| Name: LOC338756 | Sequence: fasta or formatted (166aa) | NCBI GI: 169204941 | |
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Description: PREDICTED: similar to Nucleolar protein 5A
| Not currently referenced in the text | ||
Other entries for this name:
alt mRNA {166aa} PREDICTED: hypothetical protein alt mRNA {166aa} PREDICTED: similar to Nucleolar protein 5A | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.6 6 2 C cysteine 0.6 1 1 D aspartate 3.6 6 1 E glutamate 14.5 24 2 F phenylalanine 3.0 5 1 G glycine 5.4 9 2 H histidine 1.8 3 1 I isoleucine 0.6 1 1 K lysine 17.5 29 5 L leucine 2.4 4 2 M methionine 1.8 3 1 N asparagine 3.6 6 1 P proline 7.2 12 1 Q glutamine 3.6 6 1 R arginine 2.4 4 1 S serine 15.1 25 3 T threonine 7.2 12 1 V valine 5.4 9 1 W tryptophan 0.0 0 0 Y tyrosine 0.6 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to Nucleolar protein 5A LOC338756 1.000 PREDICTED: similar to Nucleolar protein 5A LOC338756 1.000 PREDICTED: hypothetical protein NOP56 0.619 nucleolar protein 5A LOC402360 0.463 PREDICTED: similar to hCG1742476 LOC402360 0.463 PREDICTED: similar to hCG1742476 LOC402360 0.463 PREDICTED: hypothetical protein LOC402360 GTF2F1 0.091 general transcription factor IIF, polypeptide 1, 74... CHD4 0.072 chromodomain helicase DNA binding protein 4 TXNDC2 0.068 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.068 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.068 thioredoxin domain-containing 2 isoform 1 MAP1B 0.065 microtubule-associated protein 1B DDX21 0.062 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 LOC100294088 0.059 PREDICTED: hypothetical protein, partial TCHHL1 0.059 trichohyalin-like 1 NEFH 0.059 neurofilament, heavy polypeptide 200kDa LIG1 0.055 DNA ligase I FAM133A 0.055 hypothetical protein LOC286499 RBMX2 0.055 RNA binding motif protein, X-linked 2 SFRS4 0.052 splicing factor, arginine/serine-rich 4 NEFM 0.052 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.052 neurofilament, medium polypeptide 150kDa isoform 2 ... FAM133B 0.052 hypothetical protein LOC257415 isoform 2 FAM133B 0.052 hypothetical protein LOC257415 isoform 1 MYST3 0.052 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.052 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.052 MYST histone acetyltransferase (monocytic leukemia)... CHD2 0.052 chromodomain helicase DNA binding protein 2 isoform... AP3D1 0.049 adaptor-related protein complex 3, delta 1 subunit ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
