Guide to the Human Genome
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Name: WDR69 Sequence: fasta or formatted (415aa) NCBI GI: 32189425
Description:

WD repeat domain 69

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         28           2
 C cysteine            3.4         14           1
 D aspartate           6.0         25           2
 E glutamate           5.5         23           2
 F phenylalanine       3.6         15           1
 G glycine             7.7         32           1
 H histidine           3.1         13           1
 I isoleucine          7.0         29           2
 K lysine              6.7         28           1
 L leucine            10.1         42           3
 M methionine          1.0          4           1
 N asparagine          4.6         19           2
 P proline             1.9          8           2
 Q glutamine           2.7         11           1
 R arginine            3.4         14           1
 S serine              8.2         34           2
 T threonine           9.4         39           2
 V valine              4.3         18           3
 W tryptophan          1.9          8           1
 Y tyrosine            2.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 69 
WDR5                  0.195   WD repeat domain 5 
WDR5                  0.195   WD repeat domain 5 
WDR5B                 0.195   WD repeat domain 5B 
FBXW7                 0.193   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.193   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.193   F-box and WD repeat domain containing 7 isoform 2 [H...
PAFAH1B1              0.168   platelet-activating factor acetylhydrolase, isoform I...
WDR38                 0.168   WD repeat domain 38 
WDR51A                0.166   WD repeat domain 51A isoform 2 
WDR51A                0.166   WD repeat domain 51A isoform 1 
PRPF4                 0.166   PRP4 pre-mRNA processing factor 4 homolog 
WDR51B                0.162   WD repeat domain 51B 
WDR86                 0.154   WD repeat domain 86 
WDR51A                0.153   WD repeat domain 51A isoform 3 
NLE1                  0.152   Notchless gene homolog isoform a 
WDR88                 0.145   PQQ repeat and WD repeat domain containing 
BTRC                  0.144   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.144   beta-transducin repeat containing protein isoform 1 ...
FBXW11                0.144   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.144   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.144   F-box and WD repeat domain containing 11 isoform B [...
SNRNP40               0.142   WD repeat domain 57 (U5 snRNP specific) 
SPAG16                0.139   sperm associated antigen 16 isoform 1 
TBL1XR1               0.138   transducin (beta)-like 1 X-linked receptor 1 
TBL1X                 0.137   transducin beta-like 1X isoform b 
TBL1X                 0.137   transducin beta-like 1X isoform b 
TBL1X                 0.137   transducin beta-like 1X isoform a 
TBL1X                 0.137   transducin beta-like 1X isoform a 
TAF5L                 0.136   PCAF associated factor 65 beta isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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