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Search of human proteins with 113205075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113205075 amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 4 isoform a [Homo sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 795 0.0
gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 768 0.0
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 42 0.001
gi|110349719 titin isoform N2-A [Homo sapiens] 41 0.002
gi|224458301 family with sequence similarity 186, member A [Homo... 40 0.004
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 40 0.004
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 40 0.004
gi|116268091 PHD finger protein 23 [Homo sapiens] 39 0.006
gi|91208420 bassoon protein [Homo sapiens] 39 0.006
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 38 0.014
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 38 0.019
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 37 0.032
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 37 0.032
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 37 0.032
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens] 37 0.032
gi|89886237 cyclin I family, member 2 [Homo sapiens] 37 0.032
gi|24497513 homeobox A3 isoform a [Homo sapiens] 37 0.042
gi|13562112 homeobox A3 isoform a [Homo sapiens] 37 0.042
gi|118498364 dapper 1 isoform 2 [Homo sapiens] 37 0.042
gi|24158478 dapper 1 isoform 1 [Homo sapiens] 37 0.042
gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens] 37 0.042
gi|169204941 PREDICTED: similar to Nucleolar protein 5A [Homo sa... 36 0.055
gi|169205573 PREDICTED: similar to Nucleolar protein 5A [Homo sa... 36 0.055
gi|169203848 PREDICTED: hypothetical protein [Homo sapiens] 36 0.055
gi|4505257 moesin [Homo sapiens] 36 0.055
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 36 0.055
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 36 0.055
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 36 0.055
gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens] 36 0.072
gi|148839382 ring finger protein 169 [Homo sapiens] 36 0.072
>gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 4 isoform a [Homo sapiens]
Length = 408
Score = 795 bits (2053), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MRTDSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRR 60
MRTDSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRR
Sbjct: 1 MRTDSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRR 60
Query: 61 PSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAE 120
PSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAE
Sbjct: 61 PSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAE 120
Query: 121 EAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVF 180
EAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVF
Sbjct: 121 EAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVF 180
Query: 181 VEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCA 240
VEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCA
Sbjct: 181 VEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCA 240
Query: 241 VWNIVVIYVLAGDQLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAI 300
VWNIVVIYVLAGDQLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAI
Sbjct: 241 VWNIVVIYVLAGDQLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAI 300
Query: 301 RNFLALDPTALASFLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIV 360
RNFLALDPTALASFLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIV
Sbjct: 301 RNFLALDPTALASFLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIV 360
Query: 361 VNLVVALLVGLSWLFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS 408
VNLVVALLVGLSWLFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS
Sbjct: 361 VNLVVALLVGLSWLFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS 408
>gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 4 isoform b [Homo sapiens]
Length = 400
Score = 768 bits (1982), Expect = 0.0
Identities = 394/395 (99%), Positives = 395/395 (100%)
Query: 14 LRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK 73
+RPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK
Sbjct: 6 VRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK 65
Query: 74 EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 133
EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK
Sbjct: 66 EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 125
Query: 134 TQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRS 193
TQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRS
Sbjct: 126 TQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRS 185
Query: 194 ELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCAVWNIVVIYVLAGD 253
ELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCAVWNIVVIYVLAGD
Sbjct: 186 ELIKTTENIDVSMDVKPSWTTRDVALTVHRAFRMIGLFSHGFLAGCAVWNIVVIYVLAGD 245
Query: 254 QLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAIRNFLALDPTALAS 313
QLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAIRNFLALDPTALAS
Sbjct: 246 QLSNLSNLLQQYKTLAYPFQSLLYLLLALSTISAFDRIDFAKISVAIRNFLALDPTALAS 305
Query: 314 FLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIVVNLVVALLVGLSW 373
FLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIVVNLVVALLVGLSW
Sbjct: 306 FLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGIEEQILQPWIVVNLVVALLVGLSW 365
Query: 374 LFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS 408
LFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS
Sbjct: 366 LFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS 400
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 41.6 bits (96), Expect = 0.001
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 38/234 (16%)
Query: 3 TDSGARLEEGHLRPPRALP-PVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRP 61
+DS + E + P+ P V +Q P +P + P+ N A++S + ++
Sbjct: 171 SDSSSEDEPPKNQKPKITPVTVKAQTKAP-PKPARAAPKIANGKAASSSSSSSSSSSSDD 229
Query: 62 SEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSL-----------LRN 110
SE + + P+ V ++Q + P++ T+ T+K SSS ++N
Sbjct: 230 SEEEKAAAT-----PKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKN 284
Query: 111 ENG-------IDAEPAEEAV-IQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQ 162
+ G A P ++++ Q P++ +K QP E ++E ++ D ++E+
Sbjct: 285 KPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVE---SSEDSSDESDSSSEEEKKPPT 341
Query: 163 QSVFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTRD 216
++V + T P K E S +D SE D KP+ TT++
Sbjct: 342 KAVVSKAT-TKPPPAKKAAESSSDSSDSDSSE--------DDEAPSKPAGTTKN 386
Score = 28.9 bits (63), Expect = 8.8
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 53 LAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQ----KKTRLPLELETSSTQKKSSSSSLL 108
+A+ A ++ S + + E +E + P ++ K+ LP + K S SSS
Sbjct: 74 VAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLP---PGKAAAKASESSSSE 130
Query: 109 RNENGIDAEPAEEAVIQK---PRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSV 165
+ + D E ++ +QK P+ K K P + + ++ D D ++++ Q+
Sbjct: 131 ESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSD----SDSDSSSEDEPPKNQKPK 186
Query: 166 FTAPTGISQ----PVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKPSWTTR 215
T T +Q P K +AA S ++ + D S + K + T +
Sbjct: 187 ITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPK 240
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Query: 16 PPRALPPVPS--QDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK 73
PP +P VP ++ +P+ PKK+KP P + + E ++
Sbjct: 9974 PPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVP 10033
Query: 74 EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 133
E P+ PV ++ P ++E + L+ E P + V P + KK
Sbjct: 10034 EVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEK--KPTPVPKKVEAPPPKVPKK 10091
Query: 134 TQPAELQYA---NELGVEDEDIITDEQTTVEQQSV 165
+P + A E + +E+I+ +E+ E++ V
Sbjct: 10092 REPVPVPVALPQEEEVLFEEEIVPEEEVLPEEEEV 10126
Score = 28.9 bits (63), Expect = 8.8
Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 25/153 (16%)
Query: 17 PRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH- 75
P P +P P +P+ + K P +A P G + K KE
Sbjct: 11008 PEIKPAIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPV-TVPVVGKKAEAKAPKEEA 11066
Query: 76 --PEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 133
P+ P++ KKT P+E E + S +P +EA T +
Sbjct: 11067 AKPKGPIKGVPKKTPSPIEAERRKLRPGSGGE-----------KPPDEAPF------TYQ 11109
Query: 134 TQPAELQYANELGVEDEDIITDEQTTVEQQSVF 166
+ L++ E+ +DII E V ++F
Sbjct: 11110 LKAVPLKFVKEI----KDIILTESEFVGSSAIF 11138
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 40.0 bits (92), Expect = 0.004
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 15/152 (9%)
Query: 63 EGNEPSTKELKEHPEAPVQRRQKKTRLP---LELETSSTQKKSSSSSLLRNENGIDAEPA 119
E + +T + E E QR Q++ LP L+ TQK + LL ENG +
Sbjct: 891 EEQKQATPKQAEQEEKQKQRGQEEEELPKSSLQRLEEGTQKMKTQGLLLEKENGQMRQIQ 950
Query: 120 EEAVIQKPRRKTKKTQPAELQYANELGVED--EDIITDEQTTVE-------QQSVFTAPT 170
+EA P R+ +K + + E G+ED I T +Q ++ ++ V P
Sbjct: 951 KEAKHLGPHRRREKGKEKQ---KPERGLEDLERQIKTKDQMQMKETQPKELEKMVIQTPM 1007
Query: 171 GISQPVGKVFVEKSRRFQAADRSELIKTTENI 202
+S V + R ++ + +KT EN+
Sbjct: 1008 TLSPRWKSVLKDVQRSYEGKEFQRNLKTLENL 1039
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 40.0 bits (92), Expect = 0.004
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 22/195 (11%)
Query: 30 PLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRL 89
P S P KK P S + + + T R P N+ TK++ E E + + +
Sbjct: 69 PTSPPSSKKA----PPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQ- 123
Query: 90 PLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQK------PRRKTKKTQPAELQYAN 143
E+SS+ SSSSS +R A + +K + +TKK + +
Sbjct: 124 ----ESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVD 179
Query: 144 ELGV----EDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTT 199
E G D + T + +T + V T+P K + +D S+ T
Sbjct: 180 EAGSGLDNGDFKVTTPDTSTTQHNKVSTSP---KITTAKPINPRPSLPPNSDTSKETSLT 236
Query: 200 ENIDVSMDVKPSWTT 214
N + +++ K + TT
Sbjct: 237 VNKETTVETKETTTT 251
Score = 32.7 bits (73), Expect = 0.61
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 28/200 (14%)
Query: 34 PKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLEL 93
PK+ P T PA + +G A T + P+ P+T + AP + T+ P
Sbjct: 721 PKEPAPTTPKEPAPTTPKGTAPTTLKEPA----PTTPK----KPAPKELAPTTTKGP--- 769
Query: 94 ETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDII 153
TS+T K + ++ EPA +KP T +T P +
Sbjct: 770 -TSTTSDKPAPTTPKETAPTTPKEPA-PTTPKKPAPTTPETPPPTTSEVS------TPTT 821
Query: 154 TDEQTTVEQQSVFTAPTGISQPVGKVFVEKSR-------RFQAADRSELIKTTENIDVSM 206
T E TT+ + + P ++P K + + AA + E+ T ++
Sbjct: 822 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 881
Query: 207 DVK--PSWTTRDVALTVHRA 224
D++ P TT +T A
Sbjct: 882 DLRTTPETTTAAPKMTKETA 901
Score = 30.8 bits (68), Expect = 2.3
Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 16 PPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH 75
P P P+ + PK+ P T PA + + A T + P+ +TK
Sbjct: 334 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA---PTTTKSAPTT 390
Query: 76 PEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQ 135
P+ P KK E + T K + + + EPA + KK
Sbjct: 391 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPA 450
Query: 136 P 136
P
Sbjct: 451 P 451
Score = 29.6 bits (65), Expect = 5.1
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 11/162 (6%)
Query: 16 PPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKE--LK 73
P P P + + + P+K P T PA + E LA T P+ P+T E
Sbjct: 572 PKETAPTTPKK--LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPT----PTTPEEPAP 625
Query: 74 EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 133
P+A K+ E + T K + + + + +++P T K
Sbjct: 626 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 685
Query: 134 TQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQP 175
+PA + A E D+ + TAPT +P
Sbjct: 686 -KPAPKELAPTTTKEPTSTTCDKPAPTTPKG--TAPTTPKEP 724
Score = 28.9 bits (63), Expect = 8.8
Identities = 36/161 (22%), Positives = 58/161 (36%), Gaps = 12/161 (7%)
Query: 22 PVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKE-LKEHPEAPV 80
P ++ P + PKK P T PA + + T + P+ P+TKE P+ P
Sbjct: 388 PTTPKEPAPTT-PKKPAPTTPKEPAPTTPKEPTPTTPKEPA----PTTKEPAPTTPKEPA 442
Query: 81 QRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQ 140
KK E + T K + + + + + + TK+ P +
Sbjct: 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Query: 141 YANELGVEDEDIITDE--QTTVEQQSVFT----APTGISQP 175
A E T E TT ++ + T APT +P
Sbjct: 503 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP 543
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 40.0 bits (92), Expect = 0.004
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 22/195 (11%)
Query: 30 PLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRL 89
P S P KK P S + + + T R P N+ TK++ E E + + +
Sbjct: 110 PTSPPSSKKA----PPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQ- 164
Query: 90 PLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQK------PRRKTKKTQPAELQYAN 143
E+SS+ SSSSS +R A + +K + +TKK + +
Sbjct: 165 ----ESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVD 220
Query: 144 ELGV----EDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTT 199
E G D + T + +T + V T+P K + +D S+ T
Sbjct: 221 EAGSGLDNGDFKVTTPDTSTTQHNKVSTSP---KITTAKPINPRPSLPPNSDTSKETSLT 277
Query: 200 ENIDVSMDVKPSWTT 214
N + +++ K + TT
Sbjct: 278 VNKETTVETKETTTT 292
Score = 32.7 bits (73), Expect = 0.61
Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 28/200 (14%)
Query: 34 PKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLEL 93
PK+ P T PA + +G A T + P+ P+T + AP + T+ P
Sbjct: 762 PKEPAPTTPKEPAPTTPKGTAPTTLKEPA----PTTPK----KPAPKELAPTTTKGP--- 810
Query: 94 ETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDII 153
TS+T K + ++ EPA +KP T +T P +
Sbjct: 811 -TSTTSDKPAPTTPKETAPTTPKEPA-PTTPKKPAPTTPETPPPTTSEVS------TPTT 862
Query: 154 TDEQTTVEQQSVFTAPTGISQPVGKVFVEKSR-------RFQAADRSELIKTTENIDVSM 206
T E TT+ + + P ++P K + + AA + E+ T ++
Sbjct: 863 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 922
Query: 207 DVK--PSWTTRDVALTVHRA 224
D++ P TT +T A
Sbjct: 923 DLRTTPETTTAAPKMTKETA 942
Score = 30.8 bits (68), Expect = 2.3
Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 16 PPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH 75
P P P+ + PK+ P T PA + + A T + P+ +TK
Sbjct: 375 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPA---PTTTKSAPTT 431
Query: 76 PEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQ 135
P+ P KK E + T K + + + EPA + KK
Sbjct: 432 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPA 491
Query: 136 P 136
P
Sbjct: 492 P 492
Score = 29.6 bits (65), Expect = 5.1
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 11/162 (6%)
Query: 16 PPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKE--LK 73
P P P + + + P+K P T PA + E LA T P+ P+T E
Sbjct: 613 PKETAPTTPKK--LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPT----PTTPEEPAP 666
Query: 74 EHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKK 133
P+A K+ E + T K + + + + +++P T K
Sbjct: 667 TTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK 726
Query: 134 TQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQP 175
+PA + A E D+ + TAPT +P
Sbjct: 727 -KPAPKELAPTTTKEPTSTTCDKPAPTTPKG--TAPTTPKEP 765
Score = 28.9 bits (63), Expect = 8.8
Identities = 36/161 (22%), Positives = 58/161 (36%), Gaps = 12/161 (7%)
Query: 22 PVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKE-LKEHPEAPV 80
P ++ P + PKK P T PA + + T + P+ P+TKE P+ P
Sbjct: 429 PTTPKEPAPTT-PKKPAPTTPKEPAPTTPKEPTPTTPKEPA----PTTKEPAPTTPKEPA 483
Query: 81 QRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQ 140
KK E + T K + + + + + + TK+ P +
Sbjct: 484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Query: 141 YANELGVEDEDIITDE--QTTVEQQSVFT----APTGISQP 175
A E T E TT ++ + T APT +P
Sbjct: 544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP 584
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 39.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 15 RPPRALPPVP-SQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK 73
RPP AL PVP SQ D LS P +KK R + G RP+ G+ +K
Sbjct: 159 RPPAALTPVPLSQGD--LSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIK 216
Query: 74 EHPEAPVQRRQKKTRLP 90
+ + +++ ++ RLP
Sbjct: 217 KSKKRKLKKAERGDRLP 233
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 39.3 bits (90), Expect = 0.006
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 13/153 (8%)
Query: 8 RLEEGHLRPPRALPPVPSQDDIPLSRPKKKK---PRTKNTPASASLEGLAQTAGRRPSEG 64
RL EG L P LPP SQ P+ P + P + P +GL Q +G P++
Sbjct: 519 RLLEGSLGEPTPLPPPTSQQP-PVGAPHRASGTSPLKQKGP-----QGLGQPSGPLPAKA 572
Query: 65 NEPSTK----ELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAE 120
+ STK K P+A R + ++ P ++ T+ + + + + PA
Sbjct: 573 SPLSTKASPLPSKASPQAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPAT 632
Query: 121 EAVIQKPRRKTKKTQPAELQYANELGVEDEDII 153
V RR T + G E ED++
Sbjct: 633 PKVKSGVRRAEPATPVVKAVPEAPKGGEAEDLV 665
Score = 32.0 bits (71), Expect = 1.0
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 4/164 (2%)
Query: 58 GRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAE 117
G PS EP E++ +P R + + L T S +S +SL E D+
Sbjct: 951 GPDPSLDREPEL-EMESLTGSPEDRSRGEHSSTLPASTPSYTSGTSPTSLSSLEEDSDSS 1009
Query: 118 PAEEAVIQ--KPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQP 175
P+ ++ K +RK + L E E+E++ +E+ EQ+ + +
Sbjct: 1010 PSRRQRLEEAKQQRKARHRSHGPLLPTIEDSSEEEELREEEELLREQEKMREVEQQRIRS 1069
Query: 176 VGKVFVEKSRRFQAADRSELIKT-TENIDVSMDVKPSWTTRDVA 218
+ +A R E KT N+ D P+ R A
Sbjct: 1070 TARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPTEELRQAA 1113
Score = 29.6 bits (65), Expect = 5.1
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 16 PPRALPPVPS--QDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELK 73
P R PV + ++ +P + P K PA A L G A P G+ ++
Sbjct: 2296 PSRPEMPVGAAREEPLPTTTPAAIK-EAAGAPAPAPLAGQKPPADAAPGGGSGALSRPGF 2354
Query: 74 EHPEAPVQRRQKKTR---LPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRK 130
E EA + RQ+K + L LE E +K LR + ++ E E +Q+ R +
Sbjct: 2355 EKEEASQEERQRKQQEQLLQLERERVELEKLRQ----LRLQEELERERVE---LQRHREE 2407
Query: 131 TKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVF 166
+ ELQ EL ++ +Q E+Q+ F
Sbjct: 2408 EQLLVQRELQ---ELQTIKHHVLQQQQE--ERQAQF 2438
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 38.1 bits (87), Expect = 0.014
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 6 GARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSE-G 64
G LEE L+PP+ P ++ R +K RT+ P A LE L + + E G
Sbjct: 222 GESLEETDLQPPKMTKPETPEET---QRESTEKKRTE-PPEQARLEFLEKEPRKSSEEAG 277
Query: 65 NEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVI 124
EP + E PE E++ +T++K + + +
Sbjct: 278 LEPPEETQPEVPE--------------EMQRKATEEKGTE---------LPERTKPDFPD 314
Query: 125 QKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSV 165
KPR+ T + P L+ E+E T+E+T +EQ +
Sbjct: 315 HKPRKSTDENVPEPLEEIKLEFPEEESRKTNEETILEQSEM 355
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 37.7 bits (86), Expect = 0.019
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 26/159 (16%)
Query: 2 RTDSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAG--- 58
R S RL + H+R A P R +KKK R ++T ASA EG Q
Sbjct: 822 RLGSETRLPQ-HIREATAAPHG--------KRKRKKKKRPEDTAASALQEGQTQRQPGSP 872
Query: 59 --RRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDA 116
RR + P+ + +E P Q+ + SS +++ + L E G+
Sbjct: 873 MYRREGQAQLPAVRR-QEDGTQPQVNGQQVGCVTDGHHASSRKRRRKGAEGLGEEGGLHQ 931
Query: 117 EPAE-----------EAVIQKPRRKTKKTQPAELQYANE 144
+P EA+ + PR+K KK + E Q A E
Sbjct: 932 DPLRHSCSPMGDGDPEAMEESPRKKKKKKRKQETQRAVE 970
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.032
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 54 AQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENG 113
A ++ +E EP +E +E P ++RQ + ELE +++ +++ +
Sbjct: 1255 ADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQ-ELEEPEPEEEEDAAAETAQNDD 1313
Query: 114 IDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQ 162
DA+ ++ ++ ++K + QP E GV++ + + Q + E+
Sbjct: 1314 HDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREK 1362
Score = 30.0 bits (66), Expect = 3.9
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 4 DSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSE 63
DS LEE P + + + + + + + S +G RR SE
Sbjct: 883 DSKLLLEETSSAPQEQYGECGEKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSE 942
Query: 64 GNEPSTKELKEHPEA-PVQRRQKKTRLPLEL-ETSSTQKKSSSSSLLRNENGIDAEPAEE 121
G EP +LK+ PEA + + RLP E + S S E +
Sbjct: 943 GVEPWRGQLKKSPEALKCRLTEGSERLPRRYSEGDRAVLRGFSESSEEEEEPESPRSSSP 1002
Query: 122 AVIQKPRRKTKK 133
++ KP K KK
Sbjct: 1003 PILTKPTLKRKK 1014
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.032
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 54 AQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENG 113
A ++ +E EP +E +E P ++RQ + ELE +++ +++ +
Sbjct: 1255 ADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQ-ELEEPEPEEEEDAAAETAQNDD 1313
Query: 114 IDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQ 162
DA+ ++ ++ ++K + QP E GV++ + + Q + E+
Sbjct: 1314 HDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREK 1362
Score = 30.0 bits (66), Expect = 3.9
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 4 DSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSE 63
DS LEE P + + + + + + + S +G RR SE
Sbjct: 883 DSKLLLEETSSAPQEQYGECGEKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSE 942
Query: 64 GNEPSTKELKEHPEA-PVQRRQKKTRLPLEL-ETSSTQKKSSSSSLLRNENGIDAEPAEE 121
G EP +LK+ PEA + + RLP E + S S E +
Sbjct: 943 GVEPWRGQLKKSPEALKCRLTEGSERLPRRYSEGDRAVLRGFSESSEEEEEPESPRSSSP 1002
Query: 122 AVIQKPRRKTKK 133
++ KP K KK
Sbjct: 1003 PILTKPTLKRKK 1014
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.032
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 54 AQTAGRRPSEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENG 113
A ++ +E EP +E +E P ++RQ + ELE +++ +++ +
Sbjct: 1255 ADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQ-ELEEPEPEEEEDAAAETAQNDD 1313
Query: 114 IDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQ 162
DA+ ++ ++ ++K + QP E GV++ + + Q + E+
Sbjct: 1314 HDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREK 1362
Score = 30.0 bits (66), Expect = 3.9
Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 4 DSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSE 63
DS LEE P + + + + + + + S +G RR SE
Sbjct: 883 DSKLLLEETSSAPQEQYGECGEKSEATQEQYTESEEQLVASEEQPSQDGKPDLPKRRLSE 942
Query: 64 GNEPSTKELKEHPEA-PVQRRQKKTRLPLEL-ETSSTQKKSSSSSLLRNENGIDAEPAEE 121
G EP +LK+ PEA + + RLP E + S S E +
Sbjct: 943 GVEPWRGQLKKSPEALKCRLTEGSERLPRRYSEGDRAVLRGFSESSEEEEEPESPRSSSP 1002
Query: 122 AVIQKPRRKTKK 133
++ KP K KK
Sbjct: 1003 PILTKPTLKRKK 1014
>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
Length = 860
Score = 37.0 bits (84), Expect = 0.032
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 36/189 (19%)
Query: 5 SGARLEEGHLRPPRALP-PVPSQDDIPLSRPKKKKPRTKNTPASASLE-GLAQTAGRRPS 62
SGA GH + P PS+D P +P+ + + K T A+A A TA R
Sbjct: 114 SGAEEASGHRQDTEERARPAPSRDPSPPRKPRPSRVKAKATAATAKTRPSAAATAAARKR 173
Query: 63 ---EGNEPSTKELKEHPEA-PVQRRQKK---TRLPLEL---------------------E 94
NE +E+++ + +R+KK + +PL +
Sbjct: 174 ALLAANEEEDREIRKLERCLGLNKRKKKDGSSSVPLSFARDGLDYILGALESGKNSGLYD 233
Query: 95 TSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQYANELGVEDEDIIT 154
+S +++ + +L ++ D++ E + K KK Q AE Q ED+D T
Sbjct: 234 SSGEEEEDAGQTLPESDLESDSQDESEEEEEGDVEKEKKAQEAEAQ------SEDDDEDT 287
Query: 155 DEQTTVEQQ 163
+E+ E++
Sbjct: 288 EEEQGEEKE 296
>gi|89886237 cyclin I family, member 2 [Homo sapiens]
Length = 369
Score = 37.0 bits (84), Expect = 0.032
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 6 GARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGN 65
GA LEE L P LPP P + +P S + + P T+ P +ASL + RP G
Sbjct: 27 GAGLEETALGVP--LPPSPGEAPLPRSN-RSRCPGTRQ-PGAASLHAASAAVPVRPRRGT 82
Query: 66 EPSTKELKEHPEAPVQ---RRQKKTRLPLELETSSTQKK 101
P+ K P A + R ++R P LE +++
Sbjct: 83 APAGKTADAVPAAAPEQAPRPAPQSRKPRNLEGDLDERR 121
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.042
Identities = 35/128 (27%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 13 HLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKEL 72
H PP+A PP P Q P +P P P+SAS Q A P+ N + L
Sbjct: 91 HPPPPQAAPPAP-QPPQPAPQPPAPTPAAPPPPSSAS---PPQNASNNPTPANAAKSPLL 146
Query: 73 KEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTK 132
A K P E+ K+ +SSS D P +A ++ R
Sbjct: 147 NSPTVA-------KQIFPWMKESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYT 199
Query: 133 KTQPAELQ 140
Q EL+
Sbjct: 200 SAQLVELE 207
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 36.6 bits (83), Expect = 0.042
Identities = 35/128 (27%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 13 HLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKEL 72
H PP+A PP P Q P +P P P+SAS Q A P+ N + L
Sbjct: 91 HPPPPQAAPPAP-QPPQPAPQPPAPTPAAPPPPSSAS---PPQNASNNPTPANAAKSPLL 146
Query: 73 KEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTK 132
A K P E+ K+ +SSS D P +A ++ R
Sbjct: 147 NSPTVA-------KQIFPWMKESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYT 199
Query: 133 KTQPAELQ 140
Q EL+
Sbjct: 200 SAQLVELE 207
>gi|118498364 dapper 1 isoform 2 [Homo sapiens]
Length = 799
Score = 36.6 bits (83), Expect = 0.042
Identities = 55/230 (23%), Positives = 86/230 (37%), Gaps = 43/230 (18%)
Query: 5 SGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPAS---ASLEGLAQTAGRRP 61
S LEE HL + +P Q + L R + KN+ +L+GL
Sbjct: 508 SSQSLEEAHLVKAQFIPG--QQPSVRLHRGHRNMGVVKNSSLKHRGPALQGL-------- 557
Query: 62 SEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRN---ENGIDAEP 118
E P+ +E + KK R P +L+T+ KK+SS E G+ P
Sbjct: 558 -ENGLPTVRE-------KTRAGSKKCRFPDDLDTNKKLKKASSKGRKSGGGPEAGVPGRP 609
Query: 119 A--------------EEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQS 164
A EAV+ KP K K+T + + E+ E E + + E
Sbjct: 610 AGGGHRAGSRAHGHGREAVVAKP--KHKRTDYRRWKSSAEISYE-EALRRARRGRRENVG 666
Query: 165 VFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKPSWTT 214
++ AP + +V + A S T +D S D + ++TT
Sbjct: 667 LYPAPVPLPYASPYAYVASDSEYSAECESLFHSTV--VDTSEDEQSNYTT 714
>gi|24158478 dapper 1 isoform 1 [Homo sapiens]
Length = 836
Score = 36.6 bits (83), Expect = 0.042
Identities = 55/230 (23%), Positives = 86/230 (37%), Gaps = 43/230 (18%)
Query: 5 SGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPAS---ASLEGLAQTAGRRP 61
S LEE HL + +P Q + L R + KN+ +L+GL
Sbjct: 545 SSQSLEEAHLVKAQFIPG--QQPSVRLHRGHRNMGVVKNSSLKHRGPALQGL-------- 594
Query: 62 SEGNEPSTKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRN---ENGIDAEP 118
E P+ +E + KK R P +L+T+ KK+SS E G+ P
Sbjct: 595 -ENGLPTVRE-------KTRAGSKKCRFPDDLDTNKKLKKASSKGRKSGGGPEAGVPGRP 646
Query: 119 A--------------EEAVIQKPRRKTKKTQPAELQYANELGVEDEDIITDEQTTVEQQS 164
A EAV+ KP K K+T + + E+ E E + + E
Sbjct: 647 AGGGHRAGSRAHGHGREAVVAKP--KHKRTDYRRWKSSAEISYE-EALRRARRGRRENVG 703
Query: 165 VFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKPSWTT 214
++ AP + +V + A S T +D S D + ++TT
Sbjct: 704 LYPAPVPLPYASPYAYVASDSEYSAECESLFHSTV--VDTSEDEQSNYTT 751
>gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens]
Length = 810
Score = 36.6 bits (83), Expect = 0.042
Identities = 46/194 (23%), Positives = 74/194 (38%), Gaps = 20/194 (10%)
Query: 30 PLSRPKKKKPRTKNTPASASLE---------GLAQTAGRRPSEGNEPSTKELKEHPEAPV 80
P+ P+K+ RT + S + L + G+R S LK +
Sbjct: 248 PVPGPEKENVRTVVRTVTLSTKQGEEPLVRLSLTERLGKRKFSAGGDSDPPLKR---SLA 304
Query: 81 QRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRR----KTKKTQP 136
QR KK P E T KK+ S L+ G+ A+P E K + K +
Sbjct: 305 QRLGKKVEAP-ETNIDKTPKKAQVSKSLKERLGMSADPDNEDATDKVNKVGEIHVKTLEE 363
Query: 137 AELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGIS---QPVGKVFVEKSRRFQAADRS 193
L+ A++ E + + E + S A + + + +V EK R Q A+R
Sbjct: 364 ILLERASQKRGELQTKLKTEGPSKTDDSTSGARSSSTIRIKTFSEVLAEKKHRQQEAERQ 423
Query: 194 ELIKTTENIDVSMD 207
+ K T I + +D
Sbjct: 424 KSKKDTTCIKLKID 437
>gi|169204941 PREDICTED: similar to Nucleolar protein 5A [Homo
sapiens]
Length = 166
Score = 36.2 bits (82), Expect = 0.055
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 17 PRALPPVPSQD-DIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH 75
P+ +P ++D I S+PKKKK +K S+ LE A + + + P T+ + +
Sbjct: 60 PQEVPQEKTEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSLLKRKKSSPKTETVNDP 119
Query: 76 PEAPVQR-RQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEE 121
EA + +KKT+ E SS ++++ S + E E+
Sbjct: 120 EEAGNRSVSKKKTKFSKEEPVSSGPEEAAGSKSSSKKKMFHKEAQED 166
>gi|169205573 PREDICTED: similar to Nucleolar protein 5A [Homo
sapiens]
Length = 166
Score = 36.2 bits (82), Expect = 0.055
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 17 PRALPPVPSQD-DIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH 75
P+ +P ++D I S+PKKKK +K S+ LE A + + + P T+ + +
Sbjct: 60 PQEVPQEKTEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSLLKRKKSSPKTETVNDP 119
Query: 76 PEAPVQR-RQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEE 121
EA + +KKT+ E SS ++++ S + E E+
Sbjct: 120 EEAGNRSVSKKKTKFSKEEPVSSGPEEAAGSKSSSKKKMFHKEAQED 166
>gi|169203848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 166
Score = 36.2 bits (82), Expect = 0.055
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 17 PRALPPVPSQD-DIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEH 75
P+ +P ++D I S+PKKKK +K S+ LE A + + + P T+ + +
Sbjct: 60 PQEVPQEKTEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSLLKRKKSSPKTETVNDP 119
Query: 76 PEAPVQR-RQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEE 121
EA + +KKT+ E SS ++++ S + E E+
Sbjct: 120 EEAGNRSVSKKKTKFSKEEPVSSGPEEAAGSKSSSKKKMFHKEAQED 166
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 36.2 bits (82), Expect = 0.055
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 70 KELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRR 129
K+++E + Q +++TR LELE + +S + L + +AE A+EA++Q R
Sbjct: 352 KQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQ--EAEEAKEALLQASRD 409
Query: 130 KTKKTQPAELQYA 142
+ K + L+ A
Sbjct: 410 QKKTQEQLALEMA 422
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 36.2 bits (82), Expect = 0.055
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 22/148 (14%)
Query: 2 RTDSGARLEEGHLRPPRA-LPPVPSQ------DDIPLSRPKKKKPRTKNTPASASLEGLA 54
+ D + E ++P +P P + +D+P S K +P+ N P S S + +
Sbjct: 33 KQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS-SAKPIQ 91
Query: 55 QTAGRRPSEGNEPSTKELKEHPEAPVQRRQ-KKTRLPLELETSSTQKKSSSSSLLRNENG 113
G P +PS + + P+AP + Q KK LP KSS ++ E
Sbjct: 92 PKLGNIPKASVKPSQPKEGDIPKAPEETIQSKKEDLP----------KSSEEAIQPKEGD 141
Query: 114 I---DAEPAEEAVIQKPRRKTKKTQPAE 138
I A+P + + + K +QP E
Sbjct: 142 IPKSSAKPIQPKLGNIAKTSVKPSQPKE 169
Score = 30.8 bits (68), Expect = 2.3
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 24 PSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAG---RRPSEGNEPSTKELKEHPEAPV 80
P + DIP S K +P+ N P AS++ G + P E +P +L + E +
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIP-KASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAI 240
Query: 81 QRRQ-------------KKTRLPLELETSSTQKK----SSSSSLLRNENGIDAEPAEEAV 123
Q ++ K+ +P LE + K+ S ++ + G + EEA+
Sbjct: 241 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 124 IQK----PRRKTKKTQPAELQYANEL----GVEDEDIITDEQTTV---EQQSVFTAPTGI 172
K P+ + QP E L ++ DI + T+ E S +
Sbjct: 301 QPKEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEAT 360
Query: 173 SQPVGKVF--VEKSRRFQAADRSELIKTTENIDVSM 206
G + E++ F D+ ++I + E+ + S+
Sbjct: 361 PSKEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 396
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 36.2 bits (82), Expect = 0.055
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 22/148 (14%)
Query: 2 RTDSGARLEEGHLRPPRA-LPPVPSQ------DDIPLSRPKKKKPRTKNTPASASLEGLA 54
+ D + E ++P +P P + +D+P S K +P+ N P S S + +
Sbjct: 100 KQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS-SAKPIQ 158
Query: 55 QTAGRRPSEGNEPSTKELKEHPEAPVQRRQ-KKTRLPLELETSSTQKKSSSSSLLRNENG 113
G P +PS + + P+AP + Q KK LP KSS ++ E
Sbjct: 159 PKLGNIPKASVKPSQPKEGDIPKAPEETIQSKKEDLP----------KSSEEAIQPKEGD 208
Query: 114 I---DAEPAEEAVIQKPRRKTKKTQPAE 138
I A+P + + + K +QP E
Sbjct: 209 IPKSSAKPIQPKLGNIAKTSVKPSQPKE 236
Score = 30.8 bits (68), Expect = 2.3
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 24 PSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAG---RRPSEGNEPSTKELKEHPEAPV 80
P + DIP S K +P+ N P AS++ G + P E +P +L + E +
Sbjct: 249 PKEGDIPKSSAKPIQPKLGNIP-KASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAI 307
Query: 81 QRRQ-------------KKTRLPLELETSSTQKK----SSSSSLLRNENGIDAEPAEEAV 123
Q ++ K+ +P LE + K+ S ++ + G + EEA+
Sbjct: 308 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 367
Query: 124 IQK----PRRKTKKTQPAELQYANEL----GVEDEDIITDEQTTV---EQQSVFTAPTGI 172
K P+ + QP E L ++ DI + T+ E S +
Sbjct: 368 QPKEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEAT 427
Query: 173 SQPVGKVF--VEKSRRFQAADRSELIKTTENIDVSM 206
G + E++ F D+ ++I + E+ + S+
Sbjct: 428 PSKEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 463
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 36.2 bits (82), Expect = 0.055
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 22/148 (14%)
Query: 2 RTDSGARLEEGHLRPPRA-LPPVPSQ------DDIPLSRPKKKKPRTKNTPASASLEGLA 54
+ D + E ++P +P P + +D+P S K +P+ N P S S + +
Sbjct: 33 KQDDSPKSSEETIQPKEGDIPKAPEETIQSKKEDLPKSSEKAIQPKESNIPKS-SAKPIQ 91
Query: 55 QTAGRRPSEGNEPSTKELKEHPEAPVQRRQ-KKTRLPLELETSSTQKKSSSSSLLRNENG 113
G P +PS + + P+AP + Q KK LP KSS ++ E
Sbjct: 92 PKLGNIPKASVKPSQPKEGDIPKAPEETIQSKKEDLP----------KSSEEAIQPKEGD 141
Query: 114 I---DAEPAEEAVIQKPRRKTKKTQPAE 138
I A+P + + + K +QP E
Sbjct: 142 IPKSSAKPIQPKLGNIAKTSVKPSQPKE 169
Score = 30.8 bits (68), Expect = 2.3
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 34/216 (15%)
Query: 24 PSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAG---RRPSEGNEPSTKELKEHPEAPV 80
P + DIP S K +P+ N P AS++ G + P E +P +L + E +
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIP-KASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAI 240
Query: 81 QRRQ-------------KKTRLPLELETSSTQKK----SSSSSLLRNENGIDAEPAEEAV 123
Q ++ K+ +P LE + K+ S ++ + G + EEA+
Sbjct: 241 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 124 IQK----PRRKTKKTQPAELQYANEL----GVEDEDIITDEQTTV---EQQSVFTAPTGI 172
K P+ + QP E L ++ DI + T+ E S +
Sbjct: 301 QPKEGDIPKSPKQAIQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKEDDSPKSLEEAT 360
Query: 173 SQPVGKVF--VEKSRRFQAADRSELIKTTENIDVSM 206
G + E++ F D+ ++I + E+ + S+
Sbjct: 361 PSKEGDILKPEEETMEFPEGDKVKVILSKEDFEASL 396
>gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]
Length = 1531
Score = 35.8 bits (81), Expect = 0.072
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 15 RPPRALPPVPSQDDIPLSRPKKKKPRTKNTPAS-----ASLEGLAQTAGRRPSEGNEPST 69
R R +P + + + KKK + +NT S LEGL Q ++ + EP T
Sbjct: 1215 RGQRVIPRITIEMKAEAEKKNKKKIKNENTEGSPQEDGVELEGLKQRLEKK--QKREPGT 1272
Query: 70 KELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRR 129
K K+ A ++ K R P S S +E+ D P E +PRR
Sbjct: 1273 KTKKQTTLAFKPIKKGKKRNPW---------SDSESDRSSDESNFDVPPRE----TEPRR 1319
Query: 130 KTKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQA 189
KT ++ +L DED ++ T ++ V P+ S P K + S + +
Sbjct: 1320 AATKT-----KFTMDLD-SDEDFSDFDEKTDDEDFV---PSDASPPKTKTSPKLSNK-EL 1369
Query: 190 ADRSELIKTTENIDVSMDV 208
+ ++ E DV V
Sbjct: 1370 KPQKSVVSDLEADDVKGSV 1388
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 35.8 bits (81), Expect = 0.072
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 25 SQDDIP-LSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTKELKEHPEAPVQRR 83
S++ +P L R +K+ +TK+ + SL+ L QT+G +P +E+++ + + R
Sbjct: 611 SEEPLPSLRRGRKRHCKTKHLEQNGSLKKLRQTSGEVGLAPTDPVLREMEQKLQQEEEDR 670
Query: 84 QKKTRLPL----ELETSSTQKKSSSSSLLRNEN 112
Q +L E T S +K S LLR+ N
Sbjct: 671 QLALQLQRMFDNERRTVSRRKGSVDQYLLRSSN 703
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,344,725
Number of Sequences: 37866
Number of extensions: 699647
Number of successful extensions: 3666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 3298
Number of HSP's gapped (non-prelim): 590
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.