WDR48 10295

Name: WDR48	Sequence: fasta or formatted (677aa)		NCBI GI: 18874090
Description: WD repeat domain 48		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 41 2 C cysteine 2.2 15 2 D aspartate 7.5 51 1 E glutamate 5.2 35 3 F phenylalanine 2.4 16 1 G glycine 5.8 39 2 H histidine 3.0 20 2 I isoleucine 5.2 35 2 K lysine 7.2 49 2 L leucine 9.3 63 3 M methionine 2.1 14 1 N asparagine 6.2 42 3 P proline 3.7 25 3 Q glutamine 3.8 26 2 R arginine 4.9 33 2 S serine 6.5 44 3 T threonine 6.9 47 2 V valine 7.4 50 1 W tryptophan 2.2 15 1 Y tyrosine 2.5 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 48 WDR5 0.064 WD repeat domain 5 WDR5 0.064 WD repeat domain 5 WDR5B 0.063 WD repeat domain 5B PAFAH1B1 0.063 platelet-activating factor acetylhydrolase, isoform I... WDR51B 0.055 WD repeat domain 51B WDR51A 0.054 WD repeat domain 51A isoform 3 WDR51A 0.054 WD repeat domain 51A isoform 2 WDR51A 0.054 WD repeat domain 51A isoform 1 TBL3 0.052 transducin beta-like 3 SNRNP40 0.052 WD repeat domain 57 (U5 snRNP specific) WDR86 0.052 WD repeat domain 86 FBXW11 0.051 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.051 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.051 F-box and WD repeat domain containing 11 isoform B [... FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.050 F-box and WD repeat domain containing 7 isoform 2 [H... WDR69 0.050 WD repeat domain 69 SPAG16 0.049 sperm associated antigen 16 isoform 1 BTRC 0.048 beta-transducin repeat containing protein isoform 2 [... BTRC 0.048 beta-transducin repeat containing protein isoform 1 ... NLE1 0.045 Notchless gene homolog isoform a KATNB1 0.045 katanin p80 subunit B 1 COPA 0.045 coatomer protein complex, subunit alpha isoform 1 [... COPA 0.045 coatomer protein complex, subunit alpha isoform 2 [... WDR38 0.045 WD repeat domain 38 GNB2L1 0.044 guanine nucleotide binding protein (G protein), beta ... PLRG1 0.043 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... PRPF19 0.042 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.