Guide to the Human Genome
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Search of human proteins with 206597452

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
         (296 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|206597452 C1q and tumor necrosis factor related protein 7 iso...   625   e-179
gi|13994280 C1q and tumor necrosis factor related protein 7 isof...   611   e-175
gi|206597454 C1q and tumor necrosis factor related protein 7 iso...   611   e-175
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom...   349   2e-96
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom...   192   4e-49
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]          192   4e-49
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho...   189   2e-48
gi|122937273 hypothetical protein LOC131149 [Homo sapiens]            168   5e-42
gi|4757760 adiponectin precursor [Homo sapiens]                       167   1e-41
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]               159   3e-39
gi|14149712 C1q and tumor necrosis factor related protein 5 prec...   149   4e-36
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]       146   2e-35
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]       146   2e-35
gi|87298828 complement component 1, q subcomponent, B chain prec...   137   1e-32
gi|56786155 complement component 1, q subcomponent, C chain prec...   133   2e-31
gi|166235903 complement component 1, q subcomponent, C chain pre...   133   2e-31
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ...   128   7e-30
gi|7705753 complement component 1, q subcomponent, A chain precu...   125   4e-29
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s...   123   2e-28
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]      116   3e-26
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]       116   3e-26
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]      115   6e-26
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]      115   6e-26
gi|154937344 complement component 1, q subcomponent-like 2 [Homo...   114   1e-25
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]      114   1e-25
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]       114   1e-25
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]     112   3e-25
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]     112   3e-25
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]      112   3e-25
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]      112   3e-25

>gi|206597452 C1q and tumor necrosis factor related protein 7
           isoform a [Homo sapiens]
          Length = 296

 Score =  625 bits (1612), Expect = e-179
 Identities = 296/296 (100%), Positives = 296/296 (100%)

Query: 1   MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG 60
           MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG
Sbjct: 1   MSRQEPKMFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG 60

Query: 61  PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG 120
           PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG
Sbjct: 61  PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKG 120

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN 180
           EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN
Sbjct: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFN 180

Query: 181 EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG 240
           EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG
Sbjct: 181 EGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASG 240

Query: 241 STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
           STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 STVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296


>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
           b [Homo sapiens]
          Length = 289

 Score =  611 bits (1576), Expect = e-175
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 8   MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
           MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL
Sbjct: 1   MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60

Query: 68  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
           PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP
Sbjct: 61  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120

Query: 128 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 187
           PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 180

Query: 188 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 247
           ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ
Sbjct: 181 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 240

Query: 248 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
           PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 289


>gi|206597454 C1q and tumor necrosis factor related protein 7
           isoform b [Homo sapiens]
          Length = 289

 Score =  611 bits (1576), Expect = e-175
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 8   MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
           MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL
Sbjct: 1   MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 60

Query: 68  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
           PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP
Sbjct: 61  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 120

Query: 128 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 187
           PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP
Sbjct: 121 PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNP 180

Query: 188 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 247
           ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ
Sbjct: 181 ATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQ 240

Query: 248 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 296
           PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Sbjct: 241 PEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL 289


>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
           sapiens]
          Length = 330

 Score =  349 bits (895), Expect = 2e-96
 Identities = 159/250 (63%), Positives = 192/250 (76%)

Query: 36  SPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPL 95
           SP+ +CS+PG  GPPGPPGA G  G  GR+G PG+DG+DG  G++G+ G  G  G+TG  
Sbjct: 76  SPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNR 135

Query: 96  GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKS 155
           G  G KG  G  G+ GP GP+G  G  G  G PG KG +G++G+PGLPG C CGS   KS
Sbjct: 136 GKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCGSGHTKS 195

Query: 156 AFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAI 215
           AFSV +T SYP ERLPI F+K+L NEG HYN ++GKF+C  PGIYYF+YDITLANKHLAI
Sbjct: 196 AFSVAVTKSYPRERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDITLANKHLAI 255

Query: 216 GLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLF 275
           GLVHNGQYRI+TFDANTGNHDVASGST++ L+  DEVWL+IF+++QNGLF DP W DSLF
Sbjct: 256 GLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSEQNGLFYDPYWTDSLF 315

Query: 276 SGFLLYVDTD 285
           +GFL+Y D D
Sbjct: 316 TGFLIYADQD 325



 Score = 36.2 bits (82), Expect = 0.035
 Identities = 20/54 (37%), Positives = 24/54 (44%)

Query: 91  KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           K  P  +    G QG  G  G  GP G  G +G  G  G  G  G++GD G  G
Sbjct: 74  KGSPQLVCSLPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEG 127



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 25  PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPG 69
           P+G         PR    + G PG  G PG  G  G  G  GLPG
Sbjct: 140 PKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG 184


>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
           sapiens]
          Length = 333

 Score =  192 bits (487), Expect = 4e-49
 Identities = 123/322 (38%), Positives = 166/322 (51%), Gaps = 62/322 (19%)

Query: 14  VTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
           + S   C  G P      G N        +PG  G  G  G  G  G  GR G PG+DG 
Sbjct: 17  INSQDTCRQGHPGIPGNPGHN-------GLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGT 69

Query: 74  DGRKGE------------KGEKGTAGLRGKTGPLGLAG---------EKGDQGETGKK-- 110
            G KGE            KG++G+ G  GK GP GLAG         E G QG+ G K  
Sbjct: 70  SGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGD 129

Query: 111 -GPIGPEGEKGEVGPIGP------------PGPKGDRGEQGDPGLPGV------------ 145
            GP GPEG +G +GP+GP            PGPKG+ G  G  G PGV            
Sbjct: 130 VGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGE 189

Query: 146 -CRCGS--IVLKSAFSVGIT--TSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIY 200
             + G   ++ KSAF+VG+T  + +P   +PI F+K+L+NE  HY+ A GKF C   G+Y
Sbjct: 190 KGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVY 249

Query: 201 YFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTD 260
           YF+Y IT+ ++++ + LV NG   + T DA   + D ASG  V+ L+  DEVWL++   +
Sbjct: 250 YFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGE 309

Query: 261 Q-NGLFSDPGWADSLFSGFLLY 281
           + NGLF+D    D+ F+GFLL+
Sbjct: 310 RFNGLFADED-DDTTFTGFLLF 330


>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
          Length = 680

 Score =  192 bits (487), Expect = 4e-49
 Identities = 114/276 (41%), Positives = 145/276 (52%), Gaps = 40/276 (14%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGL---RGKTGPLGLAGE 100
           PGLPGP G PG  G PG  G +G  G  G  G  GE G +G  G+   RG  GP G+ G 
Sbjct: 403 PGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGF 462

Query: 101 KGDQGETGKKGPIGPEG--EKGEVGPIGPPGPKGDRGEQGDPGLPG-----------VCR 147
            G +G+ G  GP GP G   KG  GP GPPGP G RG  G+PGLPG           V  
Sbjct: 463 PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMP 522

Query: 148 CGSI----------------------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY 185
            G I                      +  SAF+V ++ +YP    PI F+K+L+N  +HY
Sbjct: 523 EGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHY 582

Query: 186 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT-GNHDVASGSTVI 244
           +P TG F C  PGIYYFSY + +   H+ +GL  NG   + T+D  T G  D ASGS +I
Sbjct: 583 DPRTGIFTCQIPGIYYFSYHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 642

Query: 245 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLL 280
            L   D+VWL++   + NGL+S   +  S FSGFL+
Sbjct: 643 DLTENDQVWLQLPNAESNGLYSSE-YVHSSFSGFLV 677



 Score =  100 bits (249), Expect = 2e-21
 Identities = 54/114 (47%), Positives = 61/114 (53%), Gaps = 1/114 (0%)

Query: 31  KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRG 90
           KGE   P      PG  G  G PG++G PG  G+ GL G  G  G  G KG+ G  G  G
Sbjct: 361 KGET-GPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419

Query: 91  KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             GP+G AG KG  G  G+ GP G  G  G  GPIGPPG  G  G +GDPG PG
Sbjct: 420 LPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPG 473



 Score = 98.6 bits (244), Expect = 6e-21
 Identities = 60/127 (47%), Positives = 67/127 (52%), Gaps = 11/127 (8%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           A GQP     KG       +   PG+ GPPGPPG  G PG  G  G  G  G  G  G K
Sbjct: 271 APGQPGIPGTKG-------LPGAPGIAGPPGPPGF-GKPGLPGLKGERGPAGLPGGPGAK 322

Query: 81  GEKGTAGLRGK---TGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
           GE+G AGL GK   TGP G  G +G +G  G  G  GP+GE G  GP G PG KG+RG  
Sbjct: 323 GEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSP 382

Query: 138 GDPGLPG 144
           G  G PG
Sbjct: 383 GSDGKPG 389



 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 59/145 (40%), Positives = 76/145 (52%), Gaps = 14/145 (9%)

Query: 15  TSFAICASGQPRGNQLKGENYSPRYI--CSIPGLPGPPGPPG--ANGSPGPHGRIGLPG- 69
           T F I  + + +G  ++GE  +P         G PGP GPPG    GSPG  G  GLPG 
Sbjct: 40  TQFFIPYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGP 99

Query: 70  -------RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPE--GEKG 120
                  + G  G  G+ GE+G  G +G  GP GL G +G  G  G  GP G    G+ G
Sbjct: 100 PGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPG 159

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGV 145
           + GP G PGP+G  GE+G PG+PG+
Sbjct: 160 QQGPTGAPGPRGFPGEKGAPGVPGM 184



 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 10/111 (9%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG--------EKGTAGLRGKTG 93
           S+PG PG  GP GA G  G  G  G PG  G +G+KGE G        E+G  G +G TG
Sbjct: 153 SVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTG 212

Query: 94  PLGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
           P G    G++G+ G  G+ G  G  G  GE+GPIGPPGP+G  GE+G  G+
Sbjct: 213 PSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGI 263



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 58/128 (45%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
           G+P    LKGE    R    +PG PG  G  G  G PG  G  G PG  G  G KG  G 
Sbjct: 299 GKPGLPGLKGE----RGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGS 354

Query: 83  KGTAGLRGKTGPLGLA---GEKGDQGETGKKGPIGPEGEKGEVGPIGP---PGPKGDRGE 136
            G  G +G+TGP G A   G KG++G  G  G  G  G+ G  GP G    PGPKGD G 
Sbjct: 355 HGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGV 414

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 415 GGPPGLPG 422



 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 53/109 (48%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG---- 99
           PGLPGPPGP  A G PG  G  G PG  G  G KG+ G  G  G RG  GP G+ G    
Sbjct: 94  PGLPGPPGP-SAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGI 152

Query: 100 ----EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
               + G QG TG  GP G  GEKG  G  G  G KG+ G  G PG PG
Sbjct: 153 SVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMG-YGAPGRPG 200



 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 53/130 (40%), Positives = 62/130 (47%), Gaps = 6/130 (4%)

Query: 19  ICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           I   G+P G Q       PR      G PG PG  G  G  G +G  G PG  G  G +G
Sbjct: 152 ISVPGKP-GQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMG-YGAPGRPGERGLPGPQG 209

Query: 79  EKGEKGTAGL--RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP--GPKGDR 134
             G  G  G+  RG+ G  G  G KGD+G  G+ GPIGP G +G  G  GP   G  G  
Sbjct: 210 PTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAA 269

Query: 135 GEQGDPGLPG 144
           G  G PG+PG
Sbjct: 270 GAPGQPGIPG 279



 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 101 KGDQGETGKKGPIGPEGEKGEVGP-----IGPPGPKGDRGEQGDPGLPGVCRCG 149
           +G+QG  G  GP GP G  G  GP      G PG +G+ G  G PG   V + G
Sbjct: 56  RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPG 109



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 119 KGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGS 150
           +GE G  GPPGP G RG  G  G PG    GS
Sbjct: 56  RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGS 87


>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
           sapiens]
          Length = 333

 Score =  189 bits (481), Expect = 2e-48
 Identities = 116/294 (39%), Positives = 154/294 (52%), Gaps = 58/294 (19%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGT------------------- 85
           GLPG  G  GA G  G  G  G PG  G+DG  GEKGE+G                    
Sbjct: 38  GLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSP 97

Query: 86  --------------AGLRGKTGPLGLAGEKGDQGETGKKGP------------------I 113
                          GLRG+TGP G  G KGD G TG +GP                  I
Sbjct: 98  GKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPI 157

Query: 114 GPEGEKGEVGPIGP---PGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGIT--TSYPEE 168
           G  G KGE GP GP   PG +G RG +GD G  G      ++ KSAF+VG+T  + +P  
Sbjct: 158 GKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSS 217

Query: 169 RLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTF 228
            +PI F+K+L+NE  HY+ A GKF C   G+YYF+Y IT+ ++++ + LV NG   + T 
Sbjct: 218 DVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTR 277

Query: 229 DANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQ-NGLFSDPGWADSLFSGFLLY 281
           DA   + D ASGS V+ L+  DE+WL++   ++ NGLF+D    D+ F+GFLL+
Sbjct: 278 DAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADED-DDTTFTGFLLF 330



 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 45/100 (45%), Positives = 49/100 (49%), Gaps = 27/100 (27%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G PG PG PG NG         LPGRDGRDG KG+KG+               AGE G  
Sbjct: 26  GHPGIPGNPGHNG---------LPGRDGRDGAKGDKGD---------------AGEPGCP 61

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  GK G     GEKGE G  G    KG +G+QG  G PG
Sbjct: 62  GSPGKDGT---SGEKGERGADGKVEAKGIKGDQGSRGSPG 98



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 27/63 (42%), Positives = 31/63 (49%)

Query: 25  PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
           P G +    N  P     +PG  GP G PG  G  GP G  G PG  G  G KG++GEKG
Sbjct: 132 PTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKG 191

Query: 85  TAG 87
             G
Sbjct: 192 KIG 194



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           D    G  G  G  G  G  G  G  G KGD+G+ G+PG PG
Sbjct: 21  DTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPG 62


>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
          Length = 477

 Score =  168 bits (426), Expect = 5e-42
 Identities = 106/277 (38%), Positives = 145/277 (52%), Gaps = 19/277 (6%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           + G   GN  KGE      + S PGL G PG  G  G  G  G +G  G  G  G +G K
Sbjct: 195 SKGDTCGNCTKGEKGDQGAMGS-PGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERGGK 253

Query: 81  GEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP------GPKGD- 133
           G+KG  G++G+ G  G +G +G  G  G  G  G  G KGE G +GPP      GPKGD 
Sbjct: 254 GQKGEGGMKGEKGSKGDSGMEGKSGRNGLPGAKGDPGIKGEKGELGPPGLLGPTGPKGDI 313

Query: 134 --------RGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHY 185
                    G++G  G  G     + V +SAFS G++  +P   +PI F K+L+N+  +Y
Sbjct: 314 GNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLSKPFPPPNIPIKFEKILYNDQGNY 373

Query: 186 NPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANTGNH-DVASGSTVI 244
           +P TGKF C+ PG Y FSY IT+  +   I LV   + + K+ +   G   D AS   ++
Sbjct: 374 SPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQASLLVIL 433

Query: 245 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
            L   D+VWLE+   D NG++      DS+F+GFLLY
Sbjct: 434 KLSAGDQVWLEV-SKDWNGVYVS-AEDDSIFTGFLLY 468



 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 46/103 (44%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGR---DGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           G PGP G  G  G PGP G +G  G     G  G KGE+G++G  G  GK G  G  G K
Sbjct: 119 GQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPK 178

Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           GD+G  G  G  G +G KG+       G KGD+G  G PGL G
Sbjct: 179 GDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHG 221



 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 10/113 (8%)

Query: 41  CSIPGLPGPPGPPGANGSPGPHGR---IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGL 97
           C  P +PG  G PG  G PGP G    +G+PG  G  G +G +G KG  GL+G+ G  G+
Sbjct: 104 CCSP-VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGV 162

Query: 98  AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD------RGEQGDPGLPG 144
            G  G  G  G+ GP G +G  G  G  G  G KGD      +GE+GD G  G
Sbjct: 163 PGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMG 215



 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 49/116 (42%), Positives = 54/116 (46%), Gaps = 15/116 (12%)

Query: 44  PGLPGPPGP------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG- 96
           PG+ GP GP       G  G  G  G  G PG+ G  G  G KG+KG  GL G  G  G 
Sbjct: 136 PGVVGPQGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGS 195

Query: 97  --------LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
                     GEKGDQG  G  G  G  G KGE G +G  G  GD+G  GD G  G
Sbjct: 196 KGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGDSGERG 251



 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 33/79 (41%), Positives = 46/79 (58%)

Query: 67  LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIG 126
           +PG+ G  G  G+ G KG AG  G  GP G+ G +G +G  G+KG  G  G++G  G  G
Sbjct: 108 VPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPGYPG 167

Query: 127 PPGPKGDRGEQGDPGLPGV 145
            PG +G+ G +GD G  G+
Sbjct: 168 KPGAQGEPGPKGDKGNIGL 186


>gi|4757760 adiponectin precursor [Homo sapiens]
          Length = 244

 Score =  167 bits (422), Expect = 1e-41
 Identities = 102/243 (41%), Positives = 136/243 (55%), Gaps = 35/243 (14%)

Query: 50  PGPPGA-----NGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           P P GA      G PG  G  G PGRDGRDG  GEKGEKG           GL G KGD 
Sbjct: 30  PLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGEKGEKGDP---------GLIGPKGDI 80

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTS 164
           GETG  G  GP G          PG +G +GE G+         G+ V +SAFSVG+ T 
Sbjct: 81  GETGVPGAEGPRGF---------PGIQGRKGEPGE---------GAYVYRSAFSVGLETY 122

Query: 165 YPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYR 224
                +PI F K+ +N+  HY+ +TGKF C  PG+YYF+Y IT+  K + + L    +  
Sbjct: 123 VTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKVSLFKKDKAM 182

Query: 225 IKTFDA-NTGNHDVASGSTVIYLQPEDEVWLEIFFT-DQNGLFSDPGWADSLFSGFLLYV 282
           + T+D     N D ASGS +++L+  D+VWL+++   ++NGL++D    DS F+GFLLY 
Sbjct: 183 LFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADND-NDSTFTGFLLYH 241

Query: 283 DTD 285
           DT+
Sbjct: 242 DTN 244


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score =  159 bits (402), Expect = 3e-39
 Identities = 104/289 (35%), Positives = 137/289 (47%), Gaps = 52/289 (17%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTG--------- 93
           +PG  GPPGP G  G PG  GR G PG  G  G+KG+ G  G  GLRG +G         
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAG 472

Query: 94  ---PLGLAGEKGDQG-----------ETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD 139
              P GL G KG+ G           E G  GP GP G  G  G  GPPGP G  G  G 
Sbjct: 473 PIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGA 532

Query: 140 PG-----------LPGVCRCGSIVLKS----------------AFSVGITTSYPEERLPI 172
           PG           LP     G+++ K                 AF+  +T+ +P   +P+
Sbjct: 533 PGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPV 592

Query: 173 IFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-N 231
            F++ L+N    YNPATG F C   G+YYF+Y + +   ++ + L  N      T+D   
Sbjct: 593 KFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYK 652

Query: 232 TGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLL 280
            G  D ASG  V+ L+P D+VW+++     NGL+S   +  S FSGFLL
Sbjct: 653 KGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTE-YIHSSFSGFLL 700



 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 50/102 (49%), Positives = 57/102 (55%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
           +PG+ G  GP G  G PG  G  GLPG  G  G  G KGE G  G  G  G  G  G+KG
Sbjct: 389 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG 448

Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           D G  G+ G  GP G  G  GP GP GP+G  G +G+PGLPG
Sbjct: 449 DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPG 490



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 55/109 (50%), Positives = 63/109 (57%), Gaps = 9/109 (8%)

Query: 45  GLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
           G PGP GPPG +  G  GP G  G  G  G+ G +GE G +G  GLRG  GP GL G  G
Sbjct: 109 GQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSG 168

Query: 103 DQ--GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD-----PGLPG 144
               G+ G +G  GP G +GE GP G PGP GDRG +GD     PGLPG
Sbjct: 169 ITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPG 217



 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 56/136 (41%), Positives = 66/136 (48%), Gaps = 34/136 (25%)

Query: 44  PGLPGPPGPPGANGSPGPHG--------RIGLPGRDGRDGRKGEKGEKGTAGLRGKT--- 92
           PG+PGP G PGA G  GP G          GLPG  G  G KGE G +G  GL G T   
Sbjct: 257 PGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYG 316

Query: 93  -----------GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP------------IGPPG 129
                      GP G+ G  GD+GE G+ G  G +G +G  GP             GPPG
Sbjct: 317 MPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376

Query: 130 PKGDRGEQGDPGLPGV 145
           PKG+ G  G PG+PG+
Sbjct: 377 PKGEAGPGGPPGVPGI 392



 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 55/117 (47%), Positives = 59/117 (50%), Gaps = 17/117 (14%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPG-----RDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
           GLPGP GP GA G PG  G  GL G       G  G KG++G  G  GL G  G  G  G
Sbjct: 287 GLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDG 346

Query: 100 EKGDQGETGKKGPIG------------PEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           E G+QG  G  GP G            P G KGE GP GPPG  G RG+QG  GL G
Sbjct: 347 EPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAG 403



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 56/118 (47%), Positives = 60/118 (50%), Gaps = 19/118 (16%)

Query: 44  PGLPGPPGPPGANGSPGPHG-----------------RIGLPGRDGRDGRKGEKGEKGTA 86
           PG  G PGPPG  G PGP G                 + GLPG  G+ G  G  G  G A
Sbjct: 175 PGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPA 234

Query: 87  GLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           GL GK G  GL G  GD+GE+G  G  GP GE G VGP GPPG  G  G  G  GLPG
Sbjct: 235 GL-GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPGAAGLPG 290



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/109 (46%), Positives = 58/109 (53%), Gaps = 6/109 (5%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGL------PGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
           +PGL G  G PG +G PG  G  GL      PG  G  GR+G  G KG AG  G  G  G
Sbjct: 332 VPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPG 391

Query: 97  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           + G++G  G  GK G  G  G  G  GP GP GPKG+ G  G PG PGV
Sbjct: 392 IRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGV 440



 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 55/122 (45%), Positives = 68/122 (55%), Gaps = 7/122 (5%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
           G+P  +   GE   P+ +   PGLPG  G PG  G PGP G  G PG  G  G  G +G+
Sbjct: 340 GEPGEDGEPGEQ-GPQGLGGPPGLPGSAGLPGRRGPPGPKGEAG-PG--GPPGVPGIRGD 395

Query: 83  KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
           +G +GL GK    G+ GE+G  G  G  GP GP+GE G  G  G PG  G  G++GD GL
Sbjct: 396 QGPSGLAGKP---GVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGL 452

Query: 143 PG 144
           PG
Sbjct: 453 PG 454



 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 53/120 (44%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK------GEKGTAGLRGKTGPLG 96
           +PGLPGP G  G  G PG  G  G PG DG  G +G +      G  G+AGL G+ GP G
Sbjct: 317 MPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376

Query: 97  LAGE------------KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             GE            +GDQG +G  G  G  GE+G  G  GPPGP G +GE G  G PG
Sbjct: 377 PKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPG 436



 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 54/118 (45%), Positives = 61/118 (51%), Gaps = 17/118 (14%)

Query: 44  PGLPGP-----PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLR--------- 89
           PGLPGP     PG PGA G PGP G  G PG  G  G  G++G KG  G+          
Sbjct: 161 PGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPG 220

Query: 90  --GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
             G  GP GL G  G  G+ G  G  G  G+KGE GP G PGP+G+ G  G  G PGV
Sbjct: 221 QGGAPGPPGLPGPAG-LGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGV 277



 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 52/107 (48%), Positives = 58/107 (54%), Gaps = 11/107 (10%)

Query: 44  PGLPGP-----PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
           PGL GP     PG PG  G  GP G  GL G  G  G  GE GE+G  GL    GP GL 
Sbjct: 307 PGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGL---GGPPGL- 362

Query: 99  GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
              G  G  G++GP GP+GE G  GP G PG +GD+G  G  G PGV
Sbjct: 363 --PGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGV 407



 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 50/109 (45%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG--EKGTAGLRGKTGPLGLAGE 100
           +PG  GPPG PG  G PG  G  GL G  G  G  G  G    G  G +G  GP G  GE
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGE 189

Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
            G QGE G  G  G +G+ G VG  G PG  G  G  G PGLPG    G
Sbjct: 190 PGPQGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPGPAGLG 237



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 59  PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGE 118
           P   G +G P R+G    KG+  E     L     P+ L GE G  G+ G +GP GP G 
Sbjct: 46  PMQKGPVGPPFREG----KGQYLEMPLPLL-----PMDLKGEPGPPGKPGPRGPPGPPGF 96

Query: 119 KGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
            G+ G +G PG  G  G  G PG   + + G
Sbjct: 97  PGKPG-MGKPGLHGQPGPAGPPGFSRMGKAG 126


>gi|14149712 C1q and tumor necrosis factor related protein 5
           precursor [Homo sapiens]
          Length = 243

 Score =  149 bits (375), Expect = 4e-36
 Identities = 96/244 (39%), Positives = 122/244 (50%), Gaps = 41/244 (16%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PG PG P      G+PG HG  GLPGRDGRDGR G                 G  GEKG+
Sbjct: 29  PGHPGLP------GTPGHHGSQGLPGRDGRDGRDGAP---------------GAPGEKGE 67

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITT 163
            G  G  GP G  G +GE GP GP GP G+            C   S+  +SAFS   + 
Sbjct: 68  GGRPGLPGPRGDPGPRGEAGPAGPTGPAGE------------C---SVPPRSAFSAKRSE 112

Query: 164 SY--PEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNG 221
           S   P    P+ F++VL NE  HY+  TGKF C  PG+YYF+   T+    L   LV NG
Sbjct: 113 SRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNG 172

Query: 222 QYRIKTFDANTGNHDVA--SGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFL 279
           +     F    G    A  SG  ++ L+PED+VW+++   D  G+++     DS FSGFL
Sbjct: 173 ESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIK-TDSTFSGFL 231

Query: 280 LYVD 283
           +Y D
Sbjct: 232 VYSD 235


>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score =  146 bits (368), Expect = 2e-35
 Identities = 96/269 (35%), Positives = 130/269 (48%), Gaps = 31/269 (11%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-----LGL 97
           +PGL GP G PG  G  G  G  G+PG  G  G  G  G  G  G  G  GP     +G 
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK 534

Query: 98  AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRG-------EQGDP------GLPG 144
            G  G  G  GK G +GP+G+ G  GP GPPGP G           QG+       G+ G
Sbjct: 535 PGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594

Query: 145 VC-----------RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFI 193
           V              G      AF+  +T  +P    P+ FNK+L+N  ++YNP TG F 
Sbjct: 595 VKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFT 654

Query: 194 CAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-NTGNHDVASGSTVIYLQPEDEV 252
           C  PG+YYF+Y +     ++ + L  N +  + T+D    G  D ASGS V+ L+P D V
Sbjct: 655 CEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRV 714

Query: 253 WLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
           +L++      GL++   +  S FSG+LLY
Sbjct: 715 FLQMPSEQAAGLYAGQ-YVHSSFSGYLLY 742



 Score =  100 bits (249), Expect = 2e-21
 Identities = 54/115 (46%), Positives = 64/115 (55%), Gaps = 18/115 (15%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
           +PG+PGP GPPGA G PGP G  G+ G  G  G KGE G      L+G  G  G  GE G
Sbjct: 394 LPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG------LQGFPGKPGFLGEVG 447

Query: 103 DQGETGKKGPIGPEGEKGE------------VGPIGPPGPKGDRGEQGDPGLPGV 145
             G  G  GPIGP+GE G+            +GP G PG  GD+G QG PG+PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 52/106 (49%), Positives = 58/106 (54%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGL G PG PG  G  GP G  GLPG  G  G  G+KG  G  G+ G  GP G  G  GD
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGD 490

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           QG  G  G  G  G  G +GP G PGPKG+ G  G PG PG+ + G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 65/158 (41%), Positives = 75/158 (47%), Gaps = 42/158 (26%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEK 80
           GQP     KGE         +PGLPGPPG PG    G PGP G  G+ G  G  G +GEK
Sbjct: 325 GQPGFPGGKGEQ-------GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377

Query: 81  G------------EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGE------- 121
           G            E G  G+ G  GP G  G  G +GE G  GP GP G KGE       
Sbjct: 378 GPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFP 437

Query: 122 -----VGPIGPPG---------PKGDRGEQGDPGLPGV 145
                +G +GPPG         PKG+ G++G PGLPGV
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV 475



 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 58/127 (45%), Positives = 65/127 (51%), Gaps = 28/127 (22%)

Query: 43  IPGLPGPPGP---PGANGSPGPHGRIGL--------------PGRDGRDGRKGEKGEKGT 85
           + G PGP GP   PGA G PGP G IG+              PG+DG  G+ G  G KG 
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335

Query: 86  AGLRGKTGPLGL--------AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
            GL G  GP GL         G KGD+G  G  G +GP GEK   GPIG PG  G  GE 
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK---GPIGAPGIGGPPGEP 392

Query: 138 GDPGLPG 144
           G PG+PG
Sbjct: 393 GLPGIPG 399



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 11/113 (9%)

Query: 43  IPGLPGPPGP--------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP 94
           IPG+ G PGP        PG  G PG  G +G+PG  G  G+KGE G  G  G +G  GP
Sbjct: 142 IPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201

Query: 95  LGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
            GL   G+ G  G  G+ GP G  G KG  GP G  GPKGD+G  G PG PGV
Sbjct: 202 HGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGV 253



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 58/129 (44%), Positives = 65/129 (50%), Gaps = 23/129 (17%)

Query: 43  IPGLPGPPGP-----------PGANGSPGP---HGRIGLPGRDGRDGRKGEKG------- 81
           IPG  GPPGP           PG  G PGP    G  GLPG  G  G KG+KG       
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251

Query: 82  -EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
             KG  G+ G  GP+GL G  G  G TG  GP GP G+ G  G  GP GP G  G QG P
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310

Query: 141 GLPGVCRCG 149
           G+PG+ + G
Sbjct: 311 GIPGIGKPG 319



 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G  GP G PG  G PG  G  G+PG  G  G  G  G KG  G+ G  GP G  GE G Q
Sbjct: 375 GEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434

Query: 105 GETGKKG---PIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           G  GK G    +GP G +G  GPIGP G  G +G  G PG+PG+
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGL 478



 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 9/112 (8%)

Query: 43  IPGLPGPPGPPGANGSPGPHGR--IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
           +PG PG  GPPG +G PGP G   +G PG  G  G +G  G+ G  G  G  GP+G+ G 
Sbjct: 247 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV 306

Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQG---DPGLPGVCRCG 149
           +G  G  G    IG  G+ G  G  G PG KG++G  G    PGLPG+ + G
Sbjct: 307 QGPPGIPG----IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG 354



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 40  ICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
           + S+ G  GP G PG  G PGP G   LPG  G  G KG+ G +G  G+ GK G  G+ G
Sbjct: 113 LASLRGEQGPRGEPGPRGPPGPPG---LPGH-GIPGIKGKPGPQGYPGV-GKPGMPGMPG 167

Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           + G  G  G KG IG +      G IGP G  G +G  G  GLPG+ + G
Sbjct: 168 KPGAMGMPGAKGEIGQK------GEIGPMGIPGPQGPPGPHGLPGIGKPG 211



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 37/110 (33%)

Query: 70  RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK--------KGPIGPE----- 116
           R G++    +  E   A LRG+ GP G  G +G  G  G         KG  GP+     
Sbjct: 98  RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157

Query: 117 ------------------------GEKGEVGPIGPPGPKGDRGEQGDPGL 142
                                   G+KGE+GP+G PGP+G  G  G PG+
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 89  RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL--PGV 145
           +GK  PL  A  +G+QG  G+ GP GP G  G  G  G PG KG  G QG PG+  PG+
Sbjct: 107 KGKEIPL--ASLRGEQGPRGEPGPRGPPGPPGLPGH-GIPGIKGKPGPQGYPGVGKPGM 162


>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score =  146 bits (368), Expect = 2e-35
 Identities = 96/269 (35%), Positives = 130/269 (48%), Gaps = 31/269 (11%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-----LGL 97
           +PGL GP G PG  G  G  G  G+PG  G  G  G  G  G  G  G  GP     +G 
Sbjct: 475 VPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGK 534

Query: 98  AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRG-------EQGDP------GLPG 144
            G  G  G  GK G +GP+G+ G  GP GPPGP G           QG+       G+ G
Sbjct: 535 PGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594

Query: 145 VC-----------RCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFI 193
           V              G      AF+  +T  +P    P+ FNK+L+N  ++YNP TG F 
Sbjct: 595 VKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFT 654

Query: 194 CAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDA-NTGNHDVASGSTVIYLQPEDEV 252
           C  PG+YYF+Y +     ++ + L  N +  + T+D    G  D ASGS V+ L+P D V
Sbjct: 655 CEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRV 714

Query: 253 WLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
           +L++      GL++   +  S FSG+LLY
Sbjct: 715 FLQMPSEQAAGLYAGQ-YVHSSFSGYLLY 742



 Score =  100 bits (249), Expect = 2e-21
 Identities = 54/115 (46%), Positives = 64/115 (55%), Gaps = 18/115 (15%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
           +PG+PGP GPPGA G PGP G  G+ G  G  G KGE G      L+G  G  G  GE G
Sbjct: 394 LPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPG------LQGFPGKPGFLGEVG 447

Query: 103 DQGETGKKGPIGPEGEKGE------------VGPIGPPGPKGDRGEQGDPGLPGV 145
             G  G  GPIGP+GE G+            +GP G PG  GD+G QG PG+PG+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGI 502



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 52/106 (49%), Positives = 58/106 (54%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGL G PG PG  G  GP G  GLPG  G  G  G+KG  G  G+ G  GP G  G  GD
Sbjct: 431 PGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGD 490

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           QG  G  G  G  G  G +GP G PGPKG+ G  G PG PG+ + G
Sbjct: 491 QGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPG 536



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 65/158 (41%), Positives = 75/158 (47%), Gaps = 42/158 (26%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGAN--GSPGPHGRIGLPGRDGRDGRKGEK 80
           GQP     KGE         +PGLPGPPG PG    G PGP G  G+ G  G  G +GEK
Sbjct: 325 GQPGFPGGKGEQ-------GLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377

Query: 81  G------------EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGE------- 121
           G            E G  G+ G  GP G  G  G +GE G  GP GP G KGE       
Sbjct: 378 GPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFP 437

Query: 122 -----VGPIGPPG---------PKGDRGEQGDPGLPGV 145
                +G +GPPG         PKG+ G++G PGLPGV
Sbjct: 438 GKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGV 475



 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 58/127 (45%), Positives = 65/127 (51%), Gaps = 28/127 (22%)

Query: 43  IPGLPGPPGP---PGANGSPGPHGRIGL--------------PGRDGRDGRKGEKGEKGT 85
           + G PGP GP   PGA G PGP G IG+              PG+DG  G+ G  G KG 
Sbjct: 276 VTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGE 335

Query: 86  AGLRGKTGPLGL--------AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ 137
            GL G  GP GL         G KGD+G  G  G +GP GEK   GPIG PG  G  GE 
Sbjct: 336 QGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALGPRGEK---GPIGAPGIGGPPGEP 392

Query: 138 GDPGLPG 144
           G PG+PG
Sbjct: 393 GLPGIPG 399



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 11/113 (9%)

Query: 43  IPGLPGPPGP--------PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP 94
           IPG+ G PGP        PG  G PG  G +G+PG  G  G+KGE G  G  G +G  GP
Sbjct: 142 IPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGP 201

Query: 95  LGL--AGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
            GL   G+ G  G  G+ GP G  G KG  GP G  GPKGD+G  G PG PGV
Sbjct: 202 HGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGV 253



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 58/129 (44%), Positives = 65/129 (50%), Gaps = 23/129 (17%)

Query: 43  IPGLPGPPGP-----------PGANGSPGP---HGRIGLPGRDGRDGRKGEKG------- 81
           IPG  GPPGP           PG  G PGP    G  GLPG  G  G KG+KG       
Sbjct: 192 IPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP 251

Query: 82  -EKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
             KG  G+ G  GP+GL G  G  G TG  GP GP G+ G  G  GP GP G  G QG P
Sbjct: 252 GVKGPPGMHGPPGPVGLPGV-GKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPP 310

Query: 141 GLPGVCRCG 149
           G+PG+ + G
Sbjct: 311 GIPGIGKPG 319



 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G  GP G PG  G PG  G  G+PG  G  G  G  G KG  G+ G  GP G  GE G Q
Sbjct: 375 GEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQ 434

Query: 105 GETGKKG---PIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           G  GK G    +GP G +G  GPIGP G  G +G  G PG+PG+
Sbjct: 435 GFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGL 478



 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 9/112 (8%)

Query: 43  IPGLPGPPGPPGANGSPGPHGR--IGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
           +PG PG  GPPG +G PGP G   +G PG  G  G +G  G+ G  G  G  GP+G+ G 
Sbjct: 247 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV 306

Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQG---DPGLPGVCRCG 149
           +G  G  G    IG  G+ G  G  G PG KG++G  G    PGLPG+ + G
Sbjct: 307 QGPPGIPG----IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG 354



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 40  ICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAG 99
           + S+ G  GP G PG  G PGP G   LPG  G  G KG+ G +G  G+ GK G  G+ G
Sbjct: 113 LASLRGEQGPRGEPGPRGPPGPPG---LPGH-GIPGIKGKPGPQGYPGV-GKPGMPGMPG 167

Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           + G  G  G KG IG +      G IGP G  G +G  G  GLPG+ + G
Sbjct: 168 KPGAMGMPGAKGEIGQK------GEIGPMGIPGPQGPPGPHGLPGIGKPG 211



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 37/110 (33%)

Query: 70  RDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGK--------KGPIGPE----- 116
           R G++    +  E   A LRG+ GP G  G +G  G  G         KG  GP+     
Sbjct: 98  RMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV 157

Query: 117 ------------------------GEKGEVGPIGPPGPKGDRGEQGDPGL 142
                                   G+KGE+GP+G PGP+G  G  G PG+
Sbjct: 158 GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGI 207



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 89  RGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL--PGV 145
           +GK  PL  A  +G+QG  G+ GP GP G  G  G  G PG KG  G QG PG+  PG+
Sbjct: 107 KGKEIPL--ASLRGEQGPRGEPGPRGPPGPPGLPGH-GIPGIKGKPGPQGYPGVGKPGM 162


>gi|87298828 complement component 1, q subcomponent, B chain
           precursor [Homo sapiens]
          Length = 253

 Score =  137 bits (345), Expect = 1e-32
 Identities = 92/242 (38%), Positives = 122/242 (50%), Gaps = 26/242 (10%)

Query: 48  GPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGET 107
           GPP  PG  G PG       PG DG+ G  G KGEKG  GL G  G  G  G+ G  G  
Sbjct: 33  GPPAIPGIPGIPGT------PGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNP 86

Query: 108 GKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPE 167
           GK GP GP G KG  G  G PGPKG+ G+                 K AFS   T + P 
Sbjct: 87  GKVGPKGPMGPKGGPGAPGAPGPKGESGDY------------KATQKIAFSATRTINVPL 134

Query: 168 ER-LPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQ--YR 224
            R   I F+ V+ N   +Y P +GKF C  PG+YYF+Y  + +  +L + L+   +   +
Sbjct: 135 RRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHAS-SRGNLCVNLMRGRERAQK 193

Query: 225 IKTF-DANTGNHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
           + TF D       V +G  V+ L+  + V+L+   TD+N L    G A+S+FSGFLL+ D
Sbjct: 194 VVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQA--TDKNSLLGMEG-ANSIFSGFLLFPD 250

Query: 284 TD 285
            +
Sbjct: 251 ME 252


>gi|56786155 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score =  133 bits (335), Expect = 2e-31
 Identities = 89/232 (38%), Positives = 116/232 (50%), Gaps = 19/232 (8%)

Query: 54  GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPI 113
           G  G PG  G  G PG+DG DG  G KGE G   + G  GP G  GE G  G  GK GP+
Sbjct: 31  GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90

Query: 114 GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPII 173
           GP G  G  GP+G PG  G+ G                  +S F+V   T  P     +I
Sbjct: 91  GPPGMPGVPGPMGIPGEPGEEGRYKQK------------FQSVFTVTRQTHQPPAPNSLI 138

Query: 174 -FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT 232
            FN VL N    Y+ +TGKF C  PG+YYF Y  +    +L + L  +G  ++ TF  +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196

Query: 233 G-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
              + V SG  ++ LQ  +EVWL +   D   +    G +DS+FSGFLL+ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAV--NDYYDMVGIQG-SDSVFSGFLLFPD 245



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 31  KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           KG+   P     +PG PG  GP G  G PG  G +G+PG  G +GR  +K
Sbjct: 72  KGQKGEP----GLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117


>gi|166235903 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score =  133 bits (335), Expect = 2e-31
 Identities = 89/232 (38%), Positives = 116/232 (50%), Gaps = 19/232 (8%)

Query: 54  GANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPI 113
           G  G PG  G  G PG+DG DG  G KGE G   + G  GP G  GE G  G  GK GP+
Sbjct: 31  GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPM 90

Query: 114 GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPII 173
           GP G  G  GP+G PG  G+ G                  +S F+V   T  P     +I
Sbjct: 91  GPPGMPGVPGPMGIPGEPGEEGRYKQK------------FQSVFTVTRQTHQPPAPNSLI 138

Query: 174 -FNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTFDANT 232
            FN VL N    Y+ +TGKF C  PG+YYF Y  +    +L + L  +G  ++ TF  +T
Sbjct: 139 RFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS-HTANLCVLLYRSG-VKVVTFCGHT 196

Query: 233 G-NHDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
              + V SG  ++ LQ  +EVWL +   D   +    G +DS+FSGFLL+ D
Sbjct: 197 SKTNQVNSGGVLLRLQVGEEVWLAV--NDYYDMVGIQG-SDSVFSGFLLFPD 245



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 31  KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           KG+   P     +PG PG  GP G  G PG  G +G+PG  G +GR  +K
Sbjct: 72  KGQKGEP----GLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQK 117


>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
           sapiens]
          Length = 255

 Score =  128 bits (321), Expect = 7e-30
 Identities = 80/205 (39%), Positives = 109/205 (53%), Gaps = 20/205 (9%)

Query: 94  PLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQ---GDPGLPGVCRCGS 150
           P  + G KG+ G  GK GP GP GE G  GP+GPPG KG+ G Q   G PG PG+   G+
Sbjct: 56  PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGA 115

Query: 151 I-------VLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFS 203
           I       V K AF  G+   + E    + F+ V+ N G HY+P TGKF C+ PGIY+F+
Sbjct: 116 ISAATYSTVPKIAFYAGLKRQH-EGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFT 174

Query: 204 YDITLA---NKHLAIGLVHNGQYRIKTF--DANTGNHDVASGSTVIYLQPEDEVWLEIFF 258
           Y + +       +   L  N Q R      DA+  N+D AS S V++L+P DEV++++  
Sbjct: 175 YHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQ-NYDYASNSVVLHLEPGDEVYIKL-- 231

Query: 259 TDQNGLFSDPGWADSLFSGFLLYVD 283
            D            S FSGF++Y D
Sbjct: 232 -DGGKAHGGNNNKYSTFSGFIIYAD 255



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/44 (50%), Positives = 24/44 (54%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGL 88
           G PG  GP G  G PGP G +G PG  G  GR+G  G  G  GL
Sbjct: 67  GRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGL 110



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 21/48 (43%), Positives = 23/48 (47%)

Query: 25  PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDG 72
           P+G   +     PR     PG PGP GPPG  G PG  G  G PG  G
Sbjct: 62  PKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPG 109



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/48 (41%), Positives = 21/48 (43%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 92
           G  GPPG PG  G  GP G  G PGR G  G  G  G      +   T
Sbjct: 73  GPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAAT 120


>gi|7705753 complement component 1, q subcomponent, A chain
           precursor [Homo sapiens]
          Length = 245

 Score =  125 bits (314), Expect = 4e-29
 Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 60  GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEK 119
           G  G  G PGR GR G KGE+GE G  G+R      G+ G KGDQGE    GP G  G+ 
Sbjct: 31  GKKGEAGRPGRRGRPGLKGEQGEPGAPGIR-----TGIQGLKGDQGE---PGPSGNPGKV 82

Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLF 179
           G  GP GP G +G  G +G  G PG  +      + AFS  I  + P     +IF+ V+ 
Sbjct: 83  GYPGPSGPLGARGIPGIKGTKGSPGNIKDQP---RPAFS-AIRRNPPMGGNVVIFDTVIT 138

Query: 180 NEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIKTF-----DANTGN 234
           N+ E Y   +G+F+C  PG YYF++ + L+   + + +V + + +++         N G 
Sbjct: 139 NQEEPYQNHSGRFVCTVPGYYYFTFQV-LSQWEICLSIVSSSRGQVRRSLGFCDTTNKGL 197

Query: 235 HDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLY 281
             V SG  V+ LQ  D+VW+E     + G       ADS+FSGFL++
Sbjct: 198 FQVVSGGMVLQLQQGDQVWVE--KDPKKGHIYQGSEADSVFSGFLIF 242



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
           G+P     +GE  +P     I GL G  G PG +G+P   G++G PG  G  G +G  G 
Sbjct: 43  GRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNP---GKVGYPGPSGPLGARGIPGI 99

Query: 83  KGTAGLRG 90
           KGT G  G
Sbjct: 100 KGTKGSPG 107


>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
           sapiens]
          Length = 258

 Score =  123 bits (309), Expect = 2e-28
 Identities = 94/289 (32%), Positives = 136/289 (47%), Gaps = 44/289 (15%)

Query: 8   MFVLLYVTSFAICASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGL 67
           M ++L V    + +SG P G+      Y     C +   P P   PGA            
Sbjct: 1   MLLVLVVLIPVLVSSGGPEGH------YEMLGTCRMVCDPYPARGPGAGART-------- 46

Query: 68  PGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP 127
              DG D    + G    + L        + G +G  G TGK GP GP G+ G  GP+GP
Sbjct: 47  ---DGGDALSEQSGAPPPSTL--------VQGPQGKPGRTGKPGPPGPPGDPGPPGPVGP 95

Query: 128 PGPKGDRGEQGDPGLPGVCRCGSI-------VLKSAFSVGITTSYPEERLPII-FNKVLF 179
           PG KG+ G+ G PGLPG    G+I       V + AF  G+    P E   ++ F+ V+ 
Sbjct: 96  PGEKGEPGKPGPPGLPGAGGSGAISTATYTTVPRVAFYAGLKN--PHEGYEVLKFDDVVT 153

Query: 180 NEGEHYNPATGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTF--DANTGN 234
           N G +Y+ A+GKF C  PG Y+F+Y + +       +   L  NGQ R      DA+  N
Sbjct: 154 NLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQ-N 212

Query: 235 HDVASGSTVIYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
           +D AS S +++L   DEV++++     +G  S+     S FSGF++Y D
Sbjct: 213 YDYASNSVILHLDAGDEVFIKLDGGKAHGGNSN---KYSTFSGFIIYSD 258


>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
          Length = 686

 Score =  116 bits (290), Expect = 3e-26
 Identities = 64/149 (42%), Positives = 77/149 (51%), Gaps = 23/149 (15%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           +G P      GE  +P     +PGLPGP   PGPPG  G PGP G  GL G  G  G +G
Sbjct: 528 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 585

Query: 79  EKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEKG 120
           EKG++G  GL G  GP+G+ G  G +GE G K                  GP G +G +G
Sbjct: 586 EKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRG 645

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           E G  G  GPKGD+G+QG PGL   C  G
Sbjct: 646 ERGKKGSRGPKGDKGDQGAPGLDAPCPLG 674



 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 447 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 506

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  +PG+
Sbjct: 507 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 550



 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 17/119 (14%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
           + G  G PG PG  G  G  G+ G PG  G  G KG            +G  G  GL+G 
Sbjct: 506 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 565

Query: 92  TGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            GP G A      GEKG QGE G +GP+G  G  G +G  GP GPKG+RG +GDPG+ G
Sbjct: 566 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 624



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 248 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 307

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 308 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 367

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 368 PGPPGLPG 375



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 360 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 419

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 420 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 475



 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 34/136 (25%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLA 230

Query: 88  ------------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPG 129
                             ++G  GP G  G  G  G  G  GP+GP G  G  GP G PG
Sbjct: 231 PPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPG 290

Query: 130 PKGDRGEQGDPGLPGV 145
            +G  G +G+ G+PG+
Sbjct: 291 IQGYHGRKGERGMPGM 306



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 358 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 413

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 414 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 473

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 474 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 520



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 319 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 378

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 379 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 438

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 439 RTLALMGPPGLPGQIGPPGAPGI 461



 Score = 82.0 bits (201), Expect = 6e-16
 Identities = 57/158 (36%), Positives = 64/158 (40%), Gaps = 57/158 (36%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGE------KGDQGETGKKGPIGPEGEKGE------------------------- 121
           GP+GL G+      KGD G TG  G  GP+G+KGE                         
Sbjct: 175 GPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPV 234

Query: 122 ---------------VGPIGPPGPKGDRGEQGDPGLPG 144
                           GP GPPGP G  G  G PGLPG
Sbjct: 235 IKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 272



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 46/104 (44%), Positives = 51/104 (49%), Gaps = 7/104 (6%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGEKGEVGP---IGPPGPKGDRGEQGDPGLPGVC 146
             G  GPIG +G+ G  GP   +G  GP G  G QG  G  G C
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQC 213


>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
          Length = 705

 Score =  116 bits (290), Expect = 3e-26
 Identities = 64/149 (42%), Positives = 77/149 (51%), Gaps = 23/149 (15%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           +G P      GE  +P     +PGLPGP   PGPPG  G PGP G  GL G  G  G +G
Sbjct: 547 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 604

Query: 79  EKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEKG 120
           EKG++G  GL G  GP+G+ G  G +GE G K                  GP G +G +G
Sbjct: 605 EKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRG 664

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           E G  G  GPKGD+G+QG PGL   C  G
Sbjct: 665 ERGKKGSRGPKGDKGDQGAPGLDAPCPLG 693



 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  +PG+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 569



 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 17/119 (14%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
           + G  G PG PG  G  G  G+ G PG  G  G KG            +G  G  GL+G 
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 584

Query: 92  TGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            GP G A      GEKG QGE G +GP+G  G  G +G  GP GPKG+RG +GDPG+ G
Sbjct: 585 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 643



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 387 PGPPGLPG 394



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
                                                ++G  GP G  G  G  G  G  
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290

Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           GP+GL          GK G  GP+G+ G  GP G PGP+G +GE+G  G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  GPIG +G+      KG++G  GPPG  G +G++G+ G  G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  GPPG PG  G PG  G IGL      DG+ G  G KG  GL G  G  G  G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207

Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
           G++G+ G                       K  P+                  G + +  
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
             GP GPPGP G  G  G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291


>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
          Length = 668

 Score =  115 bits (287), Expect = 6e-26
 Identities = 65/150 (43%), Positives = 77/150 (51%), Gaps = 22/150 (14%)

Query: 22  SGQPRGNQLKGENYSPRYICS-IPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRK 77
           +G P     KGE        S +PGLPGP   PGPPG  G PGP G  GL G  G  G +
Sbjct: 507 NGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 566

Query: 78  GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEK 119
           GEKG++G  GL G  GP+G+ G  G +GE G K                  GP G +G +
Sbjct: 567 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 626

Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           GE G  G  GPKGD+G+QG PGL   C  G
Sbjct: 627 GERGKKGSRGPKGDKGDQGAPGLDAPCPLG 656



 Score =  104 bits (260), Expect = 8e-23
 Identities = 55/104 (52%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 444 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 503

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGP--KGDRGEQGDPGLPGV 145
           +GE G  G  G +GEKGE G  G P P   G  G  G PGL GV
Sbjct: 504 KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGV 547



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIG--LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
           + G  G PG PG  G  G  G+ G  +PG  G +G  G  G +G  G +G+ G  G  GE
Sbjct: 503 VKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGE 562

Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           KG QGE G +GP+G  G  G +G  GP GPKG+RG +GDPG+ G
Sbjct: 563 KGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 606



 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 67/153 (43%), Positives = 75/153 (49%), Gaps = 29/153 (18%)

Query: 20  CASGQP---RGNQ---LKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
           C S  P   R +Q   LKGE  S   I   PG PGPPGP G  G PG  G +G PG  G 
Sbjct: 221 CLSSMPAALRSSQIIALKGEQ-SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP 279

Query: 74  DGRKGE---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEK 119
            G KG+         KGE+G  G+ GK G  G     +AG KG+ G  G KG  G EG  
Sbjct: 280 PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSP 339

Query: 120 GEVGPIGPPGPKGD--------RGEQGDPGLPG 144
           G  G +G  G KGD        RGE G PGLPG
Sbjct: 340 GLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPG 372



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 357 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 416

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 417 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 472



 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 49/133 (36%), Positives = 61/133 (45%), Gaps = 31/133 (23%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  ---------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
                          ++G  GP G  G  G  G  G  GP+GP G  G  GP G PG +G
Sbjct: 231 SSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 290

Query: 133 DRGEQGDPGLPGV 145
             G +G+ G+PG+
Sbjct: 291 YHGRKGERGMPGM 303



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 355 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 410

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 411 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 470

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 471 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 517



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 316 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 375

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 376 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 435

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 436 RTLALMGPPGLPGQIGPPGAPGI 458



 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 57/155 (36%), Positives = 64/155 (41%), Gaps = 54/155 (34%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGE------KGDQGETGKKGPIGPEGEKGE------------------------- 121
           GP+GL G+      KGD G TG  G  GP+G+KGE                         
Sbjct: 175 GPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQI 234

Query: 122 ------------VGPIGPPGPKGDRGEQGDPGLPG 144
                        GP GPPGP G  G  G PGLPG
Sbjct: 235 IALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 269



 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 46/99 (46%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  GPIG +G+ G       PGPKGD G  G PG PG
Sbjct: 170 FPGFPGPIGLDGKPGH------PGPKGDMGLTGPPGQPG 202


>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
          Length = 690

 Score =  115 bits (287), Expect = 6e-26
 Identities = 65/150 (43%), Positives = 77/150 (51%), Gaps = 22/150 (14%)

Query: 22  SGQPRGNQLKGENYSPRYICS-IPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRK 77
           +G P     KGE        S +PGLPGP   PGPPG  G PGP G  GL G  G  G +
Sbjct: 529 NGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 588

Query: 78  GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKK------------------GPIGPEGEK 119
           GEKG++G  GL G  GP+G+ G  G +GE G K                  GP G +G +
Sbjct: 589 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 648

Query: 120 GEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
           GE G  G  GPKGD+G+QG PGL   C  G
Sbjct: 649 GERGKKGSRGPKGDKGDQGAPGLDAPCPLG 678



 Score =  104 bits (260), Expect = 8e-23
 Identities = 55/104 (52%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGP--KGDRGEQGDPGLPGV 145
           +GE G  G  G +GEKGE G  G P P   G  G  G PGL GV
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGV 569



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIG--LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE 100
           + G  G PG PG  G  G  G+ G  +PG  G +G  G  G +G  G +G+ G  G  GE
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGE 584

Query: 101 KGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           KG QGE G +GP+G  G  G +G  GP GPKG+RG +GDPG+ G
Sbjct: 585 KGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTG 628



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 387 PGPPGLPG 394



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
                                                ++G  GP G  G  G  G  G  
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290

Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           GP+GL          GK G  GP+G+ G  GP G PGP+G +GE+G  G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  GPIG +G+      KG++G  GPPG  G +G++G+ G  G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  GPPG PG  G PG  G IGL      DG+ G  G KG  GL G  G  G  G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207

Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
           G++G+ G                       K  P+                  G + +  
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
             GP GPPGP G  G  G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291


>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
           sapiens]
          Length = 287

 Score =  114 bits (284), Expect = 1e-25
 Identities = 98/280 (35%), Positives = 120/280 (42%), Gaps = 56/280 (20%)

Query: 38  RYICSIPGLPGPPG-PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
           R IC  P    P G PPGA   P       L               +    L     P  
Sbjct: 30  RMICD-PYTAAPGGEPPGAKAQPPGPSTAAL---------------EVMQDLSANPPPPF 73

Query: 97  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP---------GVCR 147
           + G KGD G  GK GP GP GE G  GP GPPG KGD G  G PGL          GV  
Sbjct: 74  IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133

Query: 148 CGSIV------------------LKSAFSVGITTSYPEERLPII-FNKVLFNEGEHYNPA 188
            G+ V                   K AF VG+ +  P E   ++ F+ V+ N G HY+P 
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS--PHEGYEVLKFDDVVTNLGNHYDPT 191

Query: 189 TGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTF--DANTGNHDVASGSTV 243
           TGKF C   GIY+F+Y I +       +   L  NGQ R      DA+  N+D AS S V
Sbjct: 192 TGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ-NYDYASNSVV 250

Query: 244 IYLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
           ++L   DEV++++   D            S FSGFLLY D
Sbjct: 251 LHLDSGDEVYVKL---DGGKAHGGNNNKYSTFSGFLLYPD 287


>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
          Length = 691

 Score =  114 bits (284), Expect = 1e-25
 Identities = 55/102 (53%), Positives = 63/102 (61%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  G+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGL 567



 Score =  106 bits (264), Expect = 3e-23
 Identities = 57/121 (47%), Positives = 65/121 (53%), Gaps = 21/121 (17%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRK---------------GEKGEKGTAGLR 89
           G PGP GPPG +G PG  G  G PG  G  G K               GEKG  G  GL+
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568

Query: 90  GKTGPLGLA------GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP 143
           G  GP G A      GEKG QGE G +GP+G  G  G +G  GP GPKG+RG +GDPG+ 
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMT 628

Query: 144 G 144
           G
Sbjct: 629 G 629



 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 52/123 (42%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA------ 98
           G  G PG  G  G PGP G  GL G  G  G +GEKG++G  GL G  GP+G+       
Sbjct: 557 GEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPK 616

Query: 99  GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 146
           GE+G +G+ G  GP             G +G +GE G  G  GPKGD+G+QG PGL   C
Sbjct: 617 GERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 676

Query: 147 RCG 149
             G
Sbjct: 677 PLG 679



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 387 PGPPGLPG 394



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
                                                ++G  GP G  G  G  G  G  
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290

Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           GP+GL          GK G  GP+G+ G  GP G PGP+G +GE+G  G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  GPIG +G+      KG++G  GPPG  G +G++G+ G  G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  GPPG PG  G PG  G IGL      DG+ G  G KG  GL G  G  G  G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207

Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
           G++G+ G                       K  P+                  G + +  
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
             GP GPPGP G  G  G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291


>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
          Length = 703

 Score =  114 bits (284), Expect = 1e-25
 Identities = 55/102 (53%), Positives = 63/102 (61%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  G+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGL 567



 Score =  100 bits (248), Expect = 2e-21
 Identities = 59/125 (47%), Positives = 67/125 (53%), Gaps = 24/125 (19%)

Query: 44  PGLPGPPGPPGANG---SPGPHGRIGLPGRDGRDGRKGEKGEK---GTAGLRGKTGPLGL 97
           PG  GPPG  G NG   SPG  G  G  G+ G  G KGE GEK   G  GL+G  GP G 
Sbjct: 517 PGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGE 576

Query: 98  A------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGDRGEQGD 139
           A      GEKG QGE G +GP+            GP G  G +G  GP GPKG+RG +GD
Sbjct: 577 AGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGD 636

Query: 140 PGLPG 144
           PG+ G
Sbjct: 637 PGMTG 641



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 54/109 (49%), Positives = 60/109 (55%), Gaps = 9/109 (8%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKG------EKGTAGLRGKTGPLGLA 98
           G PGP GPPG +G PG  G  G PG  G  G KGE G      EKG AG +G  G  GL 
Sbjct: 509 GPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQ 568

Query: 99  GEKGDQGETG---KKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  G +GE G    KG  G +GEKG+ GP+G PG  G  G  G PG PG
Sbjct: 569 GVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPG 617



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 49/100 (49%), Positives = 59/100 (59%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G PG  GPPG  G PG  G  G+ G +G  G  GEKGEKG  G  G  G  G AGEKG+ 
Sbjct: 503 GKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNP 562

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  G +G  GP+GE G  G  G  G +G++G++G  GLPG
Sbjct: 563 GAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPG 602



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 387 PGPPGLPG 394



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494



 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 54/135 (40%), Positives = 62/135 (45%), Gaps = 30/135 (22%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G  G PG  G  G PGP G  GL G  G  G +GEKG++G  GL G +G  G  G  G  
Sbjct: 557 GEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTP 616

Query: 105 GETGKKGPIGPEGEKGE------VGPI---------GPP---------------GPKGDR 134
           G  G  GP GP+GE+G        GP          GPP               GPKGD+
Sbjct: 617 GPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK 676

Query: 135 GEQGDPGLPGVCRCG 149
           G+QG PGL   C  G
Sbjct: 677 GDQGAPGLDAPCPLG 691



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
                                                ++G  GP G  G  G  G  G  
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290

Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 20/109 (18%)

Query: 44  PGLPGPP---GPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           PG   PP   GP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 115 PGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           GP+GL          GK G  GP+G+ G  GP G PGP+G +GE+G  G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 49  PPGPPGANGSP---GPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           P   PG N  P   GP GR GLPG  G  G  G  G  G AGL    GP G  G+ G +G
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGTRG 169

Query: 106 ETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  GPIG +G+      KG++G  GPPG  G +G++G+ G  G
Sbjct: 170 FPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  GPPG PG  G PG  G IGL      DG+ G  G KG  GL G  G  G  G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207

Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
           G++G+ G                       K  P+                  G + +  
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
             GP GPPGP G  G  G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score =  112 bits (281), Expect = 3e-25
 Identities = 58/113 (51%), Positives = 67/113 (59%), Gaps = 12/113 (10%)

Query: 45   GLPGPPGPPGANGSPGPHGRIGLPG------RDGRDGRKGEKGEKGTAG------LRGKT 92
            G PGP GPPG  G PG  GR G PG      RDG  G KG++GE G AG        G  
Sbjct: 995  GPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAP 1054

Query: 93   GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
            GP+G AG+ GD+GETG  GP GP G  G  GP GP GP+GD+GE G+ G  G+
Sbjct: 1055 GPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGI 1107



 Score =  105 bits (263), Expect = 4e-23
 Identities = 51/102 (50%), Positives = 59/102 (57%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKG 102
           + G PG PGP G  G PGP G+ G PG  G  G +G+ G  G  G +G  G  G AGE+G
Sbjct: 540 LTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERG 599

Query: 103 DQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G  G  GP G +GE G  GP GP GP G+RGEQG  G PG
Sbjct: 600 VPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPG 641



 Score =  105 bits (262), Expect = 5e-23
 Identities = 54/120 (45%), Positives = 63/120 (52%)

Query: 25  PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
           P G Q  G    P+     PG PG  G  GA G PGP G  G PG  G +G++G +GE G
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476

Query: 85  TAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             GL G  G  G  G +G  G  G  GP GP GE+G  GP GP G  G+ G  G+ GLPG
Sbjct: 477 PTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPG 536



 Score =  102 bits (255), Expect = 3e-22
 Identities = 61/133 (45%), Positives = 69/133 (51%), Gaps = 13/133 (9%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPG---PPGPPGANGSPGPHGRIGLPGRDGRDGRK 77
           A GQP     KG N +P  I   PG PG   P GP G  G PGP G  G PG  G  G  
Sbjct: 390 ADGQPGA---KGANGAPG-IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445

Query: 78  GEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPP------GPK 131
           G KGE G  G++G  GP G  G++G +GE G  G  GP GE+G  G  G P      GPK
Sbjct: 446 GAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPK 505

Query: 132 GDRGEQGDPGLPG 144
           G  GE+G PG  G
Sbjct: 506 GPAGERGSPGPAG 518



 Score =  100 bits (250), Expect = 1e-21
 Identities = 50/101 (49%), Positives = 56/101 (55%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G+ GP GP G  GSPGP G  G PG  GR G  G  G KG  G  G  GP G  G  G  
Sbjct: 500 GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 559

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           G+ G+ GP GP G +G+ G +G PGPKG  GE G  G  GV
Sbjct: 560 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV 600



 Score =  100 bits (250), Expect = 1e-21
 Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           A+G P  +  KG+          PG PG  G PG  G PG  G  GLPG  G  G  G K
Sbjct: 699 ANGAPGNDGAKGD-------AGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPK 751

Query: 81  GEKGTA---GLRGKTGPL---GLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDR 134
           G  G+    G+RG TGP+   G AG  GD+GE+G  GP GP G +G  G  G PGP G  
Sbjct: 752 GADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPA 811

Query: 135 GEQGDPGLPG 144
           G  G PG  G
Sbjct: 812 GFAGPPGADG 821



 Score =  100 bits (250), Expect = 1e-21
 Identities = 50/100 (50%), Positives = 57/100 (57%), Gaps = 3/100 (3%)

Query: 45   GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
            G PGPPGP G  GSPG  G  G P   G  G +G  G++G  GL G+ G  G  G  G  
Sbjct: 923  GPPGPPGPAGEKGSPGADGPAGAP---GTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPS 979

Query: 105  GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            GE GK+GP G  GE+G  GP+GPPG  G  GE G  G PG
Sbjct: 980  GEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019



 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/140 (45%), Positives = 70/140 (50%), Gaps = 19/140 (13%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIG------LPGRDGRDGR 76
           G P  +  +GE   P     + G PGP GP GANG+PG  G  G       PG  G  G 
Sbjct: 668 GAPGPSGARGERGFPGER-GVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGL 726

Query: 77  KGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKG------PIGPEG------EKGEVGP 124
           +G  GE+G AGL G  G  G AG KG  G  GK G      PIGP G      +KGE GP
Sbjct: 727 QGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGP 786

Query: 125 IGPPGPKGDRGEQGDPGLPG 144
            GP GP G RG  GD G PG
Sbjct: 787 SGPAGPTGARGAPGDRGEPG 806



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 51/103 (49%), Positives = 56/103 (54%), Gaps = 6/103 (5%)

Query: 45  GLPGPPGPPGANGS------PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
           G PGPPGPPGA G       PGP G  G PG+ G  G  G  G  G AG  G+ G  G  
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP 622

Query: 99  GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           G  G  GE G++GP G  G +G  GP GPPG  G  GEQG PG
Sbjct: 623 GPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG 665



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 49/100 (49%), Positives = 52/100 (52%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G  G PG PG  G PGP G  GLPG  G  G KG +G  G  G +G  GP G  GE G  
Sbjct: 233 GEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSP 292

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           GE G  G +GP G  GE G  G PGP G RG  G  G  G
Sbjct: 293 GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAG 332



 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 49/100 (49%), Positives = 57/100 (57%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G  GPPGPPG NG  G  G+ G PG  G  G +G +G  GTAGL G  G  G +G  G +
Sbjct: 218 GPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAK 277

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G+ G  GP G  G  GE G  G  GP+G  GE+G PG PG
Sbjct: 278 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPG 317



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 48/100 (48%), Positives = 57/100 (57%)

Query: 45   GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
            G  GP GPPGA G+PG  G +G  G+ G  G  G  G  G  G  G  GP G  G +GD+
Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDK 1096

Query: 105  GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            GETG++G  G +G +G  G  GPPGP G  GEQG  G  G
Sbjct: 1097 GETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG 1136



 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 59/138 (42%), Positives = 70/138 (50%), Gaps = 19/138 (13%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR---DGRKG 78
           +G P    L G   SP       G  GPPGP G +G PGP G  G  G+ G     G KG
Sbjct: 532 AGLPGAKGLTGSPGSP----GPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKG 587

Query: 79  EKGEKGTAGLRGKTGP---LGLAGEKGDQGETGKKGPIGPEGEKGEVGPI---------G 126
             GE G AG RG  GP   +G AG+ G+ G  G  GP GP GE+GE GP          G
Sbjct: 588 AAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPG 647

Query: 127 PPGPKGDRGEQGDPGLPG 144
           P GP G+ G+ G+ G+PG
Sbjct: 648 PAGPPGEAGKPGEQGVPG 665



 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 47/100 (47%), Positives = 53/100 (53%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G PGPPGP G  G PG  G+ G  G  G  G KG+ G  G AG  G  GP+G  G  G +
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAK 862

Query: 105 GETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  G  GP G  G  G  G +GPPGP G+ G  G PG  G
Sbjct: 863 GARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAG 902



 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 50/109 (45%), Positives = 58/109 (53%), Gaps = 9/109 (8%)

Query: 45   GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
            G  GP GP GA G  GP G  G  G  G  G +G KG +G +GL+G  GP G  GE+G  
Sbjct: 1073 GPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPS 1132

Query: 105  GETGKKGPIGPEGEKGEVG---------PIGPPGPKGDRGEQGDPGLPG 144
            G +G  GP GP G  G  G         PIGPPGP+G  G+ G  G PG
Sbjct: 1133 GASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPG 1181



 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 55/139 (39%), Positives = 63/139 (45%), Gaps = 22/139 (15%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEK 80
           A GQP      G+           G  GPPGP G  G PGP G +G PG  G  G  G  
Sbjct: 819 ADGQPGAKGEPGD-------AGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPP 871

Query: 81  GEKGTAGLRGKTGPLGLAGEKGD---------QGETGKKGPIGPEGEKGEVGPIGPPGPK 131
           G  G  G  G+ GP G +G  G          +G  G +G  GP G  GEVGP GPPGP 
Sbjct: 872 GATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931

Query: 132 GDRGE------QGDPGLPG 144
           G++G        G PG PG
Sbjct: 932 GEKGSPGADGPAGAPGTPG 950



 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 51/112 (45%), Positives = 56/112 (50%), Gaps = 12/112 (10%)

Query: 45   GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
            G  GPPG PGA G+PGP G  G  G  G  G  G  G  G  G RG  GP G  G+KG+ 
Sbjct: 1040 GPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGET 1099

Query: 105  GE------------TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            GE            +G +GP GP G  GE GP G  GP G RG  G  G PG
Sbjct: 1100 GEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPG 1151



 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 51/108 (47%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE-- 100
           + G PGPPGP GA G  G  G  G PG  G +G  G  G  G  G RG +GP G  G   
Sbjct: 369 VRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPG 428

Query: 101 -KGDQGETGKKGPIGPEGEKGEVGPI---GPPGPKGDRGEQGDPGLPG 144
            KG+ GE G  G  G  G KGE GP+   GPPGP G+ G++G  G PG
Sbjct: 429 PKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPG 476



 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 49/101 (48%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PG  G PGPPG  G PG     G PG DG  G KG  GE+G+ G  G  G  G AG  G+
Sbjct: 475 PGPTGLPGPPGERGGPGSR---GFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGE 531

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            G  G KG  G  G  G  G  GPPGP G  G  G PG PG
Sbjct: 532 AGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572



 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 40  ICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
           +   PG  G    PG  G  G PGP G +G  G+DG  G +G  G  G AG RG+ GP G
Sbjct: 579 VMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 638

Query: 97  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
             G +G  G  G  G  G  GE+G  G +G PGP G RGE+G PG  GV
Sbjct: 639 SPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV 687



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 51/110 (46%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRK---GEKGEKGTAGLRGKTGPLGLAGE 100
           PG  G PG  GANG+PG  G  G PG  G  G +   G  G KG +G  G  G  G  G 
Sbjct: 388 PGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGA 447

Query: 101 KGDQGETGKKGPIGPEGE------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
           KG+ G  G +GP GP GE      +GE GP G PGP G+RG  G  G PG
Sbjct: 448 KGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497



 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 50/109 (45%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE---KGEKGTAGLRGKTGPLGLAGEK 101
           G  G PG PG NG+PG  G  GLPG  GR G  G    +G  G  G  G  GP G AG  
Sbjct: 284 GPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 343

Query: 102 GDQGETGKKGPIGPEGEKGEVGPIG------PPGPKGDRGEQGDPGLPG 144
           G  G  G KG  GP+G +G  GP G      PPGP G  G  G+PG  G
Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG 392



 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 49/106 (46%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G PGP G PG  G  GP G  G  G  G  G +GE G  G AG  G  G  G  G KG+ 
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829

Query: 105 GETGKKGPIGPEGEKGEVGPIGP------PGPKGDRGEQGDPGLPG 144
           G+ G KG  GP G  G  GP GP      PG KG RG  G PG  G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATG 875



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 53/127 (41%), Positives = 61/127 (48%), Gaps = 25/127 (19%)

Query: 44  PGLPGPPGPPGANGSPGPHGR----------------IGLPGRDGRDGRKGEKGEKGTAG 87
           PGLPGPPGPPG  G PG  G                 I +PG  G  G +G  G  G  G
Sbjct: 138 PGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPG 197

Query: 88  LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIG---------PPGPKGDRGEQG 138
            +G  GP G  GE G  G  G +GP GP G+ G+ G  G         PPGP+G RG  G
Sbjct: 198 PQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPG 257

Query: 139 DPGLPGV 145
             GLPG+
Sbjct: 258 TAGLPGM 264



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 52/114 (45%), Positives = 55/114 (48%), Gaps = 1/114 (0%)

Query: 31  KGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRG 90
           KGE  SP      PG  GP G PG  G PG  G  G  G DG  G  G  G  G AG  G
Sbjct: 286 KGEPGSPGEN-GAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 344

Query: 91  KTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
             G +G  GE G QG  G +GP G  GE G  GP G  GP G+ G  G PG  G
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKG 398



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 60/142 (42%), Positives = 65/142 (45%), Gaps = 19/142 (13%)

Query: 21  ASGQPRGNQLKGENYSPRYICSIPGLPGP------PGPPGANGSPGPHGRIGLPGRDGR- 73
           A G+P     KG+   P       G PGP      PG  GA GS GP G  G PG  GR 
Sbjct: 825 AKGEPGDAGAKGDA-GPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRV 883

Query: 74  -----DGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGP- 127
                 G  G  G  G AG  G  GP G  G  G  GE G  GP GP GEKG  G  GP 
Sbjct: 884 GPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPA 943

Query: 128 -----PGPKGDRGEQGDPGLPG 144
                PGP+G  G++G  GLPG
Sbjct: 944 GAPGTPGPQGIAGQRGVVGLPG 965



 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 52/122 (42%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE 82
           G P     +G +  P      PG  G  GPPG +G+ GP G  G  G++G  G +GE G 
Sbjct: 857 GAPGAKGARG-SAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGP 915

Query: 83  KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGL 142
            G  G  G  GP G AGEKG  G  G  G  G  G +G  G  G  G  G RGE+G PGL
Sbjct: 916 AGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 975

Query: 143 PG 144
           PG
Sbjct: 976 PG 977



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 59/158 (37%), Positives = 69/158 (43%), Gaps = 40/158 (25%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPG---------------------- 60
           G P  N   GE   P      PG  GPPGP GA G PG                      
Sbjct: 224 GPPGKNGDDGEAGKP----GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 279

Query: 61  --PHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGE 118
             P G  G PG  G +G  G+ G +G  G RG+ G  G AG +G+ G TG  GP GP G 
Sbjct: 280 AGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGP 339

Query: 119 ------------KGEVGPIGPPGPKGDRGEQGDPGLPG 144
                       KGE GP GP G +G +G +G+PG PG
Sbjct: 340 AGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPG 377



 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 49/103 (47%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 45  GLPGPPGPPGANGSPGPHGRIG---LPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           G PGP GP G  G  GP G  G   LPG  G  G  G+ GE+G  G  G  GP G  GE+
Sbjct: 620 GPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 679

Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  GE G +GP GP G +G  G  G  G KGD G  G PG  G
Sbjct: 680 GFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQG 722



 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 50/106 (47%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 45  GLPGPPG------PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
           GLPGP G      P GA+GSPG  G  GL G  G  G  G  G+KG +G  G  GP G  
Sbjct: 737 GLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR 796

Query: 99  GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  GD+GE G  GP G  G  G  G  G  G  GD G +GD G PG
Sbjct: 797 GAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPG 842



 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 49/112 (43%), Positives = 55/112 (49%), Gaps = 12/112 (10%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           GLPGP GPPG  G PG  G  G  G  G  G +GE+G  G  G++G  GP G  G  G  
Sbjct: 644 GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAP 703

Query: 105 GETGKKGPIGP------------EGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  G KG  G             +G  GE G  G PGPKGDRG+ G  G  G
Sbjct: 704 GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADG 755



 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 56/137 (40%), Positives = 64/137 (46%), Gaps = 36/137 (26%)

Query: 44  PGLPGPPG---PPGANGS------------------PGPHGRIGLPGRDGRDGRKGEKGE 82
           PG PGP G   PPGA+G                   PGP G  G PG  G  G  G KG 
Sbjct: 805 PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGA 864

Query: 83  KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGP---------EGEKGEVGP------IGP 127
           +G+AG  G TG  G AG  G  G +G  GP GP         +G +GE GP      +GP
Sbjct: 865 RGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGP 924

Query: 128 PGPKGDRGEQGDPGLPG 144
           PGP G  GE+G PG  G
Sbjct: 925 PGPPGPAGEKGSPGADG 941



 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 50/109 (45%), Positives = 56/109 (51%), Gaps = 9/109 (8%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQ 104
           G+PGPPG  G  G  G  G  G PG  G  G +GE+G  G+ G +G  GP G  GE G  
Sbjct: 599 GVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKP 658

Query: 105 GE------TGKKGPIGPEGEK---GEVGPIGPPGPKGDRGEQGDPGLPG 144
           GE       G  GP G  GE+   GE G  GPPGP G RG  G PG  G
Sbjct: 659 GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDG 707



 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 48/106 (45%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 45   GLPGPPGPPGANGS------PGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLA 98
            G PG PGP G  G       PG  G  G PG  G  G  G++G  G +G RG  GP+G  
Sbjct: 944  GAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003

Query: 99   GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            G  G  GE+G++G  G EG  G     G PG KGDRGE G  G PG
Sbjct: 1004 GLAGPPGESGREGAPGAEGSPGR---DGSPGAKGDRGETGPAGPPG 1046



 Score = 88.2 bits (217), Expect = 8e-18
 Identities = 49/105 (46%), Positives = 55/105 (52%), Gaps = 9/105 (8%)

Query: 46  LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQG 105
           +PGP GP G  G PGP G    PG  G  G  GE GE G +G  G  GP G  G+ GD G
Sbjct: 177 VPGPMGPSGPRGLPGPPGA---PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDG 233

Query: 106 ETGK------KGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           E GK      +GP GP+G +G  G  G PG KG RG  G  G  G
Sbjct: 234 EAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG 278



 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 57/152 (37%), Positives = 68/152 (44%), Gaps = 31/152 (20%)

Query: 23  GQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGS---------PGPHGRIGLPGRDGR 73
           G P  N   G+   PR +    G PG PGP GA G+         PGP G  G PG  G 
Sbjct: 290 GSPGENGAPGQ-MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGA 348

Query: 74  DGRKGE------KGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPE----------- 116
            G KGE      +G +G  G+RG+ GP G AG  G  G  G  G  G +           
Sbjct: 349 VGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA 408

Query: 117 ----GEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
               G +G  GP GP GP G +G  G+PG PG
Sbjct: 409 PGFPGARGPSGPQGPGGPPGPKGNSGEPGAPG 440



 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 46/101 (45%), Positives = 52/101 (51%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PG  G PGP G  G  G  G  G+PG  G  G  G +GE+G  G RG  GP G AG +G 
Sbjct: 640 PGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            G  G  G  G  G  G  G  G PG +G  GE+G  GLPG
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPG 740



 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 51/121 (42%), Positives = 54/121 (44%), Gaps = 13/121 (10%)

Query: 37  PRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR-------------DGRKGEKGEK 83
           PR     PG  G PG PG  G PGP G  G PG  G               G     G  
Sbjct: 122 PRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPM 181

Query: 84  GTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP 143
           G +G RG  GP G  G +G QG  G+ G  G  G  G  GP GPPG  GD GE G PG P
Sbjct: 182 GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP 241

Query: 144 G 144
           G
Sbjct: 242 G 242



 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 46/104 (44%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 45  GLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGE---K 101
           G  GP GP G+ G  G  G  G PG  G  G  G  G  G  G +G  G  G+AG     
Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP 412

Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           G +G +G +GP GP G KG  G  G PG KGD G +G+PG  GV
Sbjct: 413 GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGV 456



 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 43/103 (41%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGP-LGLAGEK 101
           + G  G  GP G  G  GP GR G+PG+ G  G  G  G  G  GL G   P L    ++
Sbjct: 110 VEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDE 169

Query: 102 GDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
              G     GP+GP G +G  GP G PGP+G +G  G+PG PG
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPG 212



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 45/116 (38%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 25   PRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKG 84
            PRG++ +      R I    G  G  GPPG  GSP               G +G  G  G
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSP---------------GEQGPSGASG 1136

Query: 85   TAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDP 140
             AG RG  G  G  G+ G  G  G  GP GP G  G+ GP+GPPGP G  G  G P
Sbjct: 1137 PAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPP 1192



 Score = 55.1 bits (131), Expect = 7e-08
 Identities = 41/117 (35%), Positives = 43/117 (36%), Gaps = 20/117 (17%)

Query: 47  PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
           PG   P G      P G    P      G +G KG+ G  G RG  GP G  G  G  G 
Sbjct: 82  PGAEVPEGECCPVCPDGSES-PTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGL 140

Query: 107 TGKKGPIGPEGEKGEVGPI-------------------GPPGPKGDRGEQGDPGLPG 144
            G  GP GP G  G  G                     GP GP G RG  G PG PG
Sbjct: 141 PGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPG 197



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/47 (46%), Positives = 27/47 (57%)

Query: 99  GEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           G +G +G+TG +GP GP G  G  G  G PG  G  G  G PG PG+
Sbjct: 109 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGL 155



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/12 (83%), Positives = 10/12 (83%)

Query: 44   PGLPGPPGPPGA 55
            PG PGPPGPP A
Sbjct: 1183 PGPPGPPGPPSA 1194


>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
          Length = 717

 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 466 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 525

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  +PG+
Sbjct: 526 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 569



 Score =  108 bits (269), Expect = 7e-24
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           +G P      GE  +P     +PGLPGP   PGPPG  G PGP G  GL G  G  G +G
Sbjct: 547 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 604

Query: 79  EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
           EKG++G  GL G +            GP+G+ G  G +GE G K                
Sbjct: 605 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 664

Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
             GP G +G +GE G  G  GPKGD+G+QG PGL   C  G
Sbjct: 665 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 705



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 59/128 (46%), Positives = 65/128 (50%), Gaps = 25/128 (19%)

Query: 42  SIPGLPGPPGPPGANGS------PGPHGRIGLPGRDGR------DGRKGEKGEKGTAGLR 89
           SI G PGPPGPPG +G       PGP G  GLPG  G        G  G KGE+G  G+ 
Sbjct: 267 SIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 326

Query: 90  GKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGD--------RGE 136
           GK G  G     +AG KG+ G  G KG  G EG  G  G +G  G KGD        RGE
Sbjct: 327 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGE 386

Query: 137 QGDPGLPG 144
            G PGLPG
Sbjct: 387 PGPPGLPG 394



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 379 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 438

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 439 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 494



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
           + G  G PG PG  G  G  G+ G PG  G  G KG            +G  G  GL+G 
Sbjct: 525 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 584

Query: 92  TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
            GP G A      GEKG QGE G +GP+            GP G  G +G  GP GPKG+
Sbjct: 585 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 644

Query: 134 RGEQGDPGLPG 144
           RG +GDPG+ G
Sbjct: 645 RGSKGDPGMTG 655



 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 19/109 (17%)

Query: 41  CSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGR--------KGEKGEKGTAGLRGKT 92
           C+ P  PGPPGP G  G PG  G IG+PGR G  G         +G  G+ GT G  G  
Sbjct: 117 CNCP--PGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 174

Query: 93  GPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG 141
           GP+GL          GK G  GP+G+ G  GP G PGP+G +GE+G  G
Sbjct: 175 GPIGL---------DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCG 214



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 377 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 432

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 433 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 492

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 493 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 539



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 338 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 397

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 398 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 457

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 458 RTLALMGPPGLPGQIGPPGAPGI 480



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 53/155 (34%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 171 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 230

Query: 88  -------------------------------------LRGKTGPLGLAGEKGDQGETGKK 110
                                                ++G  GP G  G  G  G  G  
Sbjct: 231 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 290

Query: 111 GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
           GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 291 GPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 325



 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 10/106 (9%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PG   PPGPPG      P GR GLPG  G  G  G  G  G AGL    GP G  G+ G 
Sbjct: 115 PGCNCPPGPPG------PTGRPGLPGDKGAIGMPGRVGSPGDAGL-SIIGPRGPPGQPGT 167

Query: 104 QGETGKKGPIGPEGEKGEVGP---IGPPGPKGDRGEQGDPGLPGVC 146
           +G  G  GPIG +G+ G  GP   +G  GP G  G QG  G  G C
Sbjct: 168 RGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQC 213



 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 50/144 (34%), Positives = 58/144 (40%), Gaps = 47/144 (32%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  GPPG PG  G PG  G IGL      DG+ G  G KG  GL G  G  G  G+K
Sbjct: 154 SIIGPRGPPGQPGTRGFPGFPGPIGL------DGKPGHPGPKGDMGLTGPPGQPGPQGQK 207

Query: 102 GDQGETG-----------------------KKGPI------------------GPEGEKG 120
           G++G+ G                       K  P+                  G + +  
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267

Query: 121 EVGPIGPPGPKGDRGEQGDPGLPG 144
             GP GPPGP G  G  G PGLPG
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPG 291



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 73  RDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
           R  R+  K   G     G  GP G  G  GD+G  G  G +G  G+ G +  IGP GP G
Sbjct: 105 RRRREAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAG-LSIIGPRGPPG 163

Query: 133 DRGEQGDPGLPG 144
             G +G PG PG
Sbjct: 164 QPGTRGFPGFPG 175



 Score = 28.9 bits (63), Expect = 5.7
 Identities = 35/132 (26%), Positives = 47/132 (35%), Gaps = 42/132 (31%)

Query: 55  ANGSPGPHGRIGLPGRDGRDGRKGEKGEK----GTAGLRG-------------------K 91
           A G+ GP G +G PG       + E+G +    G+ GL                     +
Sbjct: 11  ATGARGP-GELGAPGTVALVAARAERGARLPSPGSCGLLTLALCSLALSLLAHFRTAELQ 69

Query: 92  TGPLGLAGEKGDQG-ETGKKGPIG-----------------PEGEKGEVGPIGPPGPKGD 133
              L L  E+G+Q  ET   G +                  P+   G   P GPPGP G 
Sbjct: 70  ARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTGR 129

Query: 134 RGEQGDPGLPGV 145
            G  GD G  G+
Sbjct: 130 PGLPGDKGAIGM 141


>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
          Length = 655

 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 404 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 463

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  +PG+
Sbjct: 464 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 507



 Score =  108 bits (269), Expect = 7e-24
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           +G P      GE  +P     +PGLPGP   PGPPG  G PGP G  GL G  G  G +G
Sbjct: 485 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 542

Query: 79  EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
           EKG++G  GL G +            GP+G+ G  G +GE G K                
Sbjct: 543 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 602

Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
             GP G +G +GE G  G  GPKGD+G+QG PGL   C  G
Sbjct: 603 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 643



 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 48/101 (47%), Positives = 56/101 (55%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G     G    A  +G 
Sbjct: 150 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGP 209

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
            G  G  GP GP G  G  GP+GPPG  G  G +GDPG+ G
Sbjct: 210 PGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 250



 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 61/147 (41%), Positives = 69/147 (46%), Gaps = 28/147 (19%)

Query: 20  CASGQPRGNQLKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE 79
           C     RG Q +     P      PG PGPPGP G  G PG  G +G PG  G  G KG+
Sbjct: 192 CGEYPHRGEQSQASIQGP------PGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGD 245

Query: 80  ---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEKGEVGPI 125
                    KGE+G  G+ GK G  G     +AG KG+ G  G KG  G EG  G  G +
Sbjct: 246 PGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 305

Query: 126 GPPGPKGD--------RGEQGDPGLPG 144
           G  G KGD        RGE G PGLPG
Sbjct: 306 GQKGEKGDAGNSIGGGRGEPGPPGLPG 332



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 317 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 376

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 377 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 432



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
           + G  G PG PG  G  G  G+ G PG  G  G KG            +G  G  GL+G 
Sbjct: 463 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 522

Query: 92  TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
            GP G A      GEKG QGE G +GP+            GP G  G +G  GP GPKG+
Sbjct: 523 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 582

Query: 134 RGEQGDPGLPG 144
           RG +GDPG+ G
Sbjct: 583 RGSKGDPGMTG 593



 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 3/106 (2%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE---KGEKGTAGLRGKTGPLGLAG 99
           + G PG PGP G  G  GP G+ G  G+ G  G+ GE   +GE+  A ++G  GP G  G
Sbjct: 158 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPG 217

Query: 100 EKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGV 145
             G  G  G  GP+GP G  G  GP G PG +G  G +G+ G+PG+
Sbjct: 218 PSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGM 263



 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 47/115 (40%), Positives = 55/115 (47%), Gaps = 14/115 (12%)

Query: 44  PGLPGPP--------------GPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLR 89
           PG   PP              GP G  G PG  G  G PG  G DG+ G  G KG  GL 
Sbjct: 115 PGCNCPPAPQGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLT 174

Query: 90  GKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G  G  G  G+KG++G+ G+    G + +    GP GPPGP G  G  G PGLPG
Sbjct: 175 GPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 229



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 315 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 370

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 371 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 430

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 431 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 477



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 276 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 335

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 336 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 395

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 396 RTLALMGPPGLPGQIGPPGAPGI 418



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 38/100 (38%), Positives = 43/100 (43%), Gaps = 20/100 (20%)

Query: 49  PPGPPGANGSPGPHGRIGLPGRDGRD--GRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
           P   PG N  P P G    PG  G    G +G  G+ GT G  G  GP+GL         
Sbjct: 111 PKTSPGCNCPPAPQGS---PGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGL--------- 158

Query: 107 TGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVC 146
            GK G  GP+G+ G  GP G P      G QG  G  G C
Sbjct: 159 DGKPGHPGPKGDMGLTGPPGQP------GPQGQKGEKGQC 192


>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
          Length = 657

 Score =  112 bits (281), Expect = 3e-25
 Identities = 56/104 (53%), Positives = 65/104 (62%), Gaps = 2/104 (1%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGD 103
           PGLPG  GPPGA G PG  G IGLPG  G DG KG +G+ G  G  G  GP G  G  G 
Sbjct: 406 PGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGV 465

Query: 104 QGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPG--LPGV 145
           +GE G  G  G +GEKGE G  G PG KG+ GE+G+PG  +PG+
Sbjct: 466 KGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 509



 Score =  108 bits (269), Expect = 7e-24
 Identities = 64/161 (39%), Positives = 78/161 (48%), Gaps = 35/161 (21%)

Query: 22  SGQPRGNQLKGENYSPRYICSIPGLPGP---PGPPGANGSPGPHGRIGLPGRDGRDGRKG 78
           +G P      GE  +P     +PGLPGP   PGPPG  G PGP G  GL G  G  G +G
Sbjct: 487 AGSPGEKGEAGEKGNPG--AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQG 544

Query: 79  EKGEKGTAGLRGKT------------GPLGLAGEKGDQGETGKK---------------- 110
           EKG++G  GL G +            GP+G+ G  G +GE G K                
Sbjct: 545 EKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 604

Query: 111 --GPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCG 149
             GP G +G +GE G  G  GPKGD+G+QG PGL   C  G
Sbjct: 605 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLG 645



 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 67/153 (43%), Positives = 75/153 (49%), Gaps = 29/153 (18%)

Query: 20  CASGQP---RGNQ---LKGENYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGR 73
           C S  P   R +Q   LKGE  S   I   PG PGPPGP G  G PG  G +G PG  G 
Sbjct: 183 CLSSMPAALRSSQIIALKGEQ-SQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP 241

Query: 74  DGRKGE---------KGEKGTAGLRGKTGPLG-----LAGEKGDQGETGKKGPIGPEGEK 119
            G KG+         KGE+G  G+ GK G  G     +AG KG+ G  G KG  G EG  
Sbjct: 242 PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSP 301

Query: 120 GEVGPIGPPGPKGD--------RGEQGDPGLPG 144
           G  G +G  G KGD        RGE G PGLPG
Sbjct: 302 GLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPG 334



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 51/116 (43%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEK 101
           SI G  G PGPPG  G PGP G  G+ G+ G  G+ G+KGE+G AG +G  GP G  GE 
Sbjct: 319 SIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEP 378

Query: 102 GDQGETGKKGPI-------------GPEGEKGEVGPIGPPGPKGDRGEQGDPGLPG 144
           G        G I             GP G  G++GP G PG  G +GE G PG PG
Sbjct: 379 GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPG 434



 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 53/131 (40%), Positives = 63/131 (48%), Gaps = 29/131 (22%)

Query: 43  IPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGE-----------KGEKGTAGLRGK 91
           + G  G PG PG  G  G  G+ G PG  G  G KG            +G  G  GL+G 
Sbjct: 465 VKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGV 524

Query: 92  TGPLGLA------GEKGDQGETGKKGPI------------GPEGEKGEVGPIGPPGPKGD 133
            GP G A      GEKG QGE G +GP+            GP G  G +G  GP GPKG+
Sbjct: 525 PGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGE 584

Query: 134 RGEQGDPGLPG 144
           RG +GDPG+ G
Sbjct: 585 RGSKGDPGMTG 595



 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 49/133 (36%), Positives = 61/133 (45%), Gaps = 31/133 (23%)

Query: 44  PGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG---------------- 87
           PG PGP G  G  G PGP G +GL G  G+ G +G+KGEKG  G                
Sbjct: 133 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 192

Query: 88  ---------------LRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKG 132
                          ++G  GP G  G  G  G  G  GP+GP G  G  GP G PG +G
Sbjct: 193 SSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQG 252

Query: 133 DRGEQGDPGLPGV 145
             G +G+ G+PG+
Sbjct: 253 YHGRKGERGMPGM 265



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 60/167 (35%), Positives = 67/167 (40%), Gaps = 53/167 (31%)

Query: 27  GNQLKGENYSPRYICSIPGLPGPPGPPGANG---------SPGPHGRIGLPGRDGRDGRK 77
           GN + G    P      PGLPGPPGP G  G          PG  G  G  G  G DG K
Sbjct: 317 GNSIGGGRGEP----GPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPK 372

Query: 78  GEKGEKGTA-------------------------GLRGKTGPLGLAGEKGDQGETGKKGP 112
           G KGE G                           GL G+ GP G  G  G +GE G  GP
Sbjct: 373 GSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGP 432

Query: 113 IGPEGEKG------EVGPIGPPGP---------KGDRGEQGDPGLPG 144
            G +GEKG      ++GP GP GP         KG+ G  G PG  G
Sbjct: 433 PGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 479



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 39/143 (27%)

Query: 42  SIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGE------------------- 82
           ++ G+ G PG PG  G  G  G  GLPG  G+ G KG+ G                    
Sbjct: 278 AVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPG 337

Query: 83  -KGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGP----------------- 124
            KG AG+ G+ GP G  G+KG++G  G++GP GP+G KGE G                  
Sbjct: 338 PKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEI 397

Query: 125 --IGPPGPKGDRGEQGDPGLPGV 145
             +   GP G  G+ G PG PG+
Sbjct: 398 RTLALMGPPGLPGQIGPPGAPGI 420



 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 19/117 (16%)

Query: 47  PGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGE 106
           PG   PP   G PG  G  G PG  G DG+ G  G KG  GL G  G  G  G+KG++G+
Sbjct: 115 PGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQ 174

Query: 107 TGK----------------KGPIGPEGEKGEV---GPIGPPGPKGDRGEQGDPGLPG 144
            G+                   I  +GE+ +    GP GPPGP G  G  G PGLPG
Sbjct: 175 CGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG 231



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 15/67 (22%)

Query: 80  KGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGD 139
           +G+ GT G  G  GP+GL          GK G  GP+G+ G  GP G P      G QG 
Sbjct: 124 QGQPGTRGFPGFPGPIGL---------DGKPGHPGPKGDMGLTGPPGQP------GPQGQ 168

Query: 140 PGLPGVC 146
            G  G C
Sbjct: 169 KGEKGQC 175


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.143    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,240,234
Number of Sequences: 37866
Number of extensions: 1059656
Number of successful extensions: 38057
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 4399
Number of HSP's gapped (non-prelim): 7109
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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