SMU1 526

Name: SMU1	Sequence: fasta or formatted (513aa)		NCBI GI: 109948304
Description: smu-1 suppressor of mec-8 and unc-52 homolog		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 30 2 C cysteine 2.1 11 2 D aspartate 5.5 28 2 E glutamate 6.2 32 3 F phenylalanine 4.3 22 1 G glycine 6.4 33 2 H histidine 2.9 15 2 I isoleucine 6.2 32 2 K lysine 6.2 32 1 L leucine 9.7 50 2 M methionine 2.7 14 3 N asparagine 2.9 15 1 P proline 3.1 16 2 Q glutamine 5.3 27 2 R arginine 5.1 26 2 S serine 8.8 45 2 T threonine 6.4 33 2 V valine 6.6 34 2 W tryptophan 1.4 7 1 Y tyrosine 2.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 smu-1 suppressor of mec-8 and unc-52 homolog WDR5 0.120 WD repeat domain 5 WDR5 0.120 WD repeat domain 5 WDR5B 0.113 WD repeat domain 5B PAFAH1B1 0.076 platelet-activating factor acetylhydrolase, isoform I... KATNB1 0.076 katanin p80 subunit B 1 WDR51B 0.075 WD repeat domain 51B WDR51A 0.074 WD repeat domain 51A isoform 2 WDR51A 0.074 WD repeat domain 51A isoform 1 WDR69 0.073 WD repeat domain 69 WDR61 0.073 WD repeat domain 61 WDR86 0.068 WD repeat domain 86 TBL3 0.068 transducin beta-like 3 GNB2L1 0.066 guanine nucleotide binding protein (G protein), beta ... TAF5L 0.065 PCAF associated factor 65 beta isoform a SNRNP40 0.065 WD repeat domain 57 (U5 snRNP specific) APAF1 0.064 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.064 apoptotic peptidase activating factor 1 isoform a [Ho... WDR38 0.063 WD repeat domain 38 ATG16L1 0.062 APG16 autophagy 16-like isoform 1 ATG16L1 0.062 APG16 autophagy 16-like isoform 2 APAF1 0.062 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.062 apoptotic peptidase activating factor 1 isoform b [Ho... WDR51A 0.061 WD repeat domain 51A isoform 3 MORG1 0.060 mitogen-activated protein kinase organizer 1 MORG1 0.060 mitogen-activated protein kinase organizer 1 CDC40 0.057 cell division cycle 40 homolog TAF5 0.054 TBP-associated factor 5 STRAP 0.054 serine/threonine kinase receptor associated protein... WDR88 0.054 PQQ repeat and WD repeat domain containing Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.