Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: WDR51A Sequence: fasta or formatted (407aa) NCBI GI: 239787754
Description:

WD repeat domain 51A isoform 1

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [359aa] WD repeat domain 51A isoform 2
alt prot [369aa] WD repeat domain 51A isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         26           3
 C cysteine            2.5         10           1
 D aspartate           5.9         24           2
 E glutamate           3.9         16           1
 F phenylalanine       4.2         17           1
 G glycine             6.1         25           2
 H histidine           4.9         20           1
 I isoleucine          2.7         11           1
 K lysine              4.7         19           1
 L leucine             7.9         32           2
 M methionine          2.2          9           1
 N asparagine          2.5         10           1
 P proline             4.9         20           2
 Q glutamine           4.9         20           2
 R arginine            5.2         21           1
 S serine             10.3         42           2
 T threonine           7.9         32           2
 V valine              9.6         39           1
 W tryptophan          1.7          7           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 51A isoform 1 
WDR51A                0.904   WD repeat domain 51A isoform 3 
WDR51A                0.856   WD repeat domain 51A isoform 2 
WDR51B                0.493   WD repeat domain 51B 
WDR69                 0.169   WD repeat domain 69 
PAFAH1B1              0.163   platelet-activating factor acetylhydrolase, isoform I...
WDR5B                 0.162   WD repeat domain 5B 
WDR5                  0.137   WD repeat domain 5 
WDR5                  0.137   WD repeat domain 5 
SPAG16                0.132   sperm associated antigen 16 isoform 1 
FBXW7                 0.130   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.130   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.130   F-box and WD repeat domain containing 7 isoform 2 [H...
NLE1                  0.130   Notchless gene homolog isoform a 
KATNB1                0.128   katanin p80 subunit B 1 
SNRNP40               0.127   WD repeat domain 57 (U5 snRNP specific) 
TAF5                  0.125   TBP-associated factor 5 
WDR38                 0.123   WD repeat domain 38 
GNB5                  0.123   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.123   guanine nucleotide-binding protein, beta-5 subunit i...
PRPF19                0.114   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TBL1XR1               0.114   transducin (beta)-like 1 X-linked receptor 1 
ATG16L1               0.112   APG16 autophagy 16-like isoform 1 
ATG16L1               0.112   APG16 autophagy 16-like isoform 2 
TBL1Y                 0.112   transducin beta-like 1Y 
TBL1Y                 0.112   transducin beta-like 1Y 
TBL1Y                 0.112   transducin beta-like 1Y 
TBL1X                 0.111   transducin beta-like 1X isoform b 
TBL1X                 0.111   transducin beta-like 1X isoform b 
TBL1X                 0.111   transducin beta-like 1X isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press