TAF5L 35738

Name: TAF5L	Sequence: fasta or formatted (589aa)		NCBI GI: 7657439
Description: PCAF associated factor 65 beta isoform a		Referenced in: RNA Polymerase and General Transcription Factors WD Repeat Proteins
Other entries for this name: alt prot [325aa] PCAF associated factor 65 beta isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 38 2 C cysteine 2.0 12 1 D aspartate 6.5 38 2 E glutamate 4.9 29 3 F phenylalanine 3.4 20 1 G glycine 5.1 30 1 H histidine 2.7 16 1 I isoleucine 3.7 22 1 K lysine 3.7 22 2 L leucine 11.7 69 3 M methionine 1.9 11 1 N asparagine 4.9 29 2 P proline 4.1 24 2 Q glutamine 5.8 34 2 R arginine 5.1 30 2 S serine 10.9 64 3 T threonine 5.6 33 2 V valine 5.8 34 2 W tryptophan 1.2 7 1 Y tyrosine 4.6 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PCAF associated factor 65 beta isoform a TAF5L 0.533 PCAF associated factor 65 beta isoform b TAF5 0.298 TBP-associated factor 5 WDR69 0.096 WD repeat domain 69 WDR38 0.090 WD repeat domain 38 KATNB1 0.088 katanin p80 subunit B 1 WDR5 0.079 WD repeat domain 5 WDR5 0.079 WD repeat domain 5 WDR51B 0.079 WD repeat domain 51B PAFAH1B1 0.077 platelet-activating factor acetylhydrolase, isoform I... WDR5B 0.077 WD repeat domain 5B SNRNP40 0.075 WD repeat domain 57 (U5 snRNP specific) GNB4 0.074 guanine nucleotide-binding protein, beta-4 subunit [... WDR51A 0.074 WD repeat domain 51A isoform 2 WDR51A 0.074 WD repeat domain 51A isoform 1 WDR33 0.073 WD repeat domain 33 isoform 1 WDR51A 0.071 WD repeat domain 51A isoform 3 GNB1 0.069 guanine nucleotide-binding protein, beta-1 subunit [... TBL1X 0.069 transducin beta-like 1X isoform b TBL1X 0.069 transducin beta-like 1X isoform b TBL1X 0.069 transducin beta-like 1X isoform a TBL1X 0.069 transducin beta-like 1X isoform a TBL3 0.069 transducin beta-like 3 GNB2 0.068 guanine nucleotide-binding protein, beta-2 subunit [... APAF1 0.067 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.067 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.067 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.067 apoptotic peptidase activating factor 1 isoform a [Ho... NLE1 0.067 Notchless gene homolog isoform a TBL1Y 0.067 transducin beta-like 1Y Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.