Guide to the Human Genome
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Name: TXNDC2 Sequence: fasta or formatted (553aa) NCBI GI: 148727319
Description:

thioredoxin domain-containing 2 isoform 2

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [486aa] thioredoxin domain-containing 2 isoform 1
alt prot [486aa] thioredoxin domain-containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         37           1
 C cysteine            1.1          6           1
 D aspartate           6.1         34           2
 E glutamate          14.5         80           3
 F phenylalanine       2.0         11           2
 G glycine             4.7         26           1
 H histidine           0.9          5           1
 I isoleucine          7.6         42           1
 K lysine             13.4         74           2
 L leucine             5.6         31           2
 M methionine          1.3          7           1
 N asparagine          1.4          8           1
 P proline            11.9         66           2
 Q glutamine           4.7         26           1
 R arginine            1.1          6           1
 S serine              9.8         54           2
 T threonine           3.1         17           1
 V valine              3.8         21           2
 W tryptophan          0.2          1           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.883   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.883   thioredoxin domain-containing 2 isoform 1 
TXN                   0.104   thioredoxin 
NEFH                  0.077   neurofilament, heavy polypeptide 200kDa 
PRAM1                 0.075   PML-RARA regulated adaptor molecule 1 
TTN                   0.074   titin isoform N2-A 
TXNDC8                0.055   thioredoxin domain containing 8 
C6orf10               0.052   chromosome 6 open reading frame 10 
MAP1B                 0.048   microtubule-associated protein 1B 
RP1L1                 0.048   retinitis pigmentosa 1-like 1 
NACA                  0.047   nascent polypeptide-associated complex alpha subuni...
TXNL1                 0.046   thioredoxin-like 1 
SPEN                  0.044   spen homolog, transcriptional regulator 
TGOLN2                0.042   trans-golgi network protein 2 
MLL2                  0.041   myeloid/lymphoid or mixed-lineage leukemia 2 
TRDN                  0.041   triadin 
PRG4                  0.037   proteoglycan 4 isoform D 
PRG4                  0.037   proteoglycan 4 isoform C 
PRG4                  0.037   proteoglycan 4 isoform B 
PRG4                  0.037   proteoglycan 4 isoform A 
C14orf174             0.036   hypothetical protein LOC161394 
NEFM                  0.035   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.035   neurofilament, medium polypeptide 150kDa isoform 2 ...
RBBP6                 0.035   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.035   retinoblastoma-binding protein 6 isoform 1 
C1orf113              0.035   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.035   SH3 domain-containing protein C1orf113 isoform 2 [H...
ZAN                   0.035   zonadhesin isoform 3 
ZAN                   0.035   zonadhesin isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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