Guide to the Human Genome
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Name: GPRIN2 Sequence: fasta or formatted (458aa) NCBI GI: 112821688
Description:

G protein-regulated inducer of neurite outgrowth 2

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.8         63           3
 C cysteine            2.8         13           2
 D aspartate           2.8         13           1
 E glutamate           6.6         30           3
 F phenylalanine       0.7          3           1
 G glycine             9.4         43           2
 H histidine           3.1         14           1
 I isoleucine          0.7          3           1
 K lysine              2.2         10           1
 L leucine             9.6         44           2
 M methionine          2.4         11           1
 N asparagine          0.9          4           1
 P proline             9.2         42           2
 Q glutamine           5.2         24           1
 R arginine            6.1         28           2
 S serine             12.4         57           4
 T threonine           4.4         20           3
 V valine              5.7         26           1
 W tryptophan          2.0          9           2
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-regulated inducer of neurite outgrowth 2 ... 
GPRIN1                0.097   G protein-regulated inducer of neurite outgrowth 1 ...
GPRIN3                0.054   G protein-regulated inducer of neurite outgrowth 3 ...
KRTAP4-6              0.017   PREDICTED: keratin associated protein 4.6 
PRR12                 0.016   proline rich 12 
ZNF385C               0.016   PREDICTED: zinc finger protein 385C 
ZNF385C               0.016   PREDICTED: zinc finger protein 385C 
ZNF385C               0.016   PREDICTED: zinc finger protein 385C 
LOC100290359          0.014   PREDICTED: hypothetical protein XP_002346414 
LOC100287202          0.014   PREDICTED: hypothetical protein XP_002342114 
CACNA1H               0.013   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.013   calcium channel, voltage-dependent, T type, alpha 1H...
ANKRD56               0.013   ankyrin repeat domain 56 
LOC100292655          0.013   PREDICTED: similar to armadillo repeat containing, ...
CREBBP                0.012   CREB binding protein isoform b 
CREBBP                0.012   CREB binding protein isoform a 
SYN1                  0.012   synapsin I isoform Ia 
SYN1                  0.012   synapsin I isoform Ib 
MLLT1                 0.011   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ARHGEF17              0.011   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
ANKRD57               0.011   ankyrin repeat domain 57 
BASP1                 0.011   brain abundant, membrane attached signal protein 1 [...
MN1                   0.011   meningioma  1 
KRTAP4-9              0.010   PREDICTED: keratin associated protein 4-9 
SF1                   0.010   splicing factor 1 isoform 2 
SF1                   0.010   splicing factor 1 isoform 1 
PRB4                  0.010   proline-rich protein BstNI subfamily 4 precursor [Ho...
PPP1R13L              0.010   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.010   protein phosphatase 1, regulatory subunit 13 like [H...
BSN                   0.010   bassoon protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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