Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MINK1 Sequence: fasta or formatted (1312aa) NCBI GI: 68161546
Description:

misshapen/NIK-related kinase isoform 4

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1303aa] misshapen/NIK-related kinase isoform 2
alt prot [1332aa] misshapen/NIK-related kinase isoform 3
alt prot [1295aa] misshapen/NIK-related kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         77           2
 C cysteine            0.9         12           1
 D aspartate           5.6         73           2
 E glutamate           8.0        105           4
 F phenylalanine       2.1         28           2
 G glycine             7.5         99           3
 H histidine           2.5         33           2
 I isoleucine          4.4         58           2
 K lysine              5.7         75           2
 L leucine             7.5         99           2
 M methionine          2.1         28           1
 N asparagine          3.7         49           1
 P proline             8.1        106           3
 Q glutamine           6.7         88           8
 R arginine            7.8        102           3
 S serine              7.2         95           4
 T threonine           4.3         56           2
 V valine              5.7         75           2
 W tryptophan          1.1         15           1
 Y tyrosine            3.0         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   misshapen/NIK-related kinase isoform 4 
MINK1                 0.995   misshapen/NIK-related kinase isoform 3 
MINK1                 0.958   misshapen/NIK-related kinase isoform 1 
MINK1                 0.955   misshapen/NIK-related kinase isoform 2 
TNIK                  0.612   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.610   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.607   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.605   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.598   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.595   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.592   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.590   TRAF2 and NCK interacting kinase isoform 5 
MAP4K4                0.573   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.546   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.515   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.145   Nik related kinase 
MYO3A                 0.108   myosin IIIA 
MYO3B                 0.101   myosin IIIB isoform 1 
MYO3B                 0.101   myosin IIIB isoform 2 
STK4                  0.090   serine/threonine kinase 4 
MAP4K3                0.089   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.088   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.088   mitogen-activated protein kinase kinase kinase kinas...
STK25                 0.087   serine/threonine kinase 25 
STK3                  0.087   serine/threonine kinase 3 
MST4                  0.086   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.085   serine/threonine kinase 24 isoform b 
STK24                 0.085   serine/threonine kinase 24 isoform a 
MAP4K2                0.082   mitogen-activated protein kinase kinase kinase kinas...
SLK                   0.082   serine/threonine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press