TAF5 12643

Name: TAF5	Sequence: fasta or formatted (800aa)		NCBI GI: 21071067
Description: TBP-associated factor 5		Referenced in: RNA Polymerase and General Transcription Factors WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 71 3 C cysteine 1.1 9 1 D aspartate 6.6 53 2 E glutamate 6.5 52 2 F phenylalanine 3.5 28 2 G glycine 9.0 72 4 H histidine 2.8 22 1 I isoleucine 2.9 23 1 K lysine 5.5 44 4 L leucine 9.5 76 3 M methionine 1.6 13 1 N asparagine 3.6 29 2 P proline 6.0 48 2 Q glutamine 3.5 28 2 R arginine 4.5 36 2 S serine 8.0 64 3 T threonine 5.9 47 2 V valine 6.5 52 2 W tryptophan 1.0 8 1 Y tyrosine 3.1 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 5 TAF5L 0.218 PCAF associated factor 65 beta isoform a WDR5 0.076 WD repeat domain 5 WDR5 0.076 WD repeat domain 5 WDR5B 0.075 WD repeat domain 5B WDR38 0.070 WD repeat domain 38 KATNB1 0.070 katanin p80 subunit B 1 WDR51B 0.070 WD repeat domain 51B WDR69 0.069 WD repeat domain 69 WDR51A 0.063 WD repeat domain 51A isoform 3 WDR51A 0.063 WD repeat domain 51A isoform 2 WDR51A 0.063 WD repeat domain 51A isoform 1 TBL1XR1 0.061 transducin (beta)-like 1 X-linked receptor 1 FBXW7 0.058 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.058 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.058 F-box and WD repeat domain containing 7 isoform 2 [H... GNB5 0.058 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.058 guanine nucleotide-binding protein, beta-5 subunit i... TBL1Y 0.057 transducin beta-like 1Y TBL1Y 0.057 transducin beta-like 1Y TBL1Y 0.057 transducin beta-like 1Y SPAG16 0.056 sperm associated antigen 16 isoform 1 PAFAH1B1 0.056 platelet-activating factor acetylhydrolase, isoform I... GNB1 0.056 guanine nucleotide-binding protein, beta-1 subunit [... TBL1X 0.055 transducin beta-like 1X isoform b TBL1X 0.055 transducin beta-like 1X isoform b TBL1X 0.055 transducin beta-like 1X isoform a TBL1X 0.055 transducin beta-like 1X isoform a GNB2 0.055 guanine nucleotide-binding protein, beta-2 subunit [... PRPF4 0.055 PRP4 pre-mRNA processing factor 4 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.