Guide to the Human Genome
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Search of human proteins with 169214872

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169214872 PREDICTED: hypothetical protein [Homo sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169214872 PREDICTED: hypothetical protein [Homo sapiens]           606   e-174
gi|113429040 PREDICTED: hypothetical protein [Homo sapiens]           603   e-173
gi|113428887 PREDICTED: hypothetical protein [Homo sapiens]           600   e-172
gi|134244285 Notch homolog 3 [Homo sapiens]                            37   0.020
gi|9945318 MAX binding protein [Homo sapiens]                          35   0.098
gi|148727370 immediate early response 5-like [Homo sapiens]            35   0.098
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]      34   0.13 
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]      34   0.13 
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ...    34   0.13 
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ...    34   0.13 
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]            34   0.17 
gi|145312251 EPH receptor A6 isoform a [Homo sapiens]                  34   0.17 
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom...    33   0.28 
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom...    33   0.28 
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap...    33   0.28 
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin...    33   0.28 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    33   0.37 
gi|98986461 neurogenic differentiation 2 [Homo sapiens]                33   0.37 
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     33   0.37 
gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    32   0.48 
gi|41281612 zinc finger protein 828 [Homo sapiens]                     32   0.48 
gi|134031945 SCO-spondin [Homo sapiens]                                32   0.48 
gi|32140182 keratin associated protein 10-10 [Homo sapiens]            32   0.48 
gi|223941923 OTU domain containing 1 [Homo sapiens]                    32   0.63 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   0.63 
gi|39812378 RAN binding protein 9 [Homo sapiens]                       32   0.83 
gi|169208819 PREDICTED: similar to kinase D-interacting substrat...    32   0.83 
gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]            32   0.83 
gi|169208593 PREDICTED: similar to kinase D-interacting substrat...    32   0.83 

>gi|169214872 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score =  606 bits (1562), Expect = e-174
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
           MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1   MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60

Query: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
           QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120

Query: 121 GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
           GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180

Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
           CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240

Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
           THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284


>gi|113429040 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score =  603 bits (1555), Expect = e-173
 Identities = 283/284 (99%), Positives = 283/284 (99%)

Query: 1   MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
           MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1   MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60

Query: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
           QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120

Query: 121 GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
           GAPAVSCKPQAA PLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180

Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
           CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240

Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
           THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284


>gi|113428887 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score =  600 bits (1547), Expect = e-172
 Identities = 282/284 (99%), Positives = 282/284 (99%)

Query: 1   MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
           MWLQAVSLQLMIHLTARGTDEIKAQR YTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1   MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60

Query: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
           QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61  QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120

Query: 121 GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
           GAPAVSCKPQAA PLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180

Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
           CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240

Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
           THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284


>gi|134244285 Notch homolog 3 [Homo sapiens]
          Length = 2321

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 24/86 (27%), Positives = 38/86 (44%)

Query: 68   GSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAVSC 127
            G+  + P+ R  RV        P+     ++    PP  + W  ++P P+ A GA A + 
Sbjct: 2225 GAHSSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSESTPSPATATGAMATTT 2284

Query: 128  KPQAAEPLPLCWVESWPIADTEFRPE 153
                A+PLPL    S   A T+  P+
Sbjct: 2285 GALPAQPLPLSVPSSLAQAQTQLGPQ 2310


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 32/88 (36%), Positives = 34/88 (38%), Gaps = 25/88 (28%)

Query: 63  PVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLP-----S 117
           P  PP  A  AP T    VIP           VTN PQ  PPP  +   A PLP      
Sbjct: 74  PAPPPPLATPAPLT----VIPIPV--------VTNSPQPLPPPPPLPAAAQPLPLAPRQP 121

Query: 118 LACGAPAVSCK--------PQAAEPLPL 137
              GAP +S K        PQ   P PL
Sbjct: 122 ALVGAPGLSIKEPAPLPSRPQVPTPAPL 149



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 10/45 (22%)

Query: 103 PPPCAVWPLASPLPSLACGAPAVSCKPQ----------AAEPLPL 137
           PPP    PLA+P P      P V+  PQ          AA+PLPL
Sbjct: 72  PPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPL 116


>gi|148727370 immediate early response 5-like [Homo sapiens]
          Length = 404

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 41  HHAGAAGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQ 100
           H A   G  L   Q     L  P+ PP  A   PR       PRA + C A       P 
Sbjct: 166 HGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRD------PRAPAACSAP------PG 213

Query: 101 ICPPPCAVWPLASPLPSLACG 121
             PP  A  P ASP P+ + G
Sbjct: 214 AAPPAAAASPPASPAPASSPG 234



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 11/98 (11%)

Query: 40  CHHAGAAGTDLSHRQALRGLLQCP-VQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNY 98
           C  A AAG       AL  L  C  +QPP     AP  RG  + P      P        
Sbjct: 137 CAAAAAAGAPAGGAGALSELPGCAALQPP---HGAPH-RGQPLEPLQPGPAPLPL----- 187

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLP 136
           P   P P A+ P   P    AC AP  +  P AA   P
Sbjct: 188 PLPPPAPAALCP-RDPRAPAACSAPPGAAPPAAAASPP 224


>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 25/91 (27%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAG 158
           P IC P C+V     P+ S A     V C P + +P+ LC                    
Sbjct: 156 PAICEPSCSVSSCCQPVGSEATSCQPVLCVPTSCQPV-LC-------------------- 194

Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
               + SC +  +  P  C   C LP +  P
Sbjct: 195 ----KSSCCQPVVCEPSCCSAVCTLPSSCQP 221



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPL----PLCWVESWPIADTE---FR 151
           P +C P C      +P  S+     AV C P   EP      +C   +      E    R
Sbjct: 221 PVVCEPSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPTCSESSICQPATCVALVCEPVCLR 280

Query: 152 PEGRKAGQVEE---EQSCEEESLGSPQLCQRFCDLPEALGPSL 191
           P        E      +C+E S     +CQ  C  P    P++
Sbjct: 281 PVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAV 323


>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
          Length = 517

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 25/91 (27%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAG 158
           P IC P C+V     P+ S A     V C P + +P+ LC                    
Sbjct: 156 PAICEPSCSVSSCCQPVGSEATSCQPVLCVPTSCQPV-LC-------------------- 194

Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
               + SC +  +  P  C   C LP +  P
Sbjct: 195 ----KSSCCQPVVCEPSCCSAVCTLPSSCQP 221



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPL----PLCWVESWPIADTE---FR 151
           P +C P C      +P  S+     AV C P   EP      +C   +      E    R
Sbjct: 221 PVVCEPSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPSCSESSICQPATCVALVCEPVCLR 280

Query: 152 PEGRKAGQVEEEQ---SCEEESLGSPQLCQRFCDLPEALGPSL 191
           P        E      +C+E S     +CQ  C  P    P++
Sbjct: 281 PVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAV 323


>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
           sapiens]
          Length = 517

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 25/91 (27%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAG 158
           P IC P C+V     P+ S A     V C P + +P+ LC                    
Sbjct: 156 PAICEPSCSVSSCCQPVGSEATSCQPVLCVPTSCQPV-LC-------------------- 194

Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
               + SC +  +  P  C   C LP +  P
Sbjct: 195 ----KSSCCQPVVCEPSCCSAVCTLPSSCQP 221



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 99  PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPL----PLCWVESWPIADTE---FR 151
           P +C P C      +P  S+     AV C P   EP      +C   +      E    R
Sbjct: 221 PVVCEPSCCQPVCPTPTCSVTSSCQAVCCDPSPCEPSCSESSICQPATCVALVCEPVCLR 280

Query: 152 PEGRKAGQVEEEQ---SCEEESLGSPQLCQRFCDLPEALGPSL 191
           P        E      +C+E S     +CQ  C  P    P++
Sbjct: 281 PVCCVQSSCEPPSVPSTCQEPSCCVSSICQPICSEPSPCSPAV 323


>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
           isoform 1 [Homo sapiens]
          Length = 666

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 58  GLLQCPVQPPGSARAAPRTRGDRVIP--RATSGCP-AEARVTNYPQICPPPCAVWPLASP 114
           G L CP   P S   AP  R   ++   R  SG P AE  ++  P  C  P  + PL+SP
Sbjct: 430 GPLPCPSPAPFSPLPAPSPRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSP 489

Query: 115 LPSLACGAPAV---SCKPQAAEPLPL 137
            P ++    +V   S  P+A  P P+
Sbjct: 490 SPRISDILNSVRRGSGTPEAEGPSPV 515


>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 9/81 (11%)

Query: 67  PGSARAAPRTRGDRVI----PRATSGCPAEA----RVTNYPQICPPPCAVW-PLASPLPS 117
           P S    P  R    I    PR  S  P       RV++ P    PPC V  PL    P 
Sbjct: 474 PNSPATVPGARRSPQILLWAPRHVSSPPPRVQPPCRVSSPPPRVQPPCRVSSPLPRVQPP 533

Query: 118 LACGAPAVSCKPQAAEPLPLC 138
            AC AP +  +P A    P C
Sbjct: 534 AACPAPLLRVQPPAVSSPPAC 554


>gi|145312251 EPH receptor A6 isoform a [Homo sapiens]
          Length = 1130

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 100 QICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQ 159
           Q   PP A    +SP P  A  + A +  P   +P P C V   P      RP    AG+
Sbjct: 2   QFPSPPAA---RSSPAPQAASSSEAAA--PATGQPGPSCPV---PGTSRRGRPGTPPAGR 53

Query: 160 VEEEQSCEEESLG-SPQLCQRFC 181
           VEEE+  EEE +   P   Q  C
Sbjct: 54  VEEEEEEEEEDVDKDPHPTQNTC 76


>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 62  CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
           CP +   +A A+PR           S   A+ R    P   P P    PL  P P L   
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413

Query: 122 APAVSCKPQAAEP 134
           AP + C  +AA P
Sbjct: 414 APPLPCAQKAAHP 426



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 66  PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
           PP S    P T    + P+A  G     + T  P I PP   +WP   P  +L    PA 
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671

Query: 126 SCKPQAAEPLPLCWVESWPIADT 148
             K  +    PL       IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694


>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 62  CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
           CP +   +A A+PR           S   A+ R    P   P P    PL  P P L   
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413

Query: 122 APAVSCKPQAAEP 134
           AP + C  +AA P
Sbjct: 414 APPLPCAQKAAHP 426



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 66  PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
           PP S    P T    + P+A  G     + T  P I PP   +WP   P  +L    PA 
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671

Query: 126 SCKPQAAEPLPLCWVESWPIADT 148
             K  +    PL       IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694


>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
           sapiens]
          Length = 1188

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 62  CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
           CP +   +A A+PR           S   A+ R    P   P P    PL  P P L   
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413

Query: 122 APAVSCKPQAAEP 134
           AP + C  +AA P
Sbjct: 414 APPLPCAQKAAHP 426



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 66  PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
           PP S    P T    + P+A  G     + T  P I PP   +WP   P  +L    PA 
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671

Query: 126 SCKPQAAEPLPLCWVESWPIADT 148
             K  +    PL       IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694


>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
           isoform a [Homo sapiens]
          Length = 1749

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 40/132 (30%)

Query: 63  PVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGA 122
           PV  PG   AAP   G  V   +  G P           CPPP A         S A G+
Sbjct: 732 PVPGPGPQGAAPEPLGASVQRDSAQGRP-----------CPPPQAPANQPEGASSAAPGS 780

Query: 123 PAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRFCD 182
           P V   P  A  LP   VE  P    E  P G  +G +                      
Sbjct: 781 P-VPAPPTKASALP---VEQGP---AEPIPPGVASGGLR--------------------- 812

Query: 183 LPEALGPSLSHH 194
            P+ALGP+ +HH
Sbjct: 813 -PDALGPTTAHH 823


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 53  RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPP------- 104
           R A R L          AR+ P  RG    P   S   P   +    PQ+ PP       
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295

Query: 105 --PCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIA 146
             P +  PLA+P PS     P V     AA PLP     S P+A
Sbjct: 296 LGPLSSSPLATPSPSGTKARP-VPPPDNAATPLPATLPPSPPLA 338



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 60  LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
           +Q P  PP S   +P        P + +  P +      A     P   PPP A  PLA+
Sbjct: 673 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732

Query: 114 PLPSLACGAPAVSCKPQAAEPLP 136
           P   +    PA      +A P P
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPP 755


>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
          Length = 382

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 12/69 (17%)

Query: 103 PPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEE 162
           PPP        P P+   GAP  +   +AA+P+PL   E       E + EG   G+ EE
Sbjct: 37  PPP--------PPPAPGPGAPGPA---RAAKPVPLRGEEGTEATLAEVKEEGELGGEEEE 85

Query: 163 EQSCEEESL 171
           E+  EEE L
Sbjct: 86  EEE-EEEGL 93


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 16/91 (17%)

Query: 50  LSHRQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVW 109
           +S+R A R      VQPP      P        PRA  G PA A     P    PP    
Sbjct: 91  ISYRNAAR------VQPPRRGATPPAP------PRAPRGAPAAAAAAAPPPTPAPPPPPA 138

Query: 110 PLASPLPSLACGAPAVSC----KPQAAEPLP 136
           P+A+  P+ A  A A +      P  A+P P
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPGP 169


>gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 9/81 (11%)

Query: 67  PGSARAAPRTRGDRVI----PRATSGCPAEAR----VTNYPQICPPPCAVW-PLASPLPS 117
           P S    P  R    I    PR  S  P   +    V++ P    PPC V  PL    P 
Sbjct: 474 PNSPATVPGARRSPQILLWAPRHVSSPPPRVQPPCHVSSPPPRVQPPCRVSSPLPRVQPP 533

Query: 118 LACGAPAVSCKPQAAEPLPLC 138
            AC AP +  +P A    P C
Sbjct: 534 AACPAPLLRVQPPAVSSPPAC 554


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 1/93 (1%)

Query: 53  RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPPPCAVWPL 111
           R A R L          AR+ P  RG    P   S   P   +    PQ+ PP     P 
Sbjct: 227 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 286

Query: 112 ASPLPSLACGAPAVSCKPQAAEPLPLCWVESWP 144
             PL S     P+ S  P  + P  L  + S P
Sbjct: 287 LGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPP 319



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 60  LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
           +Q P  PP S   +P        P + +  P +      A     P   PPP A  PLA+
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 468

Query: 114 PLPSLA----CGAPAVSCKPQAAEPLP 136
           P   LA       PA++  P  A P P
Sbjct: 469 PPLQLAKPPPQAPPALATPPLQALPSP 495


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 111 LASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEES 170
           L +PLPS     PA    P+  + +P+C  ES  +A     PE +K   V  E      S
Sbjct: 167 LQTPLPSPEPSKPASVSSPEPPKSVPVC--ESQKLAPVP-SPEPQKPAPVSPESVKATLS 223

Query: 171 LGSPQLCQRFCDLPEALGP 189
              PQ    F   PE LGP
Sbjct: 224 NPKPQKQSHF---PETLGP 239


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 99   PQICPPPCAVWPLASPLPSLACGAPAVSCKPQA-AEPLPLCWVESWPIADTEFRPEGRKA 157
            P  CP P    P AS LP  + G+   +  P A A P P C    +     E  P G + 
Sbjct: 1525 PGHCPLPSLPTPPASTLPGPSPGSLDTASSPLASASPAPPCGPFEFRCGSGECTPRGWRC 1584

Query: 158  GQVEE-EQSCEEESLGSP 174
             Q E+     +E   G P
Sbjct: 1585 DQEEDCADGSDERGCGGP 1602


>gi|32140182 keratin associated protein 10-10 [Homo sapiens]
          Length = 251

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 25/111 (22%)

Query: 86  TSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAEPLPLCWVESWPI 145
           +S C    RV + P+ C  PC      +P PSL      VSC              S P 
Sbjct: 10  SSACTDSWRVVDCPESCCEPCC----CAPAPSLTLVCTPVSC-------------VSSPC 52

Query: 146 ADTEFRPEGRKAGQVE-------EEQSCEEESLGSPQLCQRFCDLPEALGP 189
             T   P   ++G          ++ SC+ +   S   CQ+ C +P    P
Sbjct: 53  CQTACEPSACQSGYTSSCTTPCYQQSSCQPDCCTSSP-CQQACCVPVCCVP 102


>gi|223941923 OTU domain containing 1 [Homo sapiens]
          Length = 481

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 34/106 (32%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 35  SRCCWCHHAGAAGTDLSHRQ--ALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE 92
           S  C  + AGA G   +     A     +  +QPPG+A AAP        P A +     
Sbjct: 5   SSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREA 64

Query: 93  ARVTNYPQICPPPC--AVWPLASPLPSLACGAPAVSCKPQAAEPLP 136
           A V          C   V   A+P  S A G P  SCKP    PLP
Sbjct: 65  AAVPAAKMPAFSSCFEVVSGAAAP-ASAAAGPPGASCKP----PLP 105


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 60  LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
           +Q P  PP S   +P        P + +  P +      A     P   PPP A  PLA+
Sbjct: 448 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 507

Query: 114 PLPSLA----CGAPAVSCKPQAAEPLP 136
           P   LA       PA++  P  A P P
Sbjct: 508 PPLQLAKPPPQAPPALATPPLQALPSP 534



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 53  RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPPPCAVWPL 111
           R A R L          AR+ P  RG    P   S   P   +    PQ+ PP     P 
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295

Query: 112 ASPLPS--LACGAPAVSCKPQAAEPLP 136
             PL S  LA  +P+ + + QA   LP
Sbjct: 296 LGPLSSSPLATPSPSAALQSQAPPTLP 322


>gi|39812378 RAN binding protein 9 [Homo sapiens]
          Length = 729

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 12/93 (12%)

Query: 44  GAAGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICP 103
           GA G  L    A   LL  P  PP  A AAP        P A++  PA            
Sbjct: 54  GAGGEGLG--AAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASG---------- 101

Query: 104 PPCAVWPLASPLPSLACGAPAVSCKPQAAEPLP 136
           PP      A P P+     PA+     AA P P
Sbjct: 102 PPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFP 134


>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 42/137 (30%), Positives = 54/137 (39%), Gaps = 19/137 (13%)

Query: 158 GQVEEEQSCEEESLGSPQLCQRFCDLPEALGPS-LSHHLWRKDLPLSGVF-YLYRSSDRS 215
           G+     +CE   L + QL  +F   PEA   +  S  +W        V  +L RS  R 
Sbjct: 84  GRTALSLACERGHLDAVQLLVQFSGDPEAADSAGNSPVMWAAACGHGAVLEFLVRSFRR- 142

Query: 216 ASLIGFPGKQTQRAGHAGGLLGSALTHSTC------EGGRVVWGAVMWGWNAGT------ 263
              +G    +T RAG     L +A  H TC        GR    A   G N+ +      
Sbjct: 143 ---LGLRLDRTNRAGLTALQLAAARGHGTCVQALTGPWGRAAAAAAARGSNSDSPPGRPA 199

Query: 264 PEASPELRGWNSPSELP 280
           P ASPE R   SP  LP
Sbjct: 200 PAASPEHRR-PSPRRLP 215


>gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 131

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 30  LAVRLSRCCWCHHAGA-------AGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVI 82
           LA RL R C    A A       AG+ L+H    R     P   P S R +P++   R +
Sbjct: 28  LAGRLGRQCVSRQAAAGSRGPLLAGSLLAHLAEQRQWWLVPPAQPPSYRQSPKSMSLRNL 87

Query: 83  PRATS--GCPAEARVTNYPQ 100
           P+ TS  G   E R+  +P+
Sbjct: 88  PQRTSPAGRQPEGRMRGFPR 107


>gi|169208593 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 42/137 (30%), Positives = 54/137 (39%), Gaps = 19/137 (13%)

Query: 158 GQVEEEQSCEEESLGSPQLCQRFCDLPEALGPS-LSHHLWRKDLPLSGVF-YLYRSSDRS 215
           G+     +CE   L + QL  +F   PEA   +  S  +W        V  +L RS  R 
Sbjct: 84  GRTALSLACERGHLDAVQLLVQFSGDPEAADSAGNSPVMWAAACGHGAVLEFLVRSFRR- 142

Query: 216 ASLIGFPGKQTQRAGHAGGLLGSALTHSTC------EGGRVVWGAVMWGWNAGT------ 263
              +G    +T RAG     L +A  H TC        GR    A   G N+ +      
Sbjct: 143 ---LGLRLDRTNRAGLTALQLAAARGHGTCVQALTGPWGRAAAAAAARGSNSDSPPGRPA 199

Query: 264 PEASPELRGWNSPSELP 280
           P ASPE R   SP  LP
Sbjct: 200 PAASPEHRR-PSPRRLP 215


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,141,771
Number of Sequences: 37866
Number of extensions: 821213
Number of successful extensions: 3140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 2964
Number of HSP's gapped (non-prelim): 327
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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