PAFAH1B1 29973

Name: PAFAH1B1	Sequence: fasta or formatted (410aa)		NCBI GI: 4557741
Description: platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit		Referenced in: Dynein and Dynactin Lipid Metabolism WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 21 1 C cysteine 2.4 10 1 D aspartate 6.3 26 2 E glutamate 7.6 31 2 F phenylalanine 3.4 14 1 G glycine 6.1 25 2 H histidine 3.9 16 1 I isoleucine 3.9 16 1 K lysine 8.3 34 2 L leucine 6.6 27 2 M methionine 2.9 12 1 N asparagine 2.7 11 1 P proline 3.2 13 2 Q glutamine 2.4 10 1 R arginine 5.4 22 1 S serine 9.0 37 2 T threonine 6.6 27 1 V valine 8.8 36 2 W tryptophan 2.9 12 1 Y tyrosine 2.4 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 platelet-activating factor acetylhydrolase, isoform I... WDR5 0.196 WD repeat domain 5 WDR5 0.196 WD repeat domain 5 WDR5B 0.187 WD repeat domain 5B WDR69 0.168 WD repeat domain 69 FBXW7 0.167 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.167 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.167 F-box and WD repeat domain containing 7 isoform 2 [H... WDR51A 0.160 WD repeat domain 51A isoform 2 WDR51A 0.160 WD repeat domain 51A isoform 1 WDR51A 0.147 WD repeat domain 51A isoform 3 WDR38 0.145 WD repeat domain 38 WDR51B 0.142 WD repeat domain 51B NLE1 0.132 Notchless gene homolog isoform a GNB2L1 0.128 guanine nucleotide binding protein (G protein), beta ... PRPF4 0.127 PRP4 pre-mRNA processing factor 4 homolog BTRC 0.126 beta-transducin repeat containing protein isoform 2 [... BTRC 0.126 beta-transducin repeat containing protein isoform 1 ... PLRG1 0.126 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... KATNB1 0.122 katanin p80 subunit B 1 FBXW11 0.120 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.120 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.120 F-box and WD repeat domain containing 11 isoform B [... SPAG16 0.115 sperm associated antigen 16 isoform 1 SNRNP40 0.114 WD repeat domain 57 (U5 snRNP specific) COPB2 0.113 coatomer protein complex, subunit beta 2 (beta prime)... TBL1Y 0.112 transducin beta-like 1Y TBL1Y 0.112 transducin beta-like 1Y TBL1Y 0.112 transducin beta-like 1Y TBL3 0.112 transducin beta-like 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.