Guide to the Human Genome
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Name: CCNI2 Sequence: fasta or formatted (369aa) NCBI GI: 89886237
Description:

cyclin I family, member 2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         36           3
 C cysteine            2.4          9           2
 D aspartate           3.8         14           1
 E glutamate           6.0         22           4
 F phenylalanine       3.0         11           1
 G glycine             5.7         21           2
 H histidine           2.7         10           1
 I isoleucine          3.0         11           2
 K lysine              3.5         13           2
 L leucine            14.1         52           2
 M methionine          1.6          6           1
 N asparagine          2.4          9           1
 P proline             8.7         32           2
 Q glutamine           6.0         22           2
 R arginine            6.8         25           2
 S serine              7.9         29           3
 T threonine           4.3         16           1
 V valine              5.4         20           2
 W tryptophan          1.4          5           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin I family, member 2 
CCNI                  0.237   cyclin I 
CCNG2                 0.089   cyclin G2 
CCNG1                 0.082   cyclin G1 
CCNG1                 0.082   cyclin G1 
CCNE2                 0.047   cyclin E2 
CCNB2                 0.039   cyclin B2 
CCNE1                 0.036   cyclin E1 isoform 1 
CCNE1                 0.036   cyclin E1 isoform 2 
CCNB1                 0.035   cyclin B1 
CCND2                 0.035   cyclin D2 
CCNA2                 0.033   cyclin A 
CCNB3                 0.033   cyclin B3 isoform 3 
CCND1                 0.032   cyclin D1 
CCNA1                 0.028   cyclin A1 isoform c 
CCNA1                 0.028   cyclin A1 isoform c 
CCNA1                 0.028   cyclin A1 isoform b 
CCNA1                 0.028   cyclin A1 isoform a 
LOC100134017          0.026   PREDICTED: hypothetical protein 
ROBO3                 0.026   roundabout, axon guidance receptor, homolog 3 
SAMD1                 0.025   sterile alpha motif domain containing 1 
CCND3                 0.025   cyclin D3 isoform 2 
SALL3                 0.025   sal-like 3 
CCNJ                  0.025   cyclin J isoform 3 
CCNJ                  0.025   cyclin J isoform 1 
CCNJ                  0.025   cyclin J isoform 2 
FOXL2                 0.024   forkhead box L2 
RANBP9                0.024   RAN binding protein 9 
TAF4                  0.024   TBP-associated factor 4 
SFPQ                  0.024   splicing factor proline/glutamine rich (polypyrimidin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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