Guide to the Human Genome
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Name: FAM186A Sequence: fasta or formatted (2351aa) NCBI GI: 224458301
Description:

family with sequence similarity 186, member A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6        154           2
 C cysteine            0.3          7           1
 D aspartate           2.8         65           2
 E glutamate           8.1        191           4
 F phenylalanine       2.0         46           2
 G glycine             4.6        109           2
 H histidine           1.4         33           3
 I isoleucine          6.3        149           2
 K lysine              8.1        191           3
 L leucine            11.2        264           3
 M methionine          2.3         54           3
 N asparagine          2.1         50           2
 P proline             8.3        195           3
 Q glutamine          11.8        277           2
 R arginine            3.3         78           3
 S serine              7.5        177           3
 T threonine           7.6        178           2
 V valine              3.2         76           2
 W tryptophan          1.0         24           1
 Y tyrosine            1.4         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 186, member A [Homo... 
FAM186B               0.029   hypothetical protein LOC84070 
LOC647546             0.016   PREDICTED: hypothetical protein 
LOC283685             0.015   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.015   trichohyalin 
LOC100294335          0.015   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.015   PREDICTED: similar to c114 SLIT-like testicular pro...
LRRC37A               0.015   leucine rich repeat containing 37A 
MAGEE1                0.015   melanoma antigen family E, 1 
LRRC37A3              0.014   leucine rich repeat containing 37, member A3 
LOC100288229          0.014   PREDICTED: hypothetical protein XP_002343606 
LOC440243             0.014   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.014   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LRRC37A2              0.014   c114 SLIT-like testicular protein 
LOC283767             0.014   golgi autoantigen, golgin subfamily a-like 
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
CENPE                 0.014   centromere protein E 
MYH8                  0.013   myosin, heavy chain 8, skeletal muscle, perinatal [...
EP400                 0.013   E1A binding protein p400 
EEA1                  0.013   early endosome antigen 1, 162kD 
WDR87                 0.013   NYD-SP11 protein 
MYH13                 0.013   myosin, heavy polypeptide 13, skeletal muscle [Homo...
LOC645202             0.013   PREDICTED: hypothetical protein LOC645202 
LOC100133758          0.012   PREDICTED: hypothetical protein, partial 
MYH7                  0.012   myosin, heavy chain 7, cardiac muscle, beta 
ERC1                  0.012   RAB6-interacting protein 2 isoform epsilon 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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