CIAO1 30591

Name: CIAO1	Sequence: fasta or formatted (339aa)		NCBI GI: 4757988
Description: WD repeat domain 39		Referenced in: Iron, Copper, and Arsenic Metabolism WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 27 1 C cysteine 5.3 18 2 D aspartate 8.0 27 2 E glutamate 6.5 22 3 F phenylalanine 2.4 8 1 G glycine 6.2 21 2 H histidine 3.2 11 1 I isoleucine 2.7 9 1 K lysine 3.5 12 2 L leucine 8.0 27 2 M methionine 0.3 1 1 N asparagine 2.9 10 1 P proline 4.4 15 1 Q glutamine 4.1 14 2 R arginine 4.7 16 2 S serine 9.7 33 1 T threonine 5.6 19 2 V valine 7.4 25 2 W tryptophan 5.0 17 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 39 TBL1XR1 0.140 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.138 transducin beta-like 1X isoform b TBL1X 0.138 transducin beta-like 1X isoform b TBL1X 0.138 transducin beta-like 1X isoform a TBL1X 0.138 transducin beta-like 1X isoform a TBL1Y 0.137 transducin beta-like 1Y TBL1Y 0.137 transducin beta-like 1Y TBL1Y 0.137 transducin beta-like 1Y PAFAH1B1 0.117 platelet-activating factor acetylhydrolase, isoform I... SEC13 0.110 SEC13 protein isoform 2 SEC13 0.110 SEC13 protein isoform 1 SPAG16 0.105 sperm associated antigen 16 isoform 1 PRPF4 0.105 PRP4 pre-mRNA processing factor 4 homolog WDR5 0.103 WD repeat domain 5 WDR5 0.103 WD repeat domain 5 WDR51B 0.102 WD repeat domain 51B WDR69 0.100 WD repeat domain 69 TBL3 0.099 transducin beta-like 3 WDR51A 0.097 WD repeat domain 51A isoform 3 WDR51A 0.097 WD repeat domain 51A isoform 2 WDR51A 0.097 WD repeat domain 51A isoform 1 NLE1 0.097 Notchless gene homolog isoform a WDR38 0.095 WD repeat domain 38 WDR5B 0.095 WD repeat domain 5B WDR26 0.088 WD repeat domain 26 isoform b WDR26 0.088 WD repeat domain 26 isoform a TAF5 0.086 TBP-associated factor 5 WDR3 0.086 WD repeat-containing protein 3 WDR33 0.086 WD repeat domain 33 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.