Guide to the Human Genome
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Name: WDR51A Sequence: fasta or formatted (369aa) NCBI GI: 239787764
Description:

WD repeat domain 51A isoform 3

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [407aa] WD repeat domain 51A isoform 1
alt prot [359aa] WD repeat domain 51A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         21           3
 C cysteine            2.2          8           1
 D aspartate           5.7         21           2
 E glutamate           3.8         14           1
 F phenylalanine       4.1         15           1
 G glycine             6.2         23           2
 H histidine           4.9         18           1
 I isoleucine          2.7         10           1
 K lysine              4.6         17           1
 L leucine             8.1         30           2
 M methionine          2.2          8           1
 N asparagine          2.4          9           1
 P proline             4.9         18           2
 Q glutamine           5.1         19           2
 R arginine            5.1         19           1
 S serine             10.3         38           2
 T threonine           8.1         30           2
 V valine             10.0         37           1
 W tryptophan          1.9          7           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 51A isoform 3 
WDR51A                1.000   WD repeat domain 51A isoform 1 
WDR51A                0.840   WD repeat domain 51A isoform 2 
WDR51B                0.490   WD repeat domain 51B 
WDR5B                 0.179   WD repeat domain 5B 
WDR5                  0.175   WD repeat domain 5 
WDR5                  0.175   WD repeat domain 5 
WDR69                 0.172   WD repeat domain 69 
PAFAH1B1              0.165   platelet-activating factor acetylhydrolase, isoform I...
KATNB1                0.142   katanin p80 subunit B 1 
TAF5                  0.138   TBP-associated factor 5 
SPAG16                0.137   sperm associated antigen 16 isoform 1 
WDR38                 0.137   WD repeat domain 38 
SNRNP40               0.135   WD repeat domain 57 (U5 snRNP specific) 
GNB2L1                0.127   guanine nucleotide binding protein (G protein), beta ...
FBXW7                 0.124   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.124   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.124   F-box and WD repeat domain containing 7 isoform 2 [H...
ATG16L1               0.124   APG16 autophagy 16-like isoform 1 
ATG16L1               0.124   APG16 autophagy 16-like isoform 2 
NLE1                  0.120   Notchless gene homolog isoform a 
WDR88                 0.119   PQQ repeat and WD repeat domain containing 
PRPF19                0.117   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TBL1Y                 0.117   transducin beta-like 1Y 
TBL1Y                 0.117   transducin beta-like 1Y 
TBL1Y                 0.117   transducin beta-like 1Y 
WDR47                 0.116   WD repeat domain 47 isoform 3 
WDR47                 0.116   WD repeat domain 47 isoform 1 
WDR47                 0.116   WD repeat domain 47 isoform 2 
COPA                  0.116   coatomer protein complex, subunit alpha isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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