Guide to the Human Genome
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Name: WDR61 Sequence: fasta or formatted (305aa) NCBI GI: 13376840
Description:

WD repeat domain 61

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         20           2
 C cysteine            1.0          3           1
 D aspartate           9.5         29           2
 E glutamate           3.3         10           1
 F phenylalanine       3.3         10           2
 G glycine             8.2         25           1
 H histidine           4.3         13           1
 I isoleucine          7.2         22           2
 K lysine              5.9         18           2
 L leucine             8.2         25           2
 M methionine          0.7          2           1
 N asparagine          3.3         10           1
 P proline             2.6          8           1
 Q glutamine           3.9         12           1
 R arginine            2.0          6           1
 S serine              9.8         30           4
 T threonine           5.9         18           1
 V valine              8.2         25           2
 W tryptophan          3.3         10           1
 Y tyrosine            3.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 61 
WDR69                 0.172   WD repeat domain 69 
WDR38                 0.161   WD repeat domain 38 
WDR5                  0.154   WD repeat domain 5 
WDR5                  0.154   WD repeat domain 5 
WDR5B                 0.137   WD repeat domain 5B 
PAFAH1B1              0.136   platelet-activating factor acetylhydrolase, isoform I...
WDR51B                0.132   WD repeat domain 51B 
WDR51A                0.131   WD repeat domain 51A isoform 2 
WDR51A                0.131   WD repeat domain 51A isoform 1 
WDR3                  0.131   WD repeat-containing protein 3 
TAF5                  0.129   TBP-associated factor 5 
KATNB1                0.127   katanin p80 subunit B 1 
GNB1                  0.127   guanine nucleotide-binding protein, beta-1 subunit [...
TAF5L                 0.127   PCAF associated factor 65 beta isoform a 
TBL3                  0.126   transducin beta-like 3 
PRPF4                 0.126   PRP4 pre-mRNA processing factor 4 homolog 
GNB4                  0.124   guanine nucleotide-binding protein, beta-4 subunit [...
GNB2                  0.124   guanine nucleotide-binding protein, beta-2 subunit [...
NLE1                  0.124   Notchless gene homolog isoform a 
FBXW7                 0.123   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.123   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.123   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR51A                0.121   WD repeat domain 51A isoform 3 
SMU1                  0.121   smu-1 suppressor of mec-8 and unc-52 homolog 
GNB3                  0.114   guanine nucleotide-binding protein, beta-3 subunit [H...
APAF1                 0.113   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.113   apoptotic peptidase activating factor 1 isoform a [Ho...
WDSUB1                0.113   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.113   WD repeat, sterile alpha motif and U-box domain con...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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