Guide to the Human Genome
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Name: WDR51B Sequence: fasta or formatted (478aa) NCBI GI: 26665869
Description:

WD repeat domain 51B

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         26           2
 C cysteine            2.1         10           1
 D aspartate           6.5         31           1
 E glutamate           5.0         24           2
 F phenylalanine       4.8         23           1
 G glycine             5.2         25           2
 H histidine           3.6         17           1
 I isoleucine          4.0         19           1
 K lysine              6.5         31           3
 L leucine            10.3         49           2
 M methionine          1.5          7           1
 N asparagine          3.6         17           2
 P proline             5.0         24           2
 Q glutamine           4.0         19           2
 R arginine            4.6         22           1
 S serine              9.2         44           2
 T threonine           8.4         40           4
 V valine              6.5         31           2
 W tryptophan          1.7          8           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 51B 
WDR51A                0.419   WD repeat domain 51A isoform 1 
WDR51A                0.419   WD repeat domain 51A isoform 2 
WDR51A                0.377   WD repeat domain 51A isoform 3 
WDR69                 0.141   WD repeat domain 69 
WDR5B                 0.131   WD repeat domain 5B 
WDR5                  0.130   WD repeat domain 5 
WDR5                  0.130   WD repeat domain 5 
SPAG16                0.124   sperm associated antigen 16 isoform 1 
PAFAH1B1              0.123   platelet-activating factor acetylhydrolase, isoform I...
KATNB1                0.120   katanin p80 subunit B 1 
TAF5                  0.117   TBP-associated factor 5 
TBL1XR1               0.114   transducin (beta)-like 1 X-linked receptor 1 
PRPF4                 0.111   PRP4 pre-mRNA processing factor 4 homolog 
WDR38                 0.110   WD repeat domain 38 
TBL1X                 0.109   transducin beta-like 1X isoform b 
TBL1X                 0.109   transducin beta-like 1X isoform b 
TBL1X                 0.109   transducin beta-like 1X isoform a 
TBL1X                 0.109   transducin beta-like 1X isoform a 
NLE1                  0.109   Notchless gene homolog isoform a 
SNRNP40               0.105   WD repeat domain 57 (U5 snRNP specific) 
TBL1Y                 0.105   transducin beta-like 1Y 
TBL1Y                 0.105   transducin beta-like 1Y 
TBL1Y                 0.105   transducin beta-like 1Y 
TAF5L                 0.097   PCAF associated factor 65 beta isoform a 
ATG16L1               0.096   APG16 autophagy 16-like isoform 1 
ATG16L1               0.096   APG16 autophagy 16-like isoform 2 
FBXW7                 0.093   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.093   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.093   F-box and WD repeat domain containing 7 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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