HOXA3 3480

Name: HOXA3	Sequence: fasta or formatted (443aa)		NCBI GI: 13562112
Description: homeobox A3 isoform a		Referenced in: HOX Genes T cells
Other entries for this name: alt mRNA [443aa] homeobox A3 isoform a alt prot [285aa] homeobox A3 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 49 2 C cysteine 1.1 5 1 D aspartate 1.8 8 1 E glutamate 3.4 15 1 F phenylalanine 1.8 8 1 G glycine 9.9 44 2 H histidine 4.1 18 3 I isoleucine 1.4 6 1 K lysine 4.3 19 2 L leucine 6.3 28 2 M methionine 1.8 8 1 N asparagine 3.8 17 2 P proline 16.9 75 5 Q glutamine 6.1 27 2 R arginine 3.4 15 2 S serine 11.1 49 5 T threonine 4.5 20 1 V valine 2.0 9 1 W tryptophan 0.5 2 1 Y tyrosine 4.7 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox A3 isoform a HOXA3 1.000 homeobox A3 isoform a HOXA3 0.633 homeobox A3 isoform b HOXB3 0.420 homeobox B3 HOXD3 0.411 homeobox D3 HOXB4 0.129 homeobox B4 HOXB2 0.121 homeobox B2 PDX1 0.113 pancreatic and duodenal homeobox 1 HOXB5 0.111 homeobox B5 HOXD4 0.111 homeobox D4 HOXA2 0.106 homeobox A2 HOXA4 0.106 homeobox A4 HOXC4 0.099 homeobox C4 HOXC4 0.099 homeobox C4 HOXA5 0.095 homeobox A5 HOXC5 0.090 homeobox C5 BARHL2 0.089 BarH-like homeobox 2 HOXD8 0.087 homeobox D8 NKX1-1 0.084 PREDICTED: NK1 homeobox 1 HOXB1 0.084 homeobox B1 HOXD1 0.081 homeobox D1 HOXC6 0.080 homeobox C6 isoform 2 HOXC6 0.080 homeobox C6 isoform 1 NKX1-1 0.079 PREDICTED: NK1 homeobox 1 CDX2 0.079 caudal type homeobox 2 CDX1 0.078 caudal type homeobox 1 HOXA6 0.078 homeobox A6 GSX1 0.077 GS homeobox 1 HOXA7 0.075 homeobox A7 HOXA9 0.075 homeobox A9 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.