Guide to the Human Genome
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Name: GPRIN1 Sequence: fasta or formatted (1008aa) NCBI GI: 112821681
Description:

G protein-regulated inducer of neurite outgrowth 1

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1        112           3
 C cysteine            1.4         14           2
 D aspartate           5.4         54           2
 E glutamate           6.8         69           2
 F phenylalanine       1.3         13           2
 G glycine            11.1        112           2
 H histidine           0.7          7           1
 I isoleucine          0.9          9           1
 K lysine              7.4         75           2
 L leucine             5.3         53           2
 M methionine          2.0         20           1
 N asparagine          0.7          7           1
 P proline            13.0        131           4
 Q glutamine           2.6         26           2
 R arginine            5.3         53           2
 S serine             13.0        131           4
 T threonine           5.1         51           3
 V valine              6.2         63           2
 W tryptophan          0.4          4           1
 Y tyrosine            0.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-regulated inducer of neurite outgrowth 1 ... 
MUC4                  0.050   mucin 4 isoform a 
GPRIN2                0.044   G protein-regulated inducer of neurite outgrowth 2 ...
TCOF1                 0.042   Treacher Collins-Franceschetti syndrome 1 isoform d...
NACA                  0.042   nascent polypeptide-associated complex alpha subuni...
PRG4                  0.040   proteoglycan 4 isoform D 
PRG4                  0.040   proteoglycan 4 isoform C 
PRG4                  0.040   proteoglycan 4 isoform B 
PRG4                  0.040   proteoglycan 4 isoform A 
TCOF1                 0.040   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.040   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.038   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.038   Treacher Collins-Franceschetti syndrome 1 isoform b ...
GPRIN3                0.038   G protein-regulated inducer of neurite outgrowth 3 ...
DPCR1                 0.035   diffuse panbronchiolitis critical region 1 protein ...
TCOF1                 0.035   Treacher Collins-Franceschetti syndrome 1 isoform c ...
LOC100290496          0.035   PREDICTED: hypothetical protein XP_002348126 
COL1A1                0.034   alpha 1 type I collagen preproprotein 
RP1L1                 0.031   retinitis pigmentosa 1-like 1 
COL5A2                0.027   alpha 2 type V collagen preproprotein 
LOC100294236          0.026   PREDICTED: similar to diffuse panbronchiolitis crit...
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
COL2A1                0.024   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.024   collagen, type II, alpha 1 isoform 2 precursor [Hom...
MARCKS                0.024   myristoylated alanine-rich protein kinase C substra...
MAPT                  0.024   microtubule-associated protein tau isoform 1 
COL7A1                0.024   alpha 1 type VII collagen precursor 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
CIC                   0.023   capicua homolog 
LOC100133915          0.023   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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