G G+ GD G
Sbjct: 177 VPGPMGPSGPRGLPGPPGA---PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDG 233
Query: 106 ETGK------KGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
E GK +GP GP+G +G G G PG KG RG G G G
Sbjct: 234 EAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG 278
Score = 87.8 bits (216), Expect = 1e-17
Identities = 57/152 (37%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 23 GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGS---------PGPHGRIGLPGRDGR 73
G P N G+ PR + G PG PGP GA G+ PGP G G PG G
Sbjct: 290 GSPGENGAPGQ-MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGA 348
Query: 74 DGRKGE------KGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPE----------- 116
G KGE +G +G G+RG+ GP G AG G G G G G +
Sbjct: 349 VGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA 408
Query: 117 ----GEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G +G GP GP GP G +G G+PG PG
Sbjct: 409 PGFPGARGPSGPQGPGGPPGPKGNSGEPGAPG 440
Score = 85.9 bits (211), Expect = 4e-17
Identities = 46/101 (45%), Positives = 52/101 (51%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PG G PGP G G G G G+PG G G G +GE+G G RG GP G AG +G
Sbjct: 640 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G G G G G G G PG +G GE+G GLPG
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPG 740
Score = 85.5 bits (210), Expect = 5e-17
Identities = 51/121 (42%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 37 PRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR-------------DGRKGEKGEK 83
PR PG G PG PG G PGP G G PG G G G
Sbjct: 122 PRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPM 181
Query: 84 GTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP 143
G +G RG GP G G +G QG G+ G G G G GP GPPG GD GE G PG P
Sbjct: 182 GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP 241
Query: 144 G 144
G
Sbjct: 242 G 242
Score = 85.1 bits (209), Expect = 7e-17
Identities = 46/104 (44%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 45 GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE---K 101
G GP GP G+ G G G G PG G G G G G G +G G G+AG
Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP 412
Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G +G +G +GP GP G KG G G PG KGD G +G+PG GV
Sbjct: 413 GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGV 456
Score = 82.8 bits (203), Expect = 3e-16
Identities = 43/103 (41%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-LGLAGEK 101
+ G G GP G G GP GR G+PG+ G G G G G GL G P L ++
Sbjct: 110 VEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDE 169
Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G GP+GP G +G GP G PGP+G +G G+PG PG
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPG 212
Score = 78.2 bits (191), Expect = 8e-15
Identities = 45/116 (38%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 25 PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
PRG++ + R I G G GPPG GSP G +G G G
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSP---------------GEQGPSGASG 1136
Query: 85 TAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
AG RG G G G+ G G G GP GP G G+ GP+GPPGP G G G P
Sbjct: 1137 PAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPP 1192
Score = 55.1 bits (131), Expect = 7e-08
Identities = 41/117 (35%), Positives = 43/117 (36%), Gaps = 20/117 (17%)
Query: 47 PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
PG P G P G P G +G KG+ G G RG GP G G G G
Sbjct: 82 PGAEVPEGECCPVCPDGSES-PTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGL 140
Query: 107 TGKKGPIGPEGEKGEVGPI-------------------GPPGPKGDRGEQGDPGLPG 144
G GP GP G G G GP GP G RG G PG PG
Sbjct: 141 PGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPG 197
Score = 47.0 bits (110), Expect = 2e-05
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 99 GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G +G +G+TG +GP GP G G G G PG G G G PG PG+
Sbjct: 109 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGL 155
Score = 28.1 bits (61), Expect = 9.7
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 44 PGLPGPPGPPGA 55
PG PGPPGPP A
Sbjct: 1183 PGPPGPPGPPSA 1194
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 112 bits (281), Expect = 3e-25
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG +PG+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 569
Score = 108 bits (269), Expect = 7e-24
Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
+G P GE +P +PGLPGP PGPPG G PGP G GL G G G +G
Sbjct: 547 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 604
Query: 79 EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
EKG++G GL G + GP+G+ G G +GE G K
Sbjct: 605 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 664
Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
GP G +G +GE G G GPKGD+G+QG PGL C G
Sbjct: 665 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 705
Score = 92.8 bits (229), Expect = 3e-19
Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)
Query: 42 SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
SI G PGPPGPPG +G PGP G GLPG G G G KGE+G G+
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326
Query: 90 GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
GK G G +AG KG+ G G KG G EG G G +G G KGD RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386
Query: 137 QGDPGLPG 144
G PGLPG
Sbjct: 387 PGPPGLPG 394
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494
Score = 90.9 bits (224), Expect = 1e-18
Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
+ G G PG PG G G G+ G PG G G KG +G G GL+G
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 584
Query: 92 TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
GP G A GEKG QGE G +GP+ GP G G +G GP GPKG+
Sbjct: 585 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 644
Query: 134 RGEQGDPGLPG 144
RG +GDPG+ G
Sbjct: 645 RGSKGDPGMTG 655
Score = 87.0 bits (214), Expect = 2e-17
Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 19/109 (17%)
Query: 41 CSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
C+ P PGPPGP G G PG G IG+PGR G G +G G+ GT G G
Sbjct: 117 CNCP--PGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174
Query: 93 GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
GP+GL GK G GP+G+ G GP G PGP+G +GE+G G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480
Score = 79.0 bits (193), Expect = 5e-15
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230
Query: 88 -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
++G GP G G G G G
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290
Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325
Score = 78.2 bits (191), Expect = 8e-15
Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PG PPGPPG P GR GLPG G G G G G AGL GP G G+ G
Sbjct: 115 PGCNCPPGPPG------PTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGT 167
Query: 104 QGETGKKGPIGPEGEKGEVGP---IGPPGPKGDRGEQGDPGLPGVC 146
+G G GPIG +G+ G GP +G GP G G QG G G C
Sbjct: 168 RGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQC 213
Score = 70.9 bits (172), Expect = 1e-12
Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G GPPG PG G PG G IGL DG+ G G KG GL G G G G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
G++G+ G K P+ G + +
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
GP GPPGP G G G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291
Score = 51.2 bits (121), Expect = 1e-06
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 73 RDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
R R+ K G G GP G G GD+G G G +G G+ G + IGP GP G
Sbjct: 105 RRRREAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAG-LSIIGPRGPPG 163
Query: 133 DRGEQGDPGLPG 144
G +G PG PG
Sbjct: 164 QPGTRGFPGFPG 175
Score = 28.9 bits (63), Expect = 5.7
Identities = 35/132 (26%), Positives = 47/132 (35%), Gaps = 42/132 (31%)
Query: 55 ANGSPGPHGRIGLPGRDGRDGRKGEKGEK----GTAGLRG-------------------K 91
A G+ GP G +G PG + E+G + G+ GL +
Sbjct: 11 ATGARGP-GELGAPGTVALVAARAERGARLPSPGSCGLLTLALCSLALSLLAHFRTAELQ 69
Query: 92 TGPLGLAGEKGDQG-ETGKKGPIG-----------------PEGEKGEVGPIGPPGPKGD 133
L L E+G+Q ET G + P+ G P GPPGP G
Sbjct: 70 ARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTGR 129
Query: 134 RGEQGDPGLPGV 145
G GD G G+
Sbjct: 130 PGLPGDKGAIGM 141
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 112 bits (281), Expect = 3e-25
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 404 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 463
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG +PG+
Sbjct: 464 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 507
Score = 108 bits (269), Expect = 7e-24
Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
+G P GE +P +PGLPGP PGPPG G PGP G GL G G G +G
Sbjct: 485 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 542
Query: 79 EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
EKG++G GL G + GP+G+ G G +GE G K
Sbjct: 543 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 602
Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
GP G +G +GE G G GPKGD+G+QG PGL C G
Sbjct: 603 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 643
Score = 95.9 bits (237), Expect = 4e-20
Identities = 48/101 (47%), Positives = 56/101 (55%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G G A +G
Sbjct: 150 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGP 209
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G GP GP G G GP+GPPG G G +GDPG+ G
Sbjct: 210 PGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 250
Score = 92.8 bits (229), Expect = 3e-19
Identities = 61/147 (41%), Positives = 69/147 (46%), Gaps = 28/147 (19%)
Query: 20 CASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE 79
C RG Q + P PG PGPPGP G G PG G +G PG G G KG+
Sbjct: 192 CGEYPHRGEQSQASIQGP------PGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGD 245
Query: 80 ---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPI 125
KGE+G G+ GK G G +AG KG+ G G KG G EG G G +
Sbjct: 246 PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 305
Query: 126 GPPGPKGD--------RGEQGDPGLPG 144
G G KGD RGE G PGLPG
Sbjct: 306 GQKGEKGDAGNSIGGGRGEPGPPGLPG 332
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 317 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 376
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 377 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 432
Score = 90.9 bits (224), Expect = 1e-18
Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
+ G G PG PG G G G+ G PG G G KG +G G GL+G
Sbjct: 463 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 522
Query: 92 TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
GP G A GEKG QGE G +GP+ GP G G +G GP GPKG+
Sbjct: 523 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 582
Query: 134 RGEQGDPGLPG 144
RG +GDPG+ G
Sbjct: 583 RGSKGDPGMTG 593
Score = 87.8 bits (216), Expect = 1e-17
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE---KGEKGTAGLRGKTGPLGLAG 99
+ G PG PGP G G GP G+ G G+ G G+ GE +GE+ A ++G GP G G
Sbjct: 158 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPG 217
Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
G G G GP+GP G G GP G PG +G G +G+ G+PG+
Sbjct: 218 PSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 263
Score = 85.1 bits (209), Expect = 7e-17
Identities = 47/115 (40%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 44 PGLPGPP--------------GPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLR 89
PG PP GP G G PG G G PG G DG+ G G KG GL
Sbjct: 115 PGCNCPPAPQGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLT 174
Query: 90 GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G G G+KG++G+ G+ G + + GP GPPGP G G G PGLPG
Sbjct: 175 GPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 229
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 315 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 370
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 371 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 430
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 431 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 477
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 276 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 335
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 336 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 395
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 396 RTLALMGPPGLPGQIGPPGAPGI 418
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/100 (38%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 49 PPGPPGANGSPGPHGRIGLPGRDGRD--GRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
P PG N P P G PG G G +G G+ GT G G GP+GL
Sbjct: 111 PKTSPGCNCPPAPQGS---PGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL--------- 158
Query: 107 TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 146
GK G GP+G+ G GP G P G QG G G C
Sbjct: 159 DGKPGHPGPKGDMGLTGPPGQP------GPQGQKGEKGQC 192
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 112 bits (281), Expect = 3e-25
Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
PGLPG GPPGA G PG G IGLPG G DG KG +G+ G G G GP G G G
Sbjct: 406 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 465
Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
+GE G G G +GEKGE G G PG KG+ GE+G+PG +PG+
Sbjct: 466 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 509
Score = 108 bits (269), Expect = 7e-24
Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)
Query: 22 SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
+G P GE +P +PGLPGP PGPPG G PGP G GL G G G +G
Sbjct: 487 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 544
Query: 79 EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
EKG++G GL G + GP+G+ G G +GE G K
Sbjct: 545 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 604
Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
GP G +G +GE G G GPKGD+G+QG PGL C G
Sbjct: 605 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 645
Score = 94.4 bits (233), Expect = 1e-19
Identities = 67/153 (43%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 20 CASGQP---RGNQ---LKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
C S P R +Q LKGE S I PG PGPPGP G G PG G +G PG G
Sbjct: 183 CLSSMPAALRSSQIIALKGEQ-SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP 241
Query: 74 DGRKGE---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEK 119
G KG+ KGE+G G+ GK G G +AG KG+ G G KG G EG
Sbjct: 242 PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSP 301
Query: 120 GEVGPIGPPGPKGD--------RGEQGDPGLPG 144
G G +G G KGD RGE G PGLPG
Sbjct: 302 GLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPG 334
Score = 92.0 bits (227), Expect = 5e-19
Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
SI G G PGPPG G PGP G G+ G+ G G+ G+KGE+G AG +G GP G GE
Sbjct: 319 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 378
Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
G G I GP G G++GP G PG G +GE G PG PG
Sbjct: 379 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 434
Score = 90.9 bits (224), Expect = 1e-18
Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)
Query: 43 IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
+ G G PG PG G G G+ G PG G G KG +G G GL+G
Sbjct: 465 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 524
Query: 92 TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
GP G A GEKG QGE G +GP+ GP G G +G GP GPKG+
Sbjct: 525 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 584
Query: 134 RGEQGDPGLPG 144
RG +GDPG+ G
Sbjct: 585 RGSKGDPGMTG 595
Score = 87.4 bits (215), Expect = 1e-17
Identities = 49/133 (36%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 44 PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
PG PGP G G G PGP G +GL G G+ G +G+KGEKG G
Sbjct: 133 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 192
Query: 88 ---------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
++G GP G G G G G GP+GP G G GP G PG +G
Sbjct: 193 SSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 252
Query: 133 DRGEQGDPGLPGV 145
G +G+ G+PG+
Sbjct: 253 YHGRKGERGMPGM 265
Score = 84.7 bits (208), Expect = 9e-17
Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)
Query: 27 GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
GN + G P PGLPGPPGP G G PG G G G G DG K
Sbjct: 317 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 372
Query: 78 GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
G KGE G GL G+ GP G G G +GE G GP
Sbjct: 373 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 432
Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
G +GEKG ++GP GP GP KG+ G G PG G
Sbjct: 433 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 479
Score = 84.0 bits (206), Expect = 1e-16
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 42 SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
++ G+ G PG PG G G G GLPG G+ G KG+ G
Sbjct: 278 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 337
Query: 83 -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
KG AG+ G+ GP G G+KG++G G++GP GP+G KGE G
Sbjct: 338 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 397
Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
+ GP G G+ G PG PG+
Sbjct: 398 RTLALMGPPGLPGQIGPPGAPGI 420
Score = 77.4 bits (189), Expect = 1e-14
Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 47 PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
PG PP G PG G G PG G DG+ G G KG GL G G G G+KG++G+
Sbjct: 115 PGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQ 174
Query: 107 TGK----------------KGPIGPEGEKGEV---GPIGPPGPKGDRGEQGDPGLPG 144
G+ I +GE+ + GP GPPGP G G G PGLPG
Sbjct: 175 CGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 231
Score = 42.4 bits (98), Expect = 5e-04
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 15/67 (22%)
Query: 80 KGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD 139
+G+ GT G G GP+GL GK G GP+G+ G GP G P G QG
Sbjct: 124 QGQPGTRGFPGFPGPIGL---------DGKPGHPGPKGDMGLTGPPGQP------GPQGQ 168
Query: 140 PGLPGVC 146
G G C
Sbjct: 169 KGEKGQC 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.143 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,240,234
Number of Sequences: 37866
Number of extensions: 1059656
Number of successful extensions: 38057
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 4399
Number of HSP's gapped (non-prelim): 7109
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.