Guide to the Human Genome
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Name: FBXW11 Sequence: fasta or formatted (529aa) NCBI GI: 48928046
Description:

F-box and WD repeat domain containing 11 isoform B

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [508aa] F-box and WD repeat domain containing 11 isoform A
alt prot [542aa] F-box and WD repeat domain containing 11 isoform C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         20           2
 C cysteine            3.0         16           1
 D aspartate           7.4         39           2
 E glutamate           6.4         34           2
 F phenylalanine       2.5         13           1
 G glycine             4.9         26           1
 H histidine           2.8         15           2
 I isoleucine          7.2         38           2
 K lysine              4.9         26           2
 L leucine             9.1         48           1
 M methionine          1.7          9           1
 N asparagine          4.3         23           1
 P proline             2.8         15           2
 Q glutamine           3.8         20           1
 R arginine            7.8         41           2
 S serine              9.3         49           3
 T threonine           5.5         29           1
 V valine              7.2         38           2
 W tryptophan          2.6         14           1
 Y tyrosine            3.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 11 isoform B [... 
FBXW11                0.947   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.946   F-box and WD repeat domain containing 11 isoform C [...
BTRC                  0.843   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.836   beta-transducin repeat containing protein isoform 1 ...
FBXW7                 0.204   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.204   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.204   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR69                 0.112   WD repeat domain 69 
TRAF7                 0.099   TNF receptor-associated factor 7 
WDR5                  0.095   WD repeat domain 5 
WDR5                  0.095   WD repeat domain 5 
WDR5B                 0.095   WD repeat domain 5B 
PAFAH1B1              0.093   platelet-activating factor acetylhydrolase, isoform I...
WDR86                 0.093   WD repeat domain 86 
TBL3                  0.082   transducin beta-like 3 
NLE1                  0.081   Notchless gene homolog isoform a 
KATNB1                0.080   katanin p80 subunit B 1 
WDR38                 0.080   WD repeat domain 38 
TAF5                  0.075   TBP-associated factor 5 
FBXW2                 0.075   F-box and WD repeat domain containing 2 
TBL1XR1               0.073   transducin (beta)-like 1 X-linked receptor 1 
PLRG1                 0.071   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
COPB2                 0.070   coatomer protein complex, subunit beta 2 (beta prime)...
WDR3                  0.070   WD repeat-containing protein 3 
TBL1Y                 0.070   transducin beta-like 1Y 
TBL1Y                 0.070   transducin beta-like 1Y 
TBL1Y                 0.070   transducin beta-like 1Y 
FBXW10                0.070   F-box and WD-40 domain protein 10 
CDRT1                 0.069   CMT1A duplicated region transcript 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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