MED15 12817

Name: MED15	Sequence: fasta or formatted (748aa)		NCBI GI: 21312134
Description: mediator complex subunit 15 isoform b		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [788aa] mediator complex subunit 15 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 55 2 C cysteine 1.1 8 1 D aspartate 3.5 26 2 E glutamate 1.9 14 2 F phenylalanine 1.7 13 1 G glycine 3.6 27 2 H histidine 2.5 19 2 I isoleucine 2.7 20 2 K lysine 4.0 30 2 L leucine 9.0 67 2 M methionine 3.2 24 1 N asparagine 2.5 19 2 P proline 12.6 94 5 Q glutamine 20.6 154 16 R arginine 3.2 24 2 S serine 9.2 69 2 T threonine 3.9 29 1 V valine 5.9 44 2 W tryptophan 0.5 4 1 Y tyrosine 1.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 15 isoform b MED15 0.987 mediator complex subunit 15 isoform a LOC100133659 0.070 PREDICTED: similar to mediator complex subunit 15 [... ZNF853 0.069 zinc finger protein 853 MLL2 0.069 myeloid/lymphoid or mixed-lineage leukemia 2 PHC1 0.068 polyhomeotic 1-like MAML2 0.068 mastermind-like 2 LOC100127989 0.066 PREDICTED: similar to hCG2014450 LOC100127989 0.066 PREDICTED: hypothetical protein LOC100127989 LOC100127989 0.066 PREDICTED: similar to hCG2014450 FOXP2 0.060 forkhead box P2 isoform I FOXP2 0.059 forkhead box P2 isoform III MED12 0.059 mediator complex subunit 12 FOXP2 0.058 forkhead box P2 isoform II PAXIP1 0.057 PAX interacting protein 1 ARID1A 0.056 AT rich interactive domain 1A isoform a ARID1A 0.056 AT rich interactive domain 1A isoform b NCOA6 0.051 nuclear receptor coactivator 6 AAK1 0.051 AP2 associated kinase 1 TOX3 0.050 TOX high mobility group box family member 3 isoform... TOX3 0.050 TOX high mobility group box family member 3 isoform... MINK1 0.049 misshapen/NIK-related kinase isoform 4 CREBBP 0.047 CREB binding protein isoform b CREBBP 0.047 CREB binding protein isoform a MINK1 0.047 misshapen/NIK-related kinase isoform 3 MINK1 0.046 misshapen/NIK-related kinase isoform 2 MINK1 0.046 misshapen/NIK-related kinase isoform 1 EP400 0.045 E1A binding protein p400 TRERF1 0.042 transcriptional regulating factor 1 NCOA3 0.041 nuclear receptor coactivator 3 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.