TBL3 11577

Name: TBL3	Sequence: fasta or formatted (808aa)		NCBI GI: 19913369
Description: transducin beta-like 3		Referenced in: Nucleus and Nucleolus WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 87 3 C cysteine 3.0 24 2 D aspartate 5.3 43 2 E glutamate 5.4 44 2 F phenylalanine 3.2 26 1 G glycine 6.1 49 2 H histidine 3.7 30 2 I isoleucine 2.6 21 2 K lysine 3.8 31 1 L leucine 12.5 101 3 M methionine 1.0 8 1 N asparagine 2.0 16 2 P proline 4.0 32 2 Q glutamine 5.6 45 2 R arginine 5.9 48 2 S serine 6.4 52 2 T threonine 6.9 56 2 V valine 8.0 65 3 W tryptophan 2.4 19 1 Y tyrosine 1.4 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transducin beta-like 3 WDR69 0.059 WD repeat domain 69 PAFAH1B1 0.057 platelet-activating factor acetylhydrolase, isoform I... FBXW11 0.054 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.054 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.054 F-box and WD repeat domain containing 11 isoform B [... BTRC 0.053 beta-transducin repeat containing protein isoform 2 [... BTRC 0.053 beta-transducin repeat containing protein isoform 1 ... WDR51A 0.053 WD repeat domain 51A isoform 2 WDR51A 0.053 WD repeat domain 51A isoform 1 TEP1 0.052 telomerase-associated protein 1 WDR51B 0.051 WD repeat domain 51B WDR3 0.051 WD repeat-containing protein 3 WDR51A 0.050 WD repeat domain 51A isoform 3 TAF5L 0.050 PCAF associated factor 65 beta isoform a TAF5 0.049 TBP-associated factor 5 WDR5B 0.048 WD repeat domain 5B WDR5 0.048 WD repeat domain 5 WDR5 0.048 WD repeat domain 5 WDR61 0.047 WD repeat domain 61 NLE1 0.045 Notchless gene homolog isoform a WDR48 0.044 WD repeat domain 48 WDR38 0.044 WD repeat domain 38 CIAO1 0.043 WD repeat domain 39 ATG16L1 0.043 APG16 autophagy 16-like isoform 1 ATG16L1 0.043 APG16 autophagy 16-like isoform 2 KATNB1 0.043 katanin p80 subunit B 1 SMU1 0.042 smu-1 suppressor of mec-8 and unc-52 homolog SPAG16 0.042 sperm associated antigen 16 isoform 1 PAAF1 0.042 proteasomal ATPase-associated factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.