KATNB1 36480

Name: KATNB1	Sequence: fasta or formatted (655aa)		NCBI GI: 83779014
Description: katanin p80 subunit B 1		Referenced in: Cytoskeleton WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 48 2 C cysteine 2.6 17 2 D aspartate 6.1 40 2 E glutamate 5.5 36 2 F phenylalanine 2.6 17 1 G glycine 5.2 34 2 H histidine 2.1 14 1 I isoleucine 4.6 30 2 K lysine 5.2 34 1 L leucine 9.5 62 2 M methionine 1.7 11 2 N asparagine 3.7 24 1 P proline 7.2 47 2 Q glutamine 3.7 24 2 R arginine 6.6 43 2 S serine 9.5 62 2 T threonine 5.2 34 2 V valine 8.5 56 3 W tryptophan 1.7 11 1 Y tyrosine 1.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 katanin p80 subunit B 1 WDR51B 0.088 WD repeat domain 51B TAF5 0.086 TBP-associated factor 5 WDR69 0.082 WD repeat domain 69 PLRG1 0.081 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... WDR51A 0.080 WD repeat domain 51A isoform 3 WDR51A 0.080 WD repeat domain 51A isoform 2 WDR51A 0.080 WD repeat domain 51A isoform 1 SNRNP40 0.079 WD repeat domain 57 (U5 snRNP specific) TAF5L 0.079 PCAF associated factor 65 beta isoform a PAFAH1B1 0.078 platelet-activating factor acetylhydrolase, isoform I... WDR5 0.076 WD repeat domain 5 WDR5 0.076 WD repeat domain 5 WDR5B 0.076 WD repeat domain 5B FBXW7 0.074 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.074 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.074 F-box and WD repeat domain containing 7 isoform 2 [H... WDR38 0.072 WD repeat domain 38 PRPF19 0.070 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... PRPF4 0.069 PRP4 pre-mRNA processing factor 4 homolog FBXW11 0.065 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.065 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.065 F-box and WD repeat domain containing 11 isoform B [... SPAG16 0.064 sperm associated antigen 16 isoform 1 BTRC 0.062 beta-transducin repeat containing protein isoform 2 [... BTRC 0.062 beta-transducin repeat containing protein isoform 1 ... GNB2L1 0.061 guanine nucleotide binding protein (G protein), beta ... GNB5 0.060 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.060 guanine nucleotide-binding protein, beta-5 subunit i... WDR61 0.059 WD repeat domain 61 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.