Guide to the Human Genome
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Name: MINK1 Sequence: fasta or formatted (1332aa) NCBI GI: 27436917
Description:

misshapen/NIK-related kinase isoform 3

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1303aa] misshapen/NIK-related kinase isoform 2
alt prot [1312aa] misshapen/NIK-related kinase isoform 4
alt prot [1295aa] misshapen/NIK-related kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         80           2
 C cysteine            0.9         12           1
 D aspartate           5.5         73           2
 E glutamate           7.9        105           4
 F phenylalanine       2.1         28           2
 G glycine             7.4         99           3
 H histidine           2.6         34           2
 I isoleucine          4.4         58           2
 K lysine              5.7         76           2
 L leucine             7.6        101           2
 M methionine          2.1         28           1
 N asparagine          3.7         49           1
 P proline             8.3        110           3
 Q glutamine           6.7         89           8
 R arginine            7.8        104           3
 S serine              7.3         97           4
 T threonine           4.2         56           2
 V valine              5.9         78           2
 W tryptophan          1.1         15           1
 Y tyrosine            3.0         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   misshapen/NIK-related kinase isoform 3 
MINK1                 0.981   misshapen/NIK-related kinase isoform 4 
MINK1                 0.963   misshapen/NIK-related kinase isoform 1 
MINK1                 0.961   misshapen/NIK-related kinase isoform 2 
TNIK                  0.607   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.605   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.601   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.599   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.575   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.573   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.573   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.571   TRAF2 and NCK interacting kinase isoform 5 
MAP4K4                0.568   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.538   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.285   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.141   Nik related kinase 
MYO3A                 0.106   myosin IIIA 
MYO3B                 0.099   myosin IIIB isoform 1 
MYO3B                 0.099   myosin IIIB isoform 2 
STK4                  0.089   serine/threonine kinase 4 
MAP4K3                0.088   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.086   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.086   mitogen-activated protein kinase kinase kinase kinas...
STK25                 0.086   serine/threonine kinase 25 
STK3                  0.086   serine/threonine kinase 3 
MST4                  0.085   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.083   serine/threonine kinase 24 isoform b 
STK24                 0.083   serine/threonine kinase 24 isoform a 
MAP4K2                0.081   mitogen-activated protein kinase kinase kinase kinas...
MAP4K1                0.081   mitogen-activated protein kinase kinase kinase kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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