Guide to the Human Genome
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Name: C14orf174 Sequence: fasta or formatted (674aa) NCBI GI: 58082089
Description:

hypothetical protein LOC161394

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         21           2
 C cysteine            0.6          4           1
 D aspartate           4.9         33           2
 E glutamate          20.9        141           3
 F phenylalanine       2.8         19           2
 G glycine             4.2         28           2
 H histidine           1.9         13           1
 I isoleucine          3.3         22           2
 K lysine              7.9         53           2
 L leucine             8.0         54           2
 M methionine          1.8         12           2
 N asparagine          2.5         17           1
 P proline            10.4         70           2
 Q glutamine           4.5         30           1
 R arginine            3.9         26           1
 S serine              7.1         48           2
 T threonine           6.5         44           1
 V valine              3.7         25           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC161394 
TRDN                  0.049   triadin 
RP1L1                 0.046   retinitis pigmentosa 1-like 1 
NEFH                  0.043   neurofilament, heavy polypeptide 200kDa 
IWS1                  0.043   IWS1 homolog 
TTN                   0.040   titin isoform N2-A 
PRG4                  0.040   proteoglycan 4 isoform D 
PRG4                  0.040   proteoglycan 4 isoform C 
PRG4                  0.040   proteoglycan 4 isoform B 
PRG4                  0.040   proteoglycan 4 isoform A 
TCHH                  0.039   trichohyalin 
MAP1B                 0.039   microtubule-associated protein 1B 
FSCB                  0.037   fibrous sheath CABYR binding protein 
NEFM                  0.037   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.037   neurofilament, medium polypeptide 150kDa isoform 2 ...
LOC283685             0.036   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CALD1                 0.032   caldesmon 1 isoform 1 
LOC100133758          0.031   PREDICTED: hypothetical protein, partial 
AEBP1                 0.031   adipocyte enhancer binding protein 1 precursor [Homo...
LOC727832             0.031   golgi autoantigen, golgin subfamily a-like 
MLL2                  0.030   myeloid/lymphoid or mixed-lineage leukemia 2 
LOC283685             0.030   PREDICTED: golgi autoantigen, golgin subfamily a-li...
RBM12B                0.030   RNA binding motif protein 12B 
LOC440243             0.029   PREDICTED: Putative golgin subfamily A member 6-lik...
MYST4                 0.029   MYST histone acetyltransferase (monocytic leukemia)...
TXNDC2                0.029   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.029   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.029   thioredoxin domain-containing 2 isoform 1 
INCENP                0.029   inner centromere protein antigens 135/155kDa isofor...
EIF5B                 0.028   eukaryotic translation initiation factor 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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