Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBXW11 Sequence: fasta or formatted (508aa) NCBI GI: 48928048
Description:

F-box and WD repeat domain containing 11 isoform A

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [529aa] F-box and WD repeat domain containing 11 isoform B
alt prot [542aa] F-box and WD repeat domain containing 11 isoform C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         20           2
 C cysteine            3.1         16           1
 D aspartate           7.3         37           2
 E glutamate           6.1         31           2
 F phenylalanine       2.6         13           1
 G glycine             5.1         26           1
 H histidine           3.0         15           2
 I isoleucine          7.5         38           2
 K lysine              4.7         24           2
 L leucine             9.3         47           1
 M methionine          1.6          8           1
 N asparagine          3.9         20           1
 P proline             2.8         14           2
 Q glutamine           3.5         18           1
 R arginine            8.1         41           2
 S serine              9.3         47           3
 T threonine           5.3         27           1
 V valine              7.3         37           2
 W tryptophan          2.6         13           1
 Y tyrosine            3.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 11 isoform A [... 
FBXW11                0.988   F-box and WD repeat domain containing 11 isoform B [...
FBXW11                0.983   F-box and WD repeat domain containing 11 isoform C [...
BTRC                  0.872   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.872   beta-transducin repeat containing protein isoform 1 ...
FBXW7                 0.212   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.212   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.212   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR69                 0.117   WD repeat domain 69 
TRAF7                 0.103   TNF receptor-associated factor 7 
WDR5                  0.099   WD repeat domain 5 
WDR5                  0.099   WD repeat domain 5 
WDR5B                 0.099   WD repeat domain 5B 
PAFAH1B1              0.097   platelet-activating factor acetylhydrolase, isoform I...
WDR86                 0.097   WD repeat domain 86 
TBL3                  0.086   transducin beta-like 3 
NLE1                  0.085   Notchless gene homolog isoform a 
KATNB1                0.084   katanin p80 subunit B 1 
WDR38                 0.084   WD repeat domain 38 
TAF5                  0.079   TBP-associated factor 5 
FBXW2                 0.079   F-box and WD repeat domain containing 2 
TBL1XR1               0.076   transducin (beta)-like 1 X-linked receptor 1 
PLRG1                 0.074   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
COPB2                 0.073   coatomer protein complex, subunit beta 2 (beta prime)...
WDR3                  0.073   WD repeat-containing protein 3 
TBL1Y                 0.073   transducin beta-like 1Y 
TBL1Y                 0.073   transducin beta-like 1Y 
TBL1Y                 0.073   transducin beta-like 1Y 
FBXW10                0.073   F-box and WD-40 domain protein 10 
CDRT1                 0.072   CMT1A duplicated region transcript 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press